##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547476_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3148655 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226277569311343 31.0 31.0 33.0 30.0 34.0 2 31.620779983834367 31.0 31.0 34.0 30.0 34.0 3 31.681920057929496 31.0 31.0 34.0 30.0 34.0 4 35.494021733089205 37.0 35.0 37.0 33.0 37.0 5 35.38284982000251 37.0 35.0 37.0 33.0 37.0 6 35.431889489321634 37.0 35.0 37.0 33.0 37.0 7 35.894922435135 37.0 35.0 37.0 35.0 37.0 8 35.93330993710013 37.0 35.0 37.0 35.0 37.0 9 37.65031735772894 39.0 37.0 39.0 35.0 39.0 10 36.95593007172904 39.0 37.0 39.0 32.0 39.0 11 36.73678062537814 39.0 35.0 39.0 32.0 39.0 12 36.42622738915505 38.0 35.0 39.0 32.0 39.0 13 36.37437540791227 39.0 35.0 39.0 32.0 39.0 14 37.50917963384366 39.0 36.0 41.0 32.0 41.0 15 37.601563524743106 39.0 36.0 41.0 32.0 41.0 16 37.62890504040614 40.0 36.0 41.0 32.0 41.0 17 37.55334388810461 39.0 36.0 41.0 32.0 41.0 18 37.41987801140487 39.0 36.0 41.0 32.0 41.0 19 37.32743790602654 39.0 36.0 41.0 32.0 41.0 20 37.17551557728618 39.0 35.0 41.0 32.0 41.0 21 37.110793021147124 39.0 35.0 41.0 32.0 41.0 22 37.00675018380864 39.0 35.0 41.0 31.0 41.0 23 36.89330079033746 39.0 35.0 41.0 31.0 41.0 24 36.7910793656339 38.0 35.0 40.0 31.0 41.0 25 36.66629497356808 38.0 35.0 40.0 31.0 41.0 26 36.50897796043073 38.0 35.0 40.0 31.0 41.0 27 36.412223631995246 38.0 35.0 40.0 31.0 41.0 28 36.28226560229685 38.0 35.0 40.0 30.0 41.0 29 36.287250905545385 38.0 35.0 40.0 30.0 41.0 30 36.18390868481939 38.0 35.0 40.0 30.0 41.0 31 36.06648997746657 38.0 35.0 40.0 30.0 41.0 32 35.88988028221574 38.0 35.0 40.0 30.0 41.0 33 35.7426266135858 38.0 35.0 40.0 29.0 41.0 34 35.54323766814719 38.0 35.0 40.0 27.0 41.0 35 35.38261416382551 38.0 34.0 40.0 26.0 41.0 36 35.32914149057296 38.0 34.0 40.0 26.0 41.0 37 35.27141874864029 38.0 34.0 40.0 26.0 41.0 38 35.168661222013846 38.0 34.0 40.0 25.0 41.0 39 35.066598912869146 38.0 34.0 40.0 25.0 41.0 40 34.96408625270155 38.0 34.0 40.0 24.0 41.0 41 34.84870111206214 38.0 34.0 40.0 24.0 41.0 42 34.77575250384688 38.0 34.0 40.0 24.0 41.0 43 34.719309991091436 38.0 34.0 40.0 24.0 41.0 44 34.57798393282211 37.0 33.0 40.0 23.0 41.0 45 34.44915241587281 37.0 33.0 40.0 23.0 41.0 46 34.393145962323594 37.0 33.0 40.0 23.0 41.0 47 34.322091496210284 37.0 33.0 40.0 23.0 41.0 48 34.23801178598481 37.0 33.0 40.0 23.0 41.0 49 34.15354683190124 37.0 33.0 40.0 23.0 41.0 50 34.02869796786247 36.0 33.0 40.0 23.0 41.0 51 33.518195229391594 36.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 2.0 12 6.0 13 7.0 14 25.0 15 79.0 16 229.0 17 566.0 18 1230.0 19 2458.0 20 4372.0 21 7212.0 22 11446.0 23 17614.0 24 26761.0 25 39350.0 26 50546.0 27 57302.0 28 62687.0 29 70623.0 30 83751.0 31 100246.0 32 122003.0 33 153774.0 34 221307.0 35 309064.0 36 302514.0 37 329184.0 38 440122.0 39 733778.0 40 394.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.551249660569354 25.002548707305184 28.03965502730531 15.406546604820154 2 32.437374053365644 26.457328605388653 27.802125034340058 13.303172306905648 3 27.110210550219062 25.762841594268025 33.67113894662959 13.455808908883316 4 24.440054562980066 28.448559781875115 32.83808483304776 14.273300822097054 5 22.00463372455858 32.16027160803581 31.704934329102425 14.13016033830318 6 20.6868964684921 40.848235198838864 28.142746664845784 10.322121667823245 7 85.39458911821079 3.0083956483006236 9.42170545836238 2.175309775126205 8 84.66481719972496 2.8671924996546148 9.142887995032801 3.325102305587624 9 78.71615022922485 6.153865698210823 11.74463381983736 3.3853502527269583 10 31.656500950405807 38.638593304125095 17.201567018298288 12.503338727170807 11 29.38540424403436 25.774624403118157 27.566373578559734 17.27359777428775 12 26.260069775824917 24.714616240902863 29.420847949362503 19.604466033909716 13 22.347986680026867 28.653059798548902 31.451111665139557 17.54784185628467 14 17.964210115112643 32.271271384130685 30.75973709409256 19.004781406664115 15 17.01269272117777 29.673146152881152 35.73440087910552 17.579760246835555 16 19.60163943016939 28.498803457349247 34.3627675944173 17.53678951806406 17 18.03182628773238 30.449382355323145 29.767567421645115 21.751223935299357 18 19.50455035562804 29.93189155369515 31.583104531935064 18.980453558741747 19 21.57232215025146 32.4351191222919 27.321634158077018 18.670924569379626 20 23.05162045381282 30.965856849988327 27.452166083613477 18.530356612585376 21 21.558887842586756 32.16446387425742 28.55352523537828 17.72312304777754 22 21.01802198081403 29.313087651711605 28.35077199629683 21.318118371177537 23 18.69229877519131 32.81553552231032 27.640754544400703 20.85141115809766 24 18.19386372911608 30.78416022079269 32.34876479004527 18.673211260045957 25 18.402079618122656 32.20597366176987 29.71519585346759 19.676750866639882 26 18.076512034503622 34.288545426539265 28.719627904613237 18.915314634343872 27 18.485893182962247 33.03858314105547 28.783020051418777 19.692503624563503 28 17.601388529387947 33.028610628982854 31.00714432035266 18.362856521276544 29 18.223336631037697 30.30567019886269 30.705872825063402 20.765120345036216 30 19.31913785409961 31.42471944369898 30.418924906031304 18.837217796170112 31 20.98769156989254 31.315085330085385 28.16104019017644 19.536182909845632 32 21.34727367717327 30.764469273388162 29.342179438522166 18.546077610916406 33 20.933604983715266 30.228017994985162 29.08848381292965 19.749893208369922 34 19.142427480940274 30.586964910414128 28.976912364168193 21.293695244477405 35 18.011944782772325 30.330029806377645 30.024439006496422 21.633586404353604 36 19.856002007206254 30.620439521001824 28.258383341458497 21.26517513033343 37 18.468298368668528 32.26530058072415 28.84193409566942 20.424466954937902 38 18.033827142065423 32.35067036560055 28.019964079900785 21.595538412433246 39 18.403413521011352 31.65199108825832 28.44481214994974 21.499783240780587 40 20.12665725524073 30.525510098756452 27.989252553868237 21.358580092134577 41 17.454659211631633 30.264096892165064 29.294444770862476 22.98679912534082 42 19.739126706482608 30.68484797477018 28.12502481218171 21.451000506565503 43 19.431312735120233 30.51982513168321 29.505137908090916 20.54372422510564 44 19.359663094241828 32.04977998542235 27.953872367725268 20.63668455261056 45 18.54560121702759 32.6058586920447 27.1846867948378 21.66385329608992 46 20.727485227819496 31.409474839256763 26.8281853680381 21.03485456488564 47 19.01770756084741 30.562859379639878 28.76291622931061 21.6565168302021 48 18.84591992453921 29.849157815003547 29.951582501099676 21.353339759357567 49 20.1760116621224 28.952393958690298 29.34687985822518 21.524714520962124 50 18.19853238922651 30.85384076693064 29.870881376333703 21.07674546750914 51 17.257019266956846 30.31958090041621 29.14739785718029 23.276001975446658 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2457.0 1 3211.0 2 3965.0 3 34246.0 4 64527.0 5 40632.5 6 16738.0 7 18827.5 8 20917.0 9 26483.5 10 32050.0 11 37860.5 12 43671.0 13 45567.0 14 47463.0 15 45234.0 16 43005.0 17 39595.5 18 36186.0 19 33038.5 20 29891.0 21 28721.0 22 27551.0 23 28836.5 24 30122.0 25 29715.0 26 31579.0 27 33850.0 28 40266.0 29 46682.0 30 52481.0 31 58280.0 32 67353.5 33 76427.0 34 86363.5 35 96300.0 36 104189.5 37 112079.0 38 119826.5 39 127574.0 40 147295.0 41 167016.0 42 183125.0 43 199234.0 44 215357.0 45 231480.0 46 257951.0 47 284422.0 48 296112.0 49 307802.0 50 284890.5 51 261979.0 52 226534.5 53 191090.0 54 168432.0 55 145774.0 56 125336.5 57 104899.0 58 94866.5 59 84834.0 60 74835.0 61 64836.0 62 56849.5 63 48863.0 64 39876.0 65 30889.0 66 24506.0 67 18123.0 68 14434.5 69 10746.0 70 8812.5 71 6879.0 72 5504.5 73 4130.0 74 3629.5 75 2611.0 76 2093.0 77 1421.0 78 749.0 79 544.5 80 340.0 81 276.0 82 212.0 83 127.5 84 43.0 85 31.5 86 20.0 87 14.5 88 9.0 89 11.0 90 13.0 91 9.0 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3148655.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.102048636327762 #Duplication Level Percentage of deduplicated Percentage of total 1 74.66804921346638 16.50316855295749 2 9.659102480999028 4.269719056366294 3 3.858875169141937 2.5586714000967783 4 2.153280385889727 1.9036763126634142 5 1.4390299221514173 1.590275466426079 6 1.0361492372369652 1.374061250154319 7 0.7353433644234322 1.1376816363421312 8 0.5496121134070492 0.9718042929309993 9 0.4363201871233498 0.8679212997130719 >10 3.5018693260895386 17.163253632281616 >50 1.03984432609536 16.58324293891545 >100 0.9164027106642759 31.357603172844676 >500 0.002915030148367563 0.46285174422233827 >1k 0.003060781655785941 1.5708546494650528 >5k 0.0 0.0 >10k+ 1.4575150741837816E-4 1.6852145946202102 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 52313 1.6614395670532338 No Hit CTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGCT 4409 0.14002804372025515 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTT 4223 0.13412075949889715 No Hit CCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 3502 0.11122209324298789 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG 3385 0.10750622091019817 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.351918517589256E-5 0.0 0.0 0.15047694968168948 0.0 2 6.351918517589256E-5 0.0 0.0 0.42144979364204715 0.0 3 9.527877776383885E-5 0.0 0.0 0.6894689954917258 0.0 4 9.527877776383885E-5 0.0 0.0 1.0986595863948256 0.0 5 9.527877776383885E-5 0.0 0.0 1.8330366458059075 0.0 6 9.527877776383885E-5 0.0 0.0 3.1738631256838237 0.0 7 9.527877776383885E-5 0.0 0.0 3.976459789973814 0.0 8 9.527877776383885E-5 0.0 0.0 5.614746614030436 0.0 9 9.527877776383885E-5 0.0 0.0 6.400637732619166 0.0 10 9.527877776383885E-5 0.0 0.0 7.341388624666723 0.0 11 9.527877776383885E-5 0.0 0.0 8.280932652195938 0.0 12 9.527877776383885E-5 0.0 0.0 8.99149001716606 0.0 13 9.527877776383885E-5 0.0 0.0 9.36990556285144 0.0 14 9.527877776383885E-5 0.0 0.0 9.561924059638162 0.0 15 9.527877776383885E-5 0.0 0.0 9.757817226720615 0.0 16 9.527877776383885E-5 0.0 0.0 10.080081812710507 0.0 17 9.527877776383885E-5 0.0 0.0 10.465420949580059 0.0 18 1.2703837035178513E-4 0.0 0.0 10.885187484814944 0.0 19 1.2703837035178513E-4 0.0 0.0 11.142535463555074 0.0 20 1.2703837035178513E-4 0.0 0.0 11.401566700702363 0.0 21 1.2703837035178513E-4 0.0 0.0 11.722465624210972 0.0 22 1.2703837035178513E-4 0.0 0.0 12.071312989196974 0.0 23 1.2703837035178513E-4 0.0 0.0 12.428386088663254 0.0 24 1.2703837035178513E-4 0.0 0.0 12.702090257586176 0.0 25 1.2703837035178513E-4 0.0 0.0 12.944955862106202 0.0 26 1.2703837035178513E-4 0.0 0.0 13.16565327099984 0.0 27 1.2703837035178513E-4 0.0 0.0 13.381110347116467 0.0 28 1.2703837035178513E-4 0.0 0.0 13.616988841267144 0.0 29 1.2703837035178513E-4 0.0 0.0 13.858075908602244 0.0 30 1.2703837035178513E-4 0.0 0.0 14.163380872150173 0.0 31 1.2703837035178513E-4 0.0 0.0 14.41904559248314 0.0 32 1.2703837035178513E-4 0.0 0.0 14.66769144285417 0.0 33 1.2703837035178513E-4 0.0 0.0 14.922276337039149 0.0 34 1.2703837035178513E-4 0.0 0.0 15.165173701151762 0.0 35 1.2703837035178513E-4 0.0 0.0 15.42236288192895 0.0 36 1.2703837035178513E-4 0.0 0.0 15.669770108189052 0.0 37 1.2703837035178513E-4 0.0 0.0 15.915494076041993 0.0 38 1.2703837035178513E-4 0.0 0.0 16.176970801818555 0.0 39 1.2703837035178513E-4 0.0 0.0 16.441210612150268 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTACG 55 1.8189894E-12 44.999996 1 CGTTTTT 18105 0.0 43.334713 1 GCGATAT 245 0.0 42.2449 9 ATACCGG 50 1.0822987E-9 40.5 2 TAGGGCG 1210 0.0 40.35124 5 AGGGCGA 3050 0.0 40.204918 6 TAATGCG 140 0.0 40.17857 1 ATTCGGC 45 1.9301297E-8 40.0 17 TATACGA 45 1.9301297E-8 40.0 26 CGACGGT 575 0.0 39.913044 28 CGGTCTA 575 0.0 39.913044 31 CGTAAGG 645 0.0 39.76744 2 TATAGCG 125 0.0 39.6 1 GGGCGAT 5715 0.0 39.52756 7 CGGCATA 40 3.460773E-7 39.375004 25 ATTACGT 40 3.460773E-7 39.375004 12 TCGGAAC 40 3.460773E-7 39.375004 40 CGTACCG 40 3.460773E-7 39.375004 45 ACGTACC 40 3.460773E-7 39.375004 16 CGAGGGA 2085 0.0 39.06475 4 >>END_MODULE