##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547480_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3060975 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27974093221931 31.0 31.0 33.0 30.0 34.0 2 31.687880495593724 31.0 31.0 34.0 30.0 34.0 3 31.74861702562092 31.0 31.0 34.0 30.0 34.0 4 35.54374864218101 37.0 35.0 37.0 33.0 37.0 5 35.43999019920123 37.0 35.0 37.0 33.0 37.0 6 35.49250908615719 37.0 35.0 37.0 33.0 37.0 7 35.95062030888851 37.0 35.0 37.0 35.0 37.0 8 35.99395094700218 37.0 35.0 37.0 35.0 37.0 9 37.72974852783835 39.0 37.0 39.0 35.0 39.0 10 37.03479838940207 39.0 37.0 39.0 33.0 39.0 11 36.78412956655968 39.0 37.0 39.0 32.0 39.0 12 36.57426244905626 39.0 35.0 39.0 32.0 39.0 13 36.53269268778739 39.0 35.0 39.0 32.0 39.0 14 37.64324308431137 40.0 36.0 41.0 32.0 41.0 15 37.72035086859579 40.0 36.0 41.0 32.0 41.0 16 37.73512687950735 40.0 36.0 41.0 32.0 41.0 17 37.65783451351285 40.0 36.0 41.0 32.0 41.0 18 37.50816128847834 39.0 36.0 41.0 32.0 41.0 19 37.40395756254135 39.0 36.0 41.0 32.0 41.0 20 37.24691152328915 39.0 35.0 41.0 32.0 41.0 21 37.1938960625291 39.0 35.0 41.0 32.0 41.0 22 37.12686611292153 39.0 35.0 41.0 32.0 41.0 23 37.0382270355034 39.0 35.0 41.0 31.0 41.0 24 36.95506464443519 39.0 35.0 41.0 31.0 41.0 25 36.85397985935854 39.0 35.0 41.0 31.0 41.0 26 36.72935616919445 38.0 35.0 40.0 31.0 41.0 27 36.6404962471108 38.0 35.0 40.0 31.0 41.0 28 36.51274936907358 38.0 35.0 40.0 30.0 41.0 29 36.535593724221854 38.0 35.0 40.0 30.0 41.0 30 36.453689102328504 38.0 35.0 40.0 30.0 41.0 31 36.339739135406205 38.0 35.0 40.0 30.0 41.0 32 36.19978895613326 38.0 35.0 41.0 30.0 41.0 33 36.01958003577292 38.0 35.0 41.0 29.0 41.0 34 35.81316410620799 38.0 35.0 41.0 27.0 41.0 35 35.66113542253694 38.0 35.0 41.0 27.0 41.0 36 35.60843424072395 38.0 35.0 41.0 26.0 41.0 37 35.55591404699483 38.0 35.0 41.0 26.0 41.0 38 35.42699760697163 38.0 35.0 41.0 25.0 41.0 39 35.34109621934188 38.0 34.0 40.0 25.0 41.0 40 35.2377092266353 38.0 34.0 40.0 24.0 41.0 41 35.1307563766447 38.0 34.0 40.0 24.0 41.0 42 35.083305482730175 38.0 34.0 40.0 24.0 41.0 43 35.06310668986189 38.0 34.0 40.0 24.0 41.0 44 34.934702178227525 38.0 34.0 40.0 24.0 41.0 45 34.81990378882546 38.0 34.0 40.0 23.0 41.0 46 34.80578573820433 38.0 34.0 40.0 23.0 41.0 47 34.762812175859 38.0 34.0 40.0 23.0 41.0 48 34.69308145280507 38.0 34.0 40.0 23.0 41.0 49 34.614112170141865 38.0 34.0 40.0 23.0 41.0 50 34.53829809129444 38.0 33.0 40.0 23.0 41.0 51 34.01477797107131 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 10.0 14 23.0 15 59.0 16 210.0 17 506.0 18 1140.0 19 2405.0 20 4080.0 21 6710.0 22 10576.0 23 16067.0 24 24695.0 25 37298.0 26 50719.0 27 57820.0 28 61748.0 29 67041.0 30 76452.0 31 91026.0 32 110919.0 33 138119.0 34 194437.0 35 254654.0 36 252438.0 37 314773.0 38 460874.0 39 825780.0 40 391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.511789544181184 24.376808043188852 28.14201357410629 15.969388838523674 2 32.29284786710117 25.645619451318613 28.830552356683736 13.23098032489648 3 27.019756776843977 25.029410563627604 34.983657168059196 12.967175491469222 4 23.673502723805324 27.613587174021347 34.37110724524049 14.341802856932839 5 22.25843072877106 31.860207940280468 32.13551237759211 13.745848953356365 6 21.147967559356086 40.275500453286945 28.719770661308896 9.856761326048073 7 87.43312179942664 2.4009996814740404 8.886580256290888 1.2792982628084189 8 87.76873381847288 1.9174609397332552 8.624964267921168 1.6888409738727037 9 81.92951592221432 5.805405140518952 10.113117552413856 2.151961384852865 10 29.853331046480285 45.088476710851936 15.022402992510555 10.03578925015722 11 24.638293354241707 24.87328383929957 33.012847213714586 17.475575592744143 12 25.436176381708442 23.591404699483007 32.04070598420438 18.93171293460417 13 23.006329682535792 25.037447218614982 33.695015477094714 18.261207621754505 14 19.031746420666618 28.312122771339197 33.149110985878686 19.507019822115502 15 17.574694337588515 27.401497888744597 36.954630469049896 18.069177304616993 16 21.981558163657006 26.649809292790692 34.43272160014374 16.935910943408555 17 20.711864683638385 26.53193835297577 32.13743986801591 20.61875709536994 18 21.11823846976862 26.17773748560508 33.74506488945516 18.958959155171147 19 22.281103243247657 27.897058943637237 31.27931459747303 18.542523215642078 20 23.5660206306814 27.9602087570137 31.06882610932791 17.404944502976992 21 23.01443167618161 26.686725634805903 32.86897148784293 17.42987120116956 22 22.104002809562314 24.59719533808672 33.06475877784039 20.23404307451057 23 19.320575960274095 27.899051772719474 32.91310775161509 19.86726451539134 24 18.923970303579743 27.98399202868367 34.09991914341019 18.992118524326397 25 20.179485294718187 28.746134809987012 31.864650969053976 19.20972892624082 26 19.840050964153576 30.13634544548714 30.512663448737737 19.510940141621543 27 18.95552887560336 28.79425673192365 32.711962691626034 19.538251700846953 28 17.822883231650046 28.93172926926878 33.94029680085593 19.30509069822524 29 18.92942608155898 27.03540538553892 33.61379952466126 20.421369008240838 30 19.691209500240937 27.269121766757326 33.49782340594092 19.541845327060823 31 20.91853086026511 27.35304927351579 31.580460474195316 20.147959392023786 32 20.928266320371776 27.722637394947686 31.651189571950113 19.697906712730422 33 20.48641364271188 27.723552136165765 31.836130644647536 19.953903576474815 34 18.887511332173574 28.1843203554423 32.047272519376996 20.880895793007127 35 18.875423680363284 28.382165813180443 31.432370404854666 21.31004010160161 36 20.56991644819053 29.102622530402893 30.32386739519271 20.00359362621387 37 19.581342546084173 29.469335750863696 30.675650732201344 20.27367097085079 38 19.548640547537957 29.840818693390176 30.403025179885496 20.20751557918637 39 19.84305654244154 28.617875023481083 30.48685467865631 21.052213755421068 40 20.917093409779564 28.694353923178074 30.820441199291075 19.56811146775129 41 18.7505288347667 28.885959539035767 30.610736775047165 21.75277485115037 42 20.02950040428295 29.025816937413733 29.59060430091719 21.35407835738613 43 19.86082865753559 28.632412874982645 30.6010013149405 20.905757152541266 44 20.19487254877939 28.8779555533776 30.330401261036105 20.596770636806898 45 19.40156322740303 28.994683066669936 30.095476114636675 21.508277591290355 46 20.07030439647498 28.641919649784793 30.164277721967675 21.123498231772555 47 19.300255637501124 29.082922924885047 30.62432721600144 20.992494221612397 48 19.282940893016114 28.29663750929034 31.130048432280567 21.290373165412984 49 19.81695374839716 27.78042943833256 31.025441240127737 21.377175573142544 50 18.56411764225451 28.11130440464231 31.771086010176496 21.55349194292668 51 18.3922769705731 28.4124502813646 31.25745881622686 21.937813931835446 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1744.0 1 2718.0 2 3692.0 3 33204.0 4 62716.0 5 41401.0 6 20086.0 7 20142.0 8 20198.0 9 21745.5 10 23293.0 11 24077.0 12 24861.0 13 25072.0 14 25283.0 15 25081.5 16 24880.0 17 24327.0 18 23774.0 19 23202.0 20 22630.0 21 22435.5 22 22241.0 23 24715.0 24 27189.0 25 29808.0 26 39332.5 27 46238.0 28 52342.0 29 58446.0 30 66802.5 31 75159.0 32 82829.0 33 90499.0 34 101002.0 35 111505.0 36 123859.5 37 136214.0 38 144027.0 39 151840.0 40 167456.0 41 183072.0 42 195524.0 43 207976.0 44 213492.0 45 219008.0 46 232935.5 47 246863.0 48 248037.5 49 249212.0 50 236025.0 51 222838.0 52 200481.5 53 178125.0 54 162370.0 55 146615.0 56 133404.0 57 120193.0 58 107478.0 59 94763.0 60 81278.5 61 67794.0 62 57816.0 63 47838.0 64 38774.5 65 29711.0 66 22970.0 67 16229.0 68 13041.5 69 9854.0 70 8046.0 71 6238.0 72 5094.5 73 3951.0 74 3133.5 75 2038.5 76 1761.0 77 1377.0 78 993.0 79 670.5 80 348.0 81 275.0 82 202.0 83 156.0 84 110.0 85 67.0 86 24.0 87 19.5 88 15.0 89 11.5 90 8.0 91 4.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3060975.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.041609792534622 #Duplication Level Percentage of deduplicated Percentage of total 1 75.4509502679325 16.630604042817037 2 8.073287122216032 3.5589648898196105 3 3.204579991270276 2.119023051496303 4 1.8266481627622233 1.610490641274208 5 1.183430911028192 1.3042361178653585 6 0.8858674963877393 1.1715567409960874 7 0.6780781001631947 1.0462153024862242 8 0.5490011059857994 0.9680694523047149 9 0.4493607695787061 0.8914171265214212 >10 5.721279041464559 29.9448590633128 >50 1.4380047607461577 22.200588064583545 >100 0.5334888555259267 15.883259444256856 >500 0.004065805083564635 0.6180910035732128 >1k 0.0018070244815842824 0.5825097794388295 >5k 0.0 0.0 >10k+ 1.5058537346535688E-4 1.4701152792538257 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44292 1.446989929679269 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06308447471802285 0.0 2 0.0 0.0 0.0 0.17830919886637428 0.0 3 0.0 0.0 0.0 0.2916391019201398 0.0 4 0.0 0.0 0.0 0.46926224487295715 0.0 5 0.0 0.0 0.0 0.791545177598641 0.0 6 0.0 0.0 0.0 1.3594687967069317 0.0 7 0.0 0.0 0.0 1.6626401718406716 0.0 8 0.0 0.0 0.0 2.301162211386895 0.0 9 0.0 0.0 0.0 2.5887176471549096 0.0 10 0.0 0.0 0.0 3.0183193263584314 0.0 11 0.0 0.0 0.0 3.454062839454749 0.0 12 0.0 0.0 0.0 3.822311518388749 0.0 13 0.0 0.0 0.0 4.010388846691005 0.0 14 0.0 0.0 0.0 4.1226406618806095 0.0 15 0.0 0.0 0.0 4.230841480247307 0.0 16 0.0 0.0 0.0 4.415031158372741 0.0 17 0.0 0.0 0.0 4.650675030014947 0.0 18 0.0 0.0 0.0 4.915884644598535 0.0 19 0.0 0.0 0.0 5.089293444082359 0.0 20 0.0 0.0 0.0 5.276750055129493 0.0 21 0.0 0.0 0.0 5.5032465145909395 0.0 22 0.0 0.0 0.0 5.766953340030546 0.0 23 0.0 0.0 0.0 6.041179689478025 0.0 24 0.0 0.0 0.0 6.2494139939071705 0.0 25 0.0 0.0 0.0 6.435302477151888 0.0 26 0.0 0.0 0.0 6.6166825929646595 0.0 27 0.0 0.0 0.0 6.8071447822997575 0.0 28 0.0 0.0 0.0 7.00734243174152 0.0 29 0.0 0.0 0.0 7.232532118034286 0.0 30 0.0 0.0 0.0 7.494540138354609 0.0 31 0.0 0.0 0.0 7.726557714453728 0.0 32 0.0 0.0 0.0 7.9564191148245245 0.0 33 0.0 0.0 0.0 8.17618569246727 0.0 34 0.0 0.0 0.0 8.417775382026969 0.0 35 3.266932921699785E-5 0.0 0.0 8.673641568454496 0.0 36 3.266932921699785E-5 0.0 0.0 8.918661537581979 0.0 37 3.266932921699785E-5 0.0 0.0 9.168712583408881 0.0 38 3.266932921699785E-5 0.0 0.0 9.449244113395242 0.0 39 3.266932921699785E-5 0.0 0.0 9.806287212407812 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGCG 40 6.8212103E-9 45.0 1 TACGTAC 40 6.8212103E-9 45.0 16 CGTTTTT 19750 0.0 43.17722 1 CGACGGT 415 0.0 40.66265 28 TACGGGA 1680 0.0 40.44643 4 TACGTAG 195 0.0 40.384617 1 CGGTCTA 420 0.0 40.17857 31 AGGGCGA 2695 0.0 39.239334 6 ACGGGAT 1840 0.0 38.88587 5 GGGCGAT 4960 0.0 38.785286 7 ATAGGGA 5945 0.0 38.49033 4 TATGGGA 5525 0.0 38.199097 4 CGCGTCA 65 9.094947E-12 38.076927 39 CGTATGG 390 0.0 38.076923 2 AGGGATT 7315 0.0 38.04853 6 GGCGATA 1160 0.0 37.62931 8 AAGGGAT 6350 0.0 37.275593 5 GCGCGAC 465 0.0 37.25806 9 TAGGGAT 6885 0.0 37.254898 5 TAGGGAC 4725 0.0 37.238094 5 >>END_MODULE