##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547477_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3102450 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.248623184902254 31.0 31.0 33.0 30.0 34.0 2 31.67512159744718 31.0 31.0 34.0 30.0 34.0 3 31.830854324807813 31.0 31.0 34.0 30.0 34.0 4 35.55954713210527 37.0 35.0 37.0 33.0 37.0 5 35.424959951006464 37.0 35.0 37.0 33.0 37.0 6 35.47606085513062 37.0 35.0 37.0 33.0 37.0 7 35.905973343647766 37.0 35.0 37.0 35.0 37.0 8 35.93952779255105 37.0 35.0 37.0 35.0 37.0 9 37.66009798707473 39.0 37.0 39.0 35.0 39.0 10 36.97839836258441 39.0 37.0 39.0 32.0 39.0 11 36.78993569598221 39.0 37.0 39.0 32.0 39.0 12 36.347672968138085 38.0 35.0 39.0 32.0 39.0 13 36.19760125062451 38.0 35.0 39.0 32.0 39.0 14 37.25092942674338 39.0 36.0 41.0 32.0 41.0 15 37.39839320536995 39.0 36.0 41.0 32.0 41.0 16 37.44805299037857 39.0 36.0 41.0 32.0 41.0 17 37.36823381521056 39.0 35.0 41.0 32.0 41.0 18 37.28627665232317 39.0 36.0 41.0 32.0 41.0 19 37.247903431159244 39.0 36.0 41.0 32.0 41.0 20 37.143285145610726 39.0 35.0 41.0 31.0 41.0 21 37.08756531128624 39.0 35.0 41.0 31.0 41.0 22 37.00838724234073 39.0 35.0 41.0 31.0 41.0 23 36.92497510032394 39.0 35.0 41.0 31.0 41.0 24 36.855236023143 39.0 35.0 41.0 31.0 41.0 25 36.74828635433287 38.0 35.0 41.0 31.0 41.0 26 36.60415929346162 38.0 35.0 40.0 31.0 41.0 27 36.509716514367675 38.0 35.0 40.0 30.0 41.0 28 36.41806475527406 38.0 35.0 40.0 30.0 41.0 29 36.46350948443972 38.0 35.0 40.0 30.0 41.0 30 36.417239278634625 38.0 35.0 40.0 30.0 41.0 31 36.322700124095476 38.0 35.0 40.0 30.0 41.0 32 36.28257538397073 38.0 35.0 40.0 30.0 41.0 33 36.212697061999386 38.0 35.0 41.0 30.0 41.0 34 36.09450079775661 38.0 35.0 41.0 29.0 41.0 35 36.006782381666106 38.0 35.0 41.0 29.0 41.0 36 35.96670051088656 38.0 35.0 41.0 29.0 41.0 37 35.92622540250447 38.0 35.0 41.0 29.0 41.0 38 35.83312414382182 38.0 35.0 41.0 28.0 41.0 39 35.738668794017634 38.0 35.0 40.0 28.0 41.0 40 35.65089042530903 38.0 35.0 40.0 27.0 41.0 41 35.55487115021999 38.0 34.0 40.0 27.0 41.0 42 35.5177566117101 38.0 34.0 40.0 27.0 41.0 43 35.48585827330013 38.0 34.0 40.0 27.0 41.0 44 35.37127850569711 38.0 34.0 40.0 27.0 41.0 45 35.24127576592693 38.0 34.0 40.0 26.0 41.0 46 35.18884268884269 38.0 34.0 40.0 26.0 41.0 47 35.13762897065223 38.0 34.0 40.0 26.0 41.0 48 35.082638237521955 38.0 34.0 40.0 26.0 41.0 49 35.009551805830874 38.0 34.0 40.0 26.0 41.0 50 34.89717997066834 37.0 34.0 40.0 26.0 41.0 51 34.325049235281796 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 0.0 12 8.0 13 9.0 14 18.0 15 98.0 16 214.0 17 608.0 18 1260.0 19 2423.0 20 4223.0 21 6699.0 22 10061.0 23 15124.0 24 22031.0 25 30560.0 26 40578.0 27 48521.0 28 55948.0 29 66198.0 30 79060.0 31 95264.0 32 116786.0 33 147443.0 34 217492.0 35 287659.0 36 244790.0 37 315232.0 38 468230.0 39 825492.0 40 416.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.872616802849365 24.890779867524053 30.238037679898145 12.998565649728441 2 29.549098293284338 26.855324018114718 29.751518960821286 13.844058727779657 3 29.24392012764106 25.554738996599465 30.897097455236988 14.304243420522491 4 25.382488033650823 28.456800270753757 31.092233557349836 15.068478138245581 5 23.02177311479637 33.31438057019452 29.211590839497813 14.452255475511288 6 22.243194894357686 41.42194072426631 26.363938177891665 9.970926203484343 7 90.80771648213508 3.090525230060114 4.996857322438718 1.1049009653660817 8 91.09468323421812 2.3719640928943257 4.828377572563619 1.7049751003239375 9 84.5780592757337 6.7038308433657265 6.372060790665442 2.346049090235137 10 30.369256555303064 47.87213331399378 11.57913906751116 10.179471063191993 11 33.58955019420136 24.409096037003014 25.972151041918483 16.029202726877145 12 32.0740060274944 22.64381376009283 26.524198617221874 18.7579815951909 13 25.494399587422844 27.7805282921562 28.218601427903756 18.506470692517205 14 20.215603796999147 30.67066350787281 29.245467291978922 19.868265403149124 15 19.052974262276585 27.015036503408595 35.189285886960306 18.74270334735451 16 23.549066060693967 25.588164192815356 32.6121613563474 18.250608390143274 17 23.04849393221486 25.09110541668681 28.220922174410546 23.639478476687778 18 22.94928201904946 25.7017840738771 30.995020064787504 20.353913842285934 19 25.049525375106768 26.678141468839144 27.61162951860626 20.660703637447824 20 26.342439040113458 27.61881738625925 27.22577317926155 18.812970394365745 21 24.761785040854807 26.64336250382762 30.03010523940757 18.564747215910007 22 24.392109461876903 24.014891456751922 29.483698367419297 22.10930071395188 23 20.910377282470304 27.58784186691163 29.51947654273236 21.982304307885702 24 20.50489129558897 27.00839658979194 32.342503505294204 20.144208609324888 25 21.079114893068382 28.06842978936002 30.19462038066689 20.657834936904703 26 21.05300649486696 30.01334429241406 27.63084014246805 21.30280907025093 27 20.280391303647118 29.821560379699914 29.065383809569855 20.832664507083113 28 18.616448290866895 28.89851568921336 31.861303163628747 20.623732856290996 29 20.177891666263758 26.524617640896707 31.083853083853086 22.213637608986446 30 21.406469080887685 28.020113136392204 29.731921545875036 20.841496236845074 31 24.09186288256056 27.519960031587935 28.22794887911167 20.160228206739834 32 24.598655900981484 26.42927363857596 29.007397379490403 19.96467308095215 33 24.246643781527503 26.524649873487082 28.47349675256652 20.755209592418893 34 20.754178149526986 27.667972086576736 29.479475898080548 22.098373865815727 35 20.758819642540573 27.292720269464454 30.07964673080952 21.868813357185452 36 23.97856532740254 27.04182178600783 28.115650534255188 20.863962352334443 37 21.092523650663185 30.08702799400474 28.500249802575382 20.320198552756693 38 20.978807071830328 29.2807619784364 27.87806411062225 21.862366839111026 39 20.698544698544698 28.541314122709473 29.187029605634258 21.57311157311157 40 22.993472900449643 26.92755725313865 28.577188995793644 21.50178085061806 41 18.84462279811117 26.81190671888346 29.29919902012925 25.044271462876118 42 21.035762059017873 26.80810327321955 28.22269496688101 23.93343970088156 43 21.116569163080793 26.921110735064225 28.930232558139537 23.032087543715452 44 20.97761446598656 27.573852922690133 29.454624570903643 21.99390804041967 45 20.421376653934793 28.93410046898419 27.54020209834163 23.104320778739385 46 21.74201034666151 28.171767474093055 28.270785991716224 21.81543618752921 47 20.677496817031702 27.583683862753634 29.552643878225272 22.186175441989395 48 21.035439733114153 27.491949910554563 29.77566117101001 21.69694918532128 49 21.562668213831003 26.481909458653647 29.852922690131994 22.102499637383357 50 20.488452674499186 28.47942754919499 29.190542957984817 21.841576818321006 51 19.75354961401473 28.164676304211188 28.83405050846911 23.247723573304967 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1383.0 1 2784.5 2 4186.0 3 13017.0 4 21848.0 5 15600.5 6 9353.0 7 9784.5 8 10216.0 9 10951.5 10 11687.0 11 12237.5 12 12788.0 13 12751.0 14 12714.0 15 12642.5 16 12571.0 17 11944.0 18 11317.0 19 12254.5 20 13192.0 21 13810.0 22 14428.0 23 16580.5 24 18733.0 25 21572.0 26 29971.0 27 35531.0 28 43696.5 29 51862.0 30 57766.0 31 63670.0 32 74909.5 33 86149.0 34 97888.0 35 109627.0 36 116445.0 37 123263.0 38 137273.0 39 151283.0 40 167672.0 41 184061.0 42 203018.5 43 221976.0 44 230057.5 45 238139.0 46 243745.0 47 249351.0 48 253196.5 49 257042.0 50 244344.5 51 231647.0 52 218414.5 53 205182.0 54 186695.5 55 168209.0 56 156107.5 57 144006.0 58 133255.5 59 122505.0 60 105913.0 61 89321.0 62 78349.0 63 67377.0 64 57036.5 65 46696.0 66 38211.5 67 29727.0 68 24385.5 69 19044.0 70 14902.5 71 10761.0 72 8856.5 73 6952.0 74 5669.5 75 3916.0 76 3445.0 77 2264.0 78 1083.0 79 961.0 80 839.0 81 598.5 82 358.0 83 218.5 84 79.0 85 47.0 86 15.0 87 19.5 88 24.0 89 17.5 90 11.0 91 6.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3102450.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.84615276016043 #Duplication Level Percentage of deduplicated Percentage of total 1 79.00503574620228 13.30930901002459 2 8.399230320912404 2.8298943410772335 3 2.8263674786279385 1.4284025490394716 4 1.3140858461352232 0.8854916361583458 5 0.7655731590757455 0.6448481193434304 6 0.5300938848690377 0.5358025537038423 7 0.37218082554969273 0.438887052912892 8 0.295256164458334 0.39791443598753173 9 0.2262382045742607 0.34301190189981795 >10 2.854108275847823 11.981189804257744 >50 1.6294305351055514 20.139039640326807 >100 1.7760131140552107 45.727859014928505 >500 0.0048382155958418644 0.5564205118457491 >1k 0.001354700366835722 0.35308104196926604 >5k 0.0 0.0 >10k+ 1.9352862383367457E-4 0.4288483865248131 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13154 0.4239874937549356 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3250 0.10475591870940709 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.446518074425051E-5 0.0 0.0 0.03983948169994682 0.0 2 6.446518074425051E-5 0.0 0.0 0.14565907589163404 0.0 3 6.446518074425051E-5 0.0 0.0 0.22504794597817854 0.0 4 6.446518074425051E-5 0.0 0.0 0.4181211623072088 0.0 5 6.446518074425051E-5 0.0 0.0 0.6929362278199488 0.0 6 6.446518074425051E-5 0.0 0.0 1.0442069976953698 0.0 7 6.446518074425051E-5 0.0 0.0 1.207174974616835 0.0 8 6.446518074425051E-5 0.0 0.0 1.627906976744186 0.0 9 6.446518074425051E-5 0.0 0.0 1.7703750261889797 0.0 10 6.446518074425051E-5 0.0 0.0 2.0510886557398185 0.0 11 6.446518074425051E-5 0.0 0.0 2.3976857000112815 0.0 12 6.446518074425051E-5 0.0 0.0 2.690937807216877 0.0 13 6.446518074425051E-5 0.0 0.0 2.815420071234025 0.0 14 6.446518074425051E-5 0.0 0.0 2.871794871794872 0.0 15 6.446518074425051E-5 0.0 0.0 2.9565343518831892 0.0 16 6.446518074425051E-5 0.0 0.0 3.1220487034440523 0.0 17 6.446518074425051E-5 0.0 0.0 3.3119631259166145 0.0 18 6.446518074425051E-5 0.0 0.0 3.5407500523779594 0.0 19 6.446518074425051E-5 0.0 0.0 3.6698093442279487 0.0 20 9.669777111637576E-5 0.0 0.0 3.8133088365646506 0.0 21 9.669777111637576E-5 0.0 0.0 3.995068413673065 0.0 22 9.669777111637576E-5 0.0 0.0 4.205708391754904 0.0 23 9.669777111637576E-5 0.0 0.0 4.411642411642411 0.0 24 9.669777111637576E-5 0.0 0.0 4.577285693564764 0.0 25 9.669777111637576E-5 0.0 0.0 4.721977791745234 0.0 26 1.2893036148850103E-4 0.0 0.0 4.8645103063707715 0.0 27 1.2893036148850103E-4 0.0 0.0 5.018904414253251 0.0 28 1.2893036148850103E-4 0.0 0.0 5.176392850811456 0.0 29 1.2893036148850103E-4 0.0 0.0 5.352511724604748 0.0 30 1.2893036148850103E-4 0.0 0.0 5.5664716594949155 0.0 31 1.2893036148850103E-4 0.0 0.0 5.753420683653242 0.0 32 1.2893036148850103E-4 0.0 0.0 5.920256571419362 0.0 33 1.2893036148850103E-4 0.0 0.0 6.10191945075666 0.0 34 1.2893036148850103E-4 0.0 0.0 6.298280391303647 0.0 35 1.2893036148850103E-4 0.0 0.0 6.510789859627069 0.0 36 1.2893036148850103E-4 0.0 0.0 6.7016390272204225 0.0 37 1.2893036148850103E-4 0.0 0.0 6.898870247707457 0.0 38 1.2893036148850103E-4 0.0 0.0 7.115924511273349 0.0 39 1.2893036148850103E-4 0.0 0.0 7.436155296620413 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGT 30 2.1666983E-6 45.000004 44 CGGTCTA 880 0.0 42.187504 31 CGACGGT 885 0.0 41.440678 28 TCACGAC 900 0.0 41.0 25 TTACGCG 55 6.184564E-11 40.909092 1 ACGGTCT 910 0.0 40.796703 30 CGTTTTT 8160 0.0 40.61581 1 CACGACG 910 0.0 40.54945 26 AATCGGC 50 1.0822987E-9 40.5 32 CACGACC 480 0.0 40.312504 27 TCTCACG 965 0.0 39.170982 23 GTTTGCG 190 0.0 39.078945 1 TACGGGA 1410 0.0 38.93617 4 ACGGGAT 1770 0.0 38.644066 5 ACGACGG 975 0.0 37.846153 27 AGGGCGA 2600 0.0 37.817307 6 TAAGGGA 5700 0.0 37.776314 4 ACTAACC 1000 0.0 37.575 14 TAACGGG 635 0.0 37.559055 3 TTAGGGA 6120 0.0 37.536762 4 >>END_MODULE