##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547472_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3543691 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35557304516675 31.0 31.0 33.0 30.0 34.0 2 31.792709635236257 31.0 31.0 34.0 30.0 34.0 3 31.923726984096525 31.0 31.0 34.0 30.0 34.0 4 35.67673084363168 37.0 35.0 37.0 33.0 37.0 5 35.565202214301415 37.0 35.0 37.0 33.0 37.0 6 35.60623570170198 37.0 35.0 37.0 33.0 37.0 7 35.98148145535262 37.0 35.0 37.0 35.0 37.0 8 36.01797504353512 37.0 35.0 37.0 35.0 37.0 9 37.75727990956322 39.0 38.0 39.0 35.0 39.0 10 37.12117168229397 39.0 37.0 39.0 33.0 39.0 11 36.978606486852264 39.0 37.0 39.0 33.0 39.0 12 36.64347484021604 39.0 35.0 39.0 32.0 39.0 13 36.55853571883102 39.0 35.0 39.0 32.0 39.0 14 37.652155901854876 40.0 36.0 41.0 32.0 41.0 15 37.75737670129816 40.0 36.0 41.0 32.0 41.0 16 37.7800999014869 40.0 36.0 41.0 33.0 41.0 17 37.713268171519466 40.0 36.0 41.0 32.0 41.0 18 37.59287195187165 39.0 36.0 41.0 32.0 41.0 19 37.53780450947896 39.0 36.0 41.0 32.0 41.0 20 37.417936552594455 39.0 35.0 41.0 32.0 41.0 21 37.37846640691866 39.0 35.0 41.0 32.0 41.0 22 37.30799976634532 39.0 35.0 41.0 32.0 41.0 23 37.22499027144297 39.0 35.0 41.0 32.0 41.0 24 37.15501012926917 39.0 35.0 41.0 32.0 41.0 25 37.05451745087255 39.0 35.0 41.0 31.0 41.0 26 36.93366295198989 39.0 35.0 41.0 31.0 41.0 27 36.826998177888534 39.0 35.0 41.0 31.0 41.0 28 36.71284262651569 38.0 35.0 40.0 31.0 41.0 29 36.76792417849073 39.0 35.0 40.0 31.0 41.0 30 36.712018909097885 39.0 35.0 41.0 31.0 41.0 31 36.62809991051703 39.0 35.0 41.0 30.0 41.0 32 36.57866303805834 39.0 35.0 41.0 30.0 41.0 33 36.50483097990203 39.0 35.0 41.0 30.0 41.0 34 36.35029549698323 39.0 35.0 41.0 30.0 41.0 35 36.23906824833204 39.0 35.0 41.0 30.0 41.0 36 36.19432309419755 39.0 35.0 41.0 29.0 41.0 37 36.16297103782468 39.0 35.0 41.0 29.0 41.0 38 36.05543654906706 39.0 35.0 41.0 29.0 41.0 39 35.972877432033435 39.0 35.0 41.0 29.0 41.0 40 35.88738521502016 39.0 35.0 41.0 28.0 41.0 41 35.788957050713506 38.0 35.0 41.0 27.0 41.0 42 35.74322337923933 38.0 35.0 41.0 27.0 41.0 43 35.728160553501986 38.0 35.0 41.0 27.0 41.0 44 35.602759664993364 38.0 35.0 40.0 27.0 41.0 45 35.48715139102139 38.0 34.0 40.0 27.0 41.0 46 35.442968080456225 38.0 34.0 40.0 27.0 41.0 47 35.388429747401794 38.0 34.0 40.0 27.0 41.0 48 35.3203134810569 38.0 34.0 40.0 26.0 41.0 49 35.24149114581378 38.0 34.0 40.0 26.0 41.0 50 35.163101410365634 38.0 34.0 40.0 26.0 41.0 51 34.60399792194071 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 0.0 13 5.0 14 13.0 15 55.0 16 144.0 17 445.0 18 1051.0 19 2057.0 20 3759.0 21 5937.0 22 9433.0 23 14363.0 24 22064.0 25 32917.0 26 44243.0 27 53030.0 28 59686.0 29 68005.0 30 81398.0 31 99191.0 32 123955.0 33 156550.0 34 227728.0 35 293087.0 36 290354.0 37 375413.0 38 568183.0 39 1010120.0 40 502.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.395285593467374 24.606123953809742 30.02451398838104 14.97407646434184 2 30.45564638677582 25.929574559407126 29.994629892956244 13.620149160860809 3 27.45301438528359 26.22435195393729 32.47946844123825 13.843165219540868 4 24.923730652587935 28.572496868378195 31.59471297017714 14.909059508856725 5 22.756019077284108 32.93822740188126 30.04339260957008 14.262360911264555 6 22.20845440530791 40.77550779681411 26.449174039158606 10.56686375871937 7 90.34176512568392 2.5055231960122932 5.925290890204591 1.227420788099188 8 90.74834685078355 2.147280900055902 5.719911809466457 1.384460439694093 9 83.93110460251755 6.527911152524303 7.325187212993457 2.2157970319646942 10 26.54336961095084 50.59560779989 12.551432955074244 10.309589634084913 11 31.524531907550628 22.92025461587932 28.500227587563366 17.054985889006687 12 30.622647403512325 21.285800596045195 28.394716130723584 19.69683586971889 13 26.136138845062955 24.188931822780262 30.012125775074633 19.66280355708215 14 21.271352383715172 27.102080852986337 30.542251003261857 21.084315760036638 15 19.96237820961252 26.270208096586302 34.12298081294335 19.64443288085784 16 24.264051239230508 25.855019526251017 31.513836844126647 18.367092390391825 17 24.157636769120106 25.154732734880103 29.178446992133345 21.50918350386645 18 23.08505453776867 25.359349898171146 31.38978539607432 20.165810167985864 19 24.503434413440676 26.34213874742465 28.76610855743348 20.3883182817012 20 25.13627740116167 26.644873946402214 29.187420686510197 19.031427965925925 21 25.408169053114392 25.058815794040733 31.237655879138448 18.295359273706428 22 24.80394029840638 23.324465931143546 30.550152369379834 21.32144140107024 23 21.88407510700002 26.11610323812093 30.73137584512871 21.268445809750343 24 21.091285893719288 26.267922344245026 31.78457151032638 20.856220251709306 25 21.81677239917363 27.77522080790904 29.553197499443378 20.854809293473952 26 21.726132442134485 28.48081280224489 28.31807287937916 21.47498187624147 27 20.47994590950509 27.905282938043978 30.6476495834428 20.967121569008132 28 19.31759851522043 27.42894343778845 32.266893473499806 20.98656457349131 29 21.170412431557946 25.119486998160955 31.748366322007193 21.961734248273903 30 21.717074090263512 26.203667306207002 31.196032611195502 20.88322599233398 31 22.68507609721051 26.35119709929562 29.96573346829619 20.99799333519768 32 23.12247315017026 26.208492783371913 30.11938682012625 20.549647246331578 33 23.355591669815457 26.097393931920138 29.50214903048827 21.04486536777614 34 21.1359568314506 26.684804064462732 30.5400499084147 21.63918919567197 35 21.434769566533877 26.71209199673448 30.297844817733825 21.55529361899782 36 23.22967775689246 26.45786554188839 29.249361753042237 21.063094948176914 37 21.654907270413815 28.345784099121506 29.361674028576417 20.63763460188826 38 21.411037249015223 27.998885907377364 28.981420784148504 21.60865605945891 39 21.137113817203588 27.7180769993772 29.069069509728696 22.07573967369051 40 22.21968563286133 27.093869076056578 29.075051972646598 21.611393318435496 41 20.884439416416388 26.186368958241562 29.699739621767247 23.229452003574806 42 21.076132202271587 26.78131360776095 29.451298095686106 22.69125609428136 43 21.226540350160327 26.72521390832327 29.94575429968358 22.10249144183282 44 21.645199877754578 27.36528100220928 29.171194666803622 21.818324453232517 45 21.01294949249243 27.73548822400147 28.53098647709408 22.720575806412015 46 21.676579588908854 27.703600567882468 29.007495292337847 21.612324550870827 47 20.981202932196965 27.026989655700795 29.978742503226158 22.013064908876085 48 21.14501518332157 27.122652624057796 30.23770977774304 21.494622414877597 49 21.335127695953172 26.66733640150905 29.93556718122432 22.061968721313455 50 20.665486917454146 26.99995569591141 30.308314127840152 22.02624325879429 51 19.974597107930688 27.554321186582015 29.57345885970306 22.89762284578424 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1895.0 1 3291.0 2 4687.0 3 23607.5 4 42528.0 5 28581.0 6 14634.0 7 14690.0 8 14746.0 9 15529.0 10 16312.0 11 16427.5 12 16543.0 13 16363.5 14 16184.0 15 15553.0 16 14922.0 17 14395.5 18 13869.0 19 13939.0 20 14009.0 21 14258.5 22 14508.0 23 16990.5 24 19473.0 25 25101.5 26 36813.0 27 42896.0 28 48980.0 29 55064.0 30 64617.0 31 74170.0 32 87157.0 33 100144.0 34 113303.5 35 126463.0 36 134307.0 37 142151.0 38 153113.0 39 164075.0 40 179330.0 41 194585.0 42 214745.0 43 234905.0 44 243924.0 45 252943.0 46 261139.5 47 269336.0 48 276055.0 49 282774.0 50 273043.0 51 263312.0 52 242964.0 53 222616.0 54 210662.5 55 198709.0 56 186023.0 57 173337.0 58 158151.5 59 142966.0 60 127339.0 61 111712.0 62 99173.5 63 86635.0 64 74562.0 65 62489.0 66 52011.0 67 41533.0 68 34216.0 69 26899.0 70 21913.0 71 16927.0 72 13644.0 73 10361.0 74 7979.0 75 4406.5 76 3216.0 77 2408.0 78 1600.0 79 1132.0 80 664.0 81 520.0 82 376.0 83 246.5 84 117.0 85 85.0 86 53.0 87 35.5 88 18.0 89 11.5 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3543691.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.618235110425193 #Duplication Level Percentage of deduplicated Percentage of total 1 76.83843133447655 13.5375754876707 2 7.76231011492056 2.73516409209404 3 2.6880665161437998 1.4207696362164903 4 1.4569992441426105 1.0267902095606523 5 0.9161791041822748 0.8070729430371025 6 0.6680359802240134 0.7061768977086014 7 0.5387953197058368 0.6644835833281898 8 0.4032146495533852 0.5683144396639392 9 0.36109158980060746 0.5725616872953883 >10 4.916972625788258 21.90456525464022 >50 2.383435621487714 30.341067352070755 >100 1.0622666037427204 24.282328613351723 >500 0.0033933543257369256 0.4247860507740912 >1k 6.463532049022716E-4 0.216763017934048 >5k 0.0 0.0 >10k+ 1.615883012255679E-4 0.7915807346540852 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27805 0.7846338746803827 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.6438329414161676E-5 0.0 0.0 0.029799437930677363 0.0 2 5.6438329414161676E-5 0.0 0.0 0.09653776246292355 0.0 3 5.6438329414161676E-5 0.0 0.0 0.15495143340658088 0.0 4 5.6438329414161676E-5 0.0 0.0 0.25617357721087985 0.0 5 5.6438329414161676E-5 0.0 0.0 0.4327973291124988 0.0 6 5.6438329414161676E-5 0.0 0.0 0.7048582960534652 0.0 7 5.6438329414161676E-5 0.0 0.0 0.8498483643184465 0.0 8 5.6438329414161676E-5 0.0 0.0 1.2634566614301304 0.0 9 5.6438329414161676E-5 0.0 0.0 1.4423943848377299 0.0 10 5.6438329414161676E-5 0.0 0.0 1.7699906679222315 0.0 11 5.6438329414161676E-5 0.0 0.0 2.082235725406081 0.0 12 5.6438329414161676E-5 0.0 0.0 2.3702687395712547 0.0 13 5.6438329414161676E-5 0.0 0.0 2.5070470309064756 0.0 14 5.6438329414161676E-5 0.0 0.0 2.5789776817448247 0.0 15 5.6438329414161676E-5 0.0 0.0 2.6570318913246105 0.0 16 5.6438329414161676E-5 0.0 0.0 2.7952775792245994 0.0 17 5.6438329414161676E-5 0.0 0.0 2.962955855914074 0.0 18 5.6438329414161676E-5 0.0 0.0 3.150951931192646 0.0 19 5.6438329414161676E-5 0.0 0.0 3.2679768072329107 0.0 20 5.6438329414161676E-5 0.0 0.0 3.4124589305331643 0.0 21 5.6438329414161676E-5 0.0 0.0 3.5860067934817117 0.0 22 5.6438329414161676E-5 0.0 0.0 3.7801828658311347 0.0 23 5.6438329414161676E-5 0.0 0.0 3.974612910662922 0.0 24 5.6438329414161676E-5 0.0 0.0 4.124823524398713 0.0 25 5.6438329414161676E-5 0.0 0.0 4.2624483906751465 0.0 26 5.6438329414161676E-5 0.0 0.0 4.3975053129632355 0.0 27 5.6438329414161676E-5 0.0 0.0 4.546869351757814 0.0 28 5.6438329414161676E-5 0.0 0.0 4.693101063269907 0.0 29 5.6438329414161676E-5 0.0 0.0 4.856038520288592 0.0 30 5.6438329414161676E-5 0.0 0.0 5.062941435920909 0.0 31 5.6438329414161676E-5 0.0 0.0 5.232228204998687 0.0 32 5.6438329414161676E-5 0.0 0.0 5.396971688558624 0.0 33 5.6438329414161676E-5 0.0 0.0 5.567048594248201 0.0 34 5.6438329414161676E-5 0.0 0.0 5.750247411526569 0.0 35 5.6438329414161676E-5 0.0 0.0 5.949756906005631 0.0 36 5.6438329414161676E-5 0.0 0.0 6.137273255484183 0.0 37 5.6438329414161676E-5 0.0 0.0 6.331392889504192 0.0 38 5.6438329414161676E-5 0.0 0.0 6.541315255760167 0.0 39 5.6438329414161676E-5 0.0 0.0 6.874357837633134 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAG 195 0.0 42.692307 1 CGTTTTT 13760 0.0 41.79506 1 CGACGGT 825 0.0 40.36364 28 CACGACG 830 0.0 39.8494 26 TCACGAC 845 0.0 39.408283 25 TCGTTAG 120 0.0 39.374996 1 TAAGGGA 7665 0.0 38.835617 4 TACGGGA 2180 0.0 38.600914 4 CGTAAGG 505 0.0 38.316833 2 CGGTCTA 870 0.0 38.27586 31 AAGGGAT 8480 0.0 38.021816 5 AGGGATC 6565 0.0 37.734196 6 TAGGGAC 5430 0.0 37.582874 5 ATTAGCG 270 0.0 37.5 1 CGAACGC 30 1.1404021E-4 37.499996 24 ACGTTAC 30 1.1404021E-4 37.499996 36 TATGGGA 6045 0.0 37.220844 4 ATAGGGA 8350 0.0 36.91617 4 TAGGGCG 1075 0.0 36.837208 5 AGGGATG 10245 0.0 36.8082 6 >>END_MODULE