##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547479_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1560808 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27695462862825 31.0 31.0 33.0 30.0 34.0 2 31.691551427209497 31.0 31.0 34.0 30.0 34.0 3 31.781024956304684 31.0 31.0 34.0 30.0 34.0 4 35.6026731026494 37.0 35.0 37.0 33.0 37.0 5 35.49654922322284 37.0 35.0 37.0 33.0 37.0 6 35.54792133305314 37.0 35.0 37.0 33.0 37.0 7 35.88868842291941 37.0 35.0 37.0 35.0 37.0 8 35.914043239142806 37.0 35.0 37.0 35.0 37.0 9 37.6812599627885 39.0 37.0 39.0 35.0 39.0 10 37.05519128553929 39.0 37.0 39.0 33.0 39.0 11 36.891878437322205 39.0 37.0 39.0 32.0 39.0 12 36.546219650334955 39.0 35.0 39.0 32.0 39.0 13 36.45310954326221 39.0 35.0 39.0 32.0 39.0 14 37.48900185032368 40.0 36.0 41.0 32.0 41.0 15 37.583908462796195 40.0 36.0 41.0 32.0 41.0 16 37.60074973987832 40.0 36.0 41.0 32.0 41.0 17 37.53873634681524 40.0 36.0 41.0 32.0 41.0 18 37.39016330003434 39.0 36.0 41.0 32.0 41.0 19 37.27317389454693 39.0 36.0 41.0 32.0 41.0 20 37.09909803127611 39.0 35.0 41.0 32.0 41.0 21 37.05320385338876 39.0 35.0 41.0 31.0 41.0 22 36.995226831231 39.0 35.0 41.0 31.0 41.0 23 36.91647915694948 39.0 35.0 41.0 31.0 41.0 24 36.82655393872917 38.0 35.0 41.0 31.0 41.0 25 36.67354216534 38.0 35.0 40.0 31.0 41.0 26 36.580847868539884 38.0 35.0 40.0 31.0 41.0 27 36.501431950630696 38.0 35.0 40.0 30.0 41.0 28 36.39817133177175 38.0 35.0 40.0 30.0 41.0 29 36.408124509869246 38.0 35.0 40.0 30.0 41.0 30 36.33620278727428 38.0 35.0 40.0 30.0 41.0 31 36.18477480894511 38.0 35.0 40.0 30.0 41.0 32 36.03887089251209 38.0 35.0 40.0 29.0 41.0 33 35.837122182869386 38.0 35.0 41.0 28.0 41.0 34 35.5817192121004 38.0 35.0 41.0 26.0 41.0 35 35.39599297287046 38.0 34.0 41.0 25.0 41.0 36 35.32997652497937 38.0 34.0 41.0 25.0 41.0 37 35.28022601114294 38.0 34.0 41.0 25.0 41.0 38 35.167758622457086 38.0 34.0 40.0 24.0 41.0 39 35.05729276118523 38.0 34.0 40.0 24.0 41.0 40 34.94879959610663 38.0 34.0 40.0 23.0 41.0 41 34.82668335887566 38.0 34.0 40.0 23.0 41.0 42 34.79639007488429 38.0 34.0 40.0 23.0 41.0 43 34.77782405010738 38.0 34.0 40.0 23.0 41.0 44 34.6523557029436 38.0 34.0 40.0 23.0 41.0 45 34.53689819631883 38.0 33.0 40.0 23.0 41.0 46 34.52117749268328 38.0 33.0 40.0 23.0 41.0 47 34.48261349249876 38.0 33.0 40.0 23.0 41.0 48 34.41299826756398 37.0 33.0 40.0 23.0 41.0 49 34.32909813378711 37.0 33.0 40.0 23.0 41.0 50 34.254987801190154 37.0 33.0 40.0 23.0 41.0 51 33.737541068472225 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 1.0 12 5.0 13 3.0 14 16.0 15 51.0 16 138.0 17 312.0 18 698.0 19 1328.0 20 2386.0 21 3778.0 22 5878.0 23 8682.0 24 13372.0 25 20192.0 26 28312.0 27 33032.0 28 34567.0 29 36549.0 30 40337.0 31 47682.0 32 56951.0 33 71560.0 34 103690.0 35 128621.0 36 125705.0 37 159622.0 38 235244.0 39 401918.0 40 173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.707172182613107 24.24308435118221 28.420536030056226 16.62920743614846 2 32.56665778237938 25.723087016468394 28.839293494138936 12.87096170701329 3 27.50780365041696 24.86032875279983 34.75084699719632 12.881020599586881 4 24.31798145575881 27.657277512672923 33.978426558551725 14.04631447301654 5 22.341248891599736 31.52847755777777 32.30358891035925 13.826684640263249 6 21.075173884295825 40.1696429029067 28.932578510617578 9.822604702179897 7 87.43701980000102 2.4150952583533654 8.991048226303299 1.1568367153423098 8 87.84315559633215 2.1008990215324372 8.772699781139 1.283245600996407 9 82.03007672948883 5.775534210485851 10.002575589053874 2.1918134709714456 10 27.906443329352488 44.25931953193474 16.35678443472868 11.47745270398409 11 30.938590781185134 22.948754747541017 28.960576829437063 17.15207764183679 12 30.150665552713722 20.71017062957135 29.899962070927366 19.23920174678756 13 26.30278676172854 22.58234196646865 31.474723348419538 19.64014792338327 14 21.42896499761662 24.71950425676957 32.88597956955628 20.965551176057527 15 20.57242146375467 24.896592021568313 34.988928811231105 19.54205770344591 16 25.382173848416972 24.622759493800647 32.01258578889908 17.982480868883297 17 24.75493462360521 24.32996242971589 30.51374672605471 20.40135622062419 18 23.750583031352992 24.14762097580228 32.88726095714527 19.21453503569946 19 24.333614384344518 25.70642897781149 30.13637808109646 19.82357855674753 20 24.859623989625888 26.919134192033873 30.211018908155264 18.010222910184982 21 25.225908631939355 25.025884029297647 32.194927242812696 17.553280095950303 22 24.1353837243274 22.847973613666767 32.88078994982086 20.13585271218497 23 22.181587998011288 24.46265011455605 32.885018528864535 20.47074335856813 24 21.36982896038462 25.295167631124393 33.3437552857238 19.991248122767182 25 22.278653107877457 26.87652805469987 30.566347686582844 20.27847115083982 26 21.16045022834327 27.21109835418578 29.982803778555724 21.64564763891523 27 19.8704132731252 26.511588869354846 32.53455902327512 21.083438834244827 28 19.497273207210625 26.628195139953153 32.93960564015561 20.93492601268061 29 21.407565824880447 25.49371863803876 31.89886264037601 21.199852896704783 30 22.24110845151998 25.679327630304304 32.008036862958164 20.07152705521755 31 22.950420551406708 25.853147856751118 31.186154863378455 20.01027672846372 32 23.994815505814937 25.69681857089405 30.185134878857617 20.123231044433396 33 23.741485179471145 26.018574994490034 29.925461683948313 20.314478142090504 34 20.8694471068831 26.667661877694115 31.58767766438921 20.875213351033565 35 21.412563236477517 27.977304063023766 30.095373678248706 20.514759022250015 36 22.88116155222167 28.289962634737904 28.223714896386998 20.605160916653425 37 21.20042952111983 29.875551637357063 28.642216082951904 20.281802758571203 38 21.76289460330803 28.774583420894817 28.639076683358876 20.823445292438276 39 21.651221674927346 28.370818191603327 28.333273535245844 21.644686598223483 40 22.834134627705648 27.512544784496235 28.75984746362141 20.893473124176708 41 20.389183038528763 26.984036473416335 29.262535814783114 23.36424467327179 42 20.606442304242417 27.14382550576368 29.313022485789414 22.93670970420449 43 20.52257548654287 27.062713671380468 29.830959349260127 22.583751492816543 44 21.32677433739448 27.059189855510734 29.01567649576373 22.598359311331055 45 21.020714911763648 27.368196472596246 28.738256082746883 22.87283253289322 46 20.94709919477604 28.000369039625628 29.00991025161327 22.042621513985065 47 20.28859411279286 27.445336005453587 30.39592313724686 21.87014674450669 48 20.340490310147054 27.542337045940307 30.460505071732076 21.656667572180563 49 21.299929267405087 26.77651575337902 30.046232464210842 21.877322515005048 50 20.379252284714074 27.50274216944044 30.200960015581675 21.917045530263813 51 19.873104187062086 27.379344544620476 30.25855838770688 22.488992880610557 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 767.0 1 1319.5 2 1872.0 3 17550.5 4 33229.0 5 22443.5 6 11658.0 7 11502.5 8 11347.0 9 11653.0 10 11959.0 11 12009.5 12 12060.0 13 11639.5 14 11219.0 15 10734.0 16 10249.0 17 9833.5 18 9418.0 19 9022.0 20 8626.0 21 8699.0 22 8772.0 23 9391.0 24 10010.0 25 11404.5 26 14761.5 27 16724.0 28 19143.0 29 21562.0 30 25374.0 31 29186.0 32 33394.0 33 37602.0 34 42726.0 35 47850.0 36 53509.5 37 59169.0 38 62103.5 39 65038.0 40 71236.5 41 77435.0 42 82707.0 43 87979.0 44 93082.5 45 98186.0 46 101915.5 47 105645.0 48 109421.5 49 113198.0 50 111397.5 51 109597.0 52 105246.5 53 100896.0 54 96515.0 55 92134.0 56 89506.0 57 86878.0 58 81294.0 59 75710.0 60 66244.5 61 56779.0 62 50451.0 63 44123.0 64 37311.0 65 30499.0 66 24941.5 67 19384.0 68 15872.5 69 12361.0 70 9989.0 71 7617.0 72 6242.0 73 4867.0 74 3895.0 75 2302.0 76 1681.0 77 1314.5 78 948.0 79 720.5 80 493.0 81 350.5 82 208.0 83 135.5 84 63.0 85 53.0 86 43.0 87 29.0 88 15.0 89 16.5 90 18.0 91 14.0 92 10.0 93 5.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1560808.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.396776142314742 #Duplication Level Percentage of deduplicated Percentage of total 1 70.4011619171499 18.5836371128586 2 6.792523012271168 3.586014187928869 3 3.344988212660538 2.648907151448452 4 2.225209113998404 2.3495338740821756 5 1.7827737031565347 2.352973917731426 6 1.454102204603034 2.3030166229771587 7 1.209896710126851 2.2356160828779092 8 1.130816839739574 2.387993518125227 9 1.0005369103751691 2.376985396076691 >10 10.415891709696652 54.976451239046206 >50 0.2192847822011338 3.4287649673957437 >100 0.021588277915142177 1.1043643557862493 >500 4.90642442357582E-4 0.0675414400082771 >1k 4.90642442357582E-4 0.21803646069786095 >5k 0.0 0.0 >10k+ 2.45321221178791E-4 1.3801636729591658 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21313 1.3655106842097169 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2072 0.13275175421960933 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0369039625629802 0.0 2 0.0 0.0 0.0 0.09527116724158256 0.0 3 0.0 0.0 0.0 0.15434313509413072 0.0 4 0.0 0.0 0.0 0.2298168640857812 0.0 5 0.0 0.0 0.0 0.3826864034525707 0.0 6 0.0 0.0 0.0 0.6391561293893931 0.0 7 0.0 0.0 0.0 0.7861953552262674 0.0 8 0.0 0.0 0.0 1.0764937135124883 0.0 9 0.0 0.0 0.0 1.242753753184248 0.0 10 0.0 0.0 0.0 1.5229291495174295 0.0 11 0.0 0.0 0.0 1.7929175145181213 0.0 12 0.0 0.0 0.0 2.001527414006079 0.0 13 0.0 0.0 0.0 2.1285129240752227 0.0 14 0.0 0.0 0.0 2.2270516296687357 0.0 15 0.0 0.0 0.0 2.300539207897448 0.0 16 0.0 0.0 0.0 2.4059974064715197 0.0 17 0.0 0.0 0.0 2.523949134038267 0.0 18 0.0 0.0 0.0 2.663364103720637 0.0 19 0.0 0.0 0.0 2.7529330961912035 0.0 20 0.0 0.0 0.0 2.8568536296584846 0.0 21 0.0 0.0 0.0 2.9773040630237673 0.0 22 0.0 0.0 0.0 3.117487865259532 0.0 23 0.0 0.0 0.0 3.2654881317881506 0.0 24 0.0 0.0 0.0 3.3861307732917822 0.0 25 0.0 0.0 0.0 3.499277297399808 0.0 26 0.0 0.0 0.0 3.6058887448039734 0.0 27 0.0 0.0 0.0 3.7366543482606445 0.0 28 0.0 0.0 0.0 3.8622303319818965 0.0 29 0.0 0.0 0.0 4.010743153546112 0.0 30 0.0 0.0 0.0 4.189881138487245 0.0 31 0.0 0.0 0.0 4.335895254252925 0.0 32 0.0 0.0 0.0 4.479666941737869 0.0 33 0.0 0.0 0.0 4.621388409080425 0.0 34 0.0 0.0 0.0 4.791172264621914 0.0 35 0.0 0.0 0.0 4.9746669673656205 0.0 36 0.0 0.0 0.0 5.134263791574621 0.0 37 0.0 0.0 0.0 5.303535092080512 0.0 38 0.0 0.0 0.0 5.51547659929985 0.0 39 0.0 0.0 0.0 5.845946458500982 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTAA 25 3.8914503E-5 45.0 31 CGTTTTT 10610 0.0 42.836945 1 TATTGCG 125 0.0 39.6 1 AATGCGG 195 0.0 39.23077 2 GCGATCG 115 0.0 39.130436 9 AACGGGA 810 0.0 38.88889 4 TACGGGA 760 0.0 38.782894 4 GGGCGAT 2430 0.0 38.703705 7 ATAGGGA 3225 0.0 38.372093 4 TACGCGG 100 0.0 38.25 2 TTAGGGA 3095 0.0 38.093697 4 TAGGGAA 2115 0.0 38.08511 5 GACCGAT 965 0.0 38.00518 9 AAGGGAT 2970 0.0 37.5 5 AGGGATC 2190 0.0 37.19178 6 TCACGAC 200 0.0 37.125 25 AGGGCGA 1380 0.0 37.01087 6 TAGGGAT 3185 0.0 36.946625 5 TAAGGGA 2780 0.0 36.906475 4 GGCGATA 665 0.0 36.879696 8 >>END_MODULE