##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547466_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4565511 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.272166686270168 31.0 31.0 33.0 30.0 34.0 2 31.692706687159443 31.0 31.0 34.0 30.0 34.0 3 31.828625317078416 31.0 31.0 34.0 30.0 34.0 4 35.57832606251524 37.0 35.0 37.0 33.0 37.0 5 35.45605409777788 37.0 35.0 37.0 33.0 37.0 6 35.50483615087117 37.0 35.0 37.0 33.0 37.0 7 35.93327997676492 37.0 35.0 37.0 35.0 37.0 8 35.966899871668254 37.0 35.0 37.0 35.0 37.0 9 37.69658839941466 39.0 37.0 39.0 35.0 39.0 10 36.99299114600753 39.0 37.0 39.0 33.0 39.0 11 36.84691045536852 39.0 37.0 39.0 32.0 39.0 12 36.53427119111092 39.0 35.0 39.0 32.0 39.0 13 36.47246058546349 39.0 35.0 39.0 32.0 39.0 14 37.56993138336541 40.0 36.0 41.0 32.0 41.0 15 37.64425734600135 40.0 36.0 41.0 32.0 41.0 16 37.65297159507446 40.0 36.0 41.0 32.0 41.0 17 37.58817906692153 40.0 36.0 41.0 32.0 41.0 18 37.47441765007247 39.0 36.0 41.0 32.0 41.0 19 37.423460594005796 39.0 36.0 41.0 32.0 41.0 20 37.32862498852812 39.0 35.0 41.0 32.0 41.0 21 37.27651121637863 39.0 35.0 41.0 32.0 41.0 22 37.19403019727693 39.0 35.0 41.0 31.0 41.0 23 37.095838998088055 39.0 35.0 41.0 31.0 41.0 24 37.0315695220097 39.0 35.0 41.0 31.0 41.0 25 36.929931392126754 39.0 35.0 41.0 31.0 41.0 26 36.796850779682714 39.0 35.0 41.0 31.0 41.0 27 36.707709827005125 39.0 35.0 40.0 30.0 41.0 28 36.6000594457006 38.0 35.0 40.0 30.0 41.0 29 36.654132691827925 39.0 35.0 40.0 30.0 41.0 30 36.59945097054853 39.0 35.0 40.0 30.0 41.0 31 36.513004130315316 39.0 35.0 40.0 30.0 41.0 32 36.48578308101766 39.0 35.0 41.0 30.0 41.0 33 36.38694770421098 39.0 35.0 41.0 30.0 41.0 34 36.25820526990297 39.0 35.0 41.0 30.0 41.0 35 36.14419371676029 39.0 35.0 41.0 29.0 41.0 36 36.11087762136593 39.0 35.0 41.0 29.0 41.0 37 36.06916947522413 39.0 35.0 41.0 29.0 41.0 38 35.959694763631056 39.0 35.0 41.0 28.0 41.0 39 35.87728142589077 39.0 35.0 41.0 28.0 41.0 40 35.79228086406976 38.0 35.0 41.0 27.0 41.0 41 35.696368489748465 38.0 35.0 41.0 27.0 41.0 42 35.65150297524198 38.0 35.0 40.0 27.0 41.0 43 35.62931772587997 38.0 35.0 40.0 27.0 41.0 44 35.50288434306697 38.0 34.0 40.0 27.0 41.0 45 35.37206415667381 38.0 34.0 40.0 26.0 41.0 46 35.34152431129834 38.0 34.0 40.0 26.0 41.0 47 35.28462399937269 38.0 34.0 40.0 26.0 41.0 48 35.20696719381467 38.0 34.0 40.0 26.0 41.0 49 35.12355856770469 38.0 34.0 40.0 26.0 41.0 50 35.02770883697356 38.0 34.0 40.0 26.0 41.0 51 34.4375867235891 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 1.0 12 3.0 13 19.0 14 34.0 15 103.0 16 267.0 17 693.0 18 1526.0 19 3053.0 20 5179.0 21 8607.0 22 13370.0 23 20043.0 24 29431.0 25 43768.0 26 60551.0 27 71826.0 28 81850.0 29 94029.0 30 112441.0 31 136094.0 32 165788.0 33 206878.0 34 291526.0 35 370016.0 36 371392.0 37 482518.0 38 723261.0 39 1270636.0 40 600.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.610196536597986 25.849198479644446 29.58085086203932 12.959754121718248 2 31.084362736175642 25.487815055094597 29.781879837766244 13.645942370963512 3 28.602099524018232 26.023943431523875 31.86453827402891 13.509418770428983 4 25.321415280786752 28.626828409788086 31.318443871890793 14.733312437534373 5 22.936183923333004 32.730421632978214 30.02102064807203 14.312373795616745 6 21.70771245540751 41.65789984954586 26.447926639537172 10.186461055509449 7 90.70463306298025 2.42375935574353 5.692133914473101 1.1794736668031245 8 90.83745499682291 2.1824939201767335 5.418911486578392 1.5611395964219559 9 84.48850522975413 6.179023552894736 6.973326753566029 2.359144463785105 10 26.113440532724596 49.374232150574166 12.833284160305386 11.679043156395856 11 30.807285318116634 24.710443146451734 27.344649919800872 17.137621615630756 12 28.92412262285646 23.228396558457533 28.240234225697847 19.60724659298817 13 25.987890512146393 24.7057558288656 29.689688624121157 19.616665034866855 14 21.671287179025526 27.26581975161159 30.21427393341074 20.84861913595214 15 20.843778494893563 26.912540567748056 32.686133052795185 19.557547884563196 16 24.719773974917594 26.19246783109273 30.55469584894221 18.533062345047465 17 23.743278682276745 25.931883637998027 28.680601141909417 21.64423653781581 18 23.643399391656267 25.6975396620444 30.384813441474567 20.27424750482476 19 24.67336076947356 26.559217577178106 28.21716999477167 20.550251658576663 20 26.09497600597173 27.051933507552604 28.302746395748475 18.550344090727194 21 25.885295205728344 25.86453082688882 29.678233170394293 18.57194079698855 22 25.206751226752054 23.441713315333157 29.772089038883053 21.579446419031736 23 21.842921854749665 26.94298622870474 29.796511277708014 21.41758063883758 24 21.231248813112046 26.90465536059381 31.31903526242736 20.545060563866784 25 21.97083743747414 28.73367296672815 28.932927770845367 20.362561824952344 26 22.125343690991 29.2988013828025 27.952906038338316 20.62294888786819 27 20.942715941326174 28.255522766235806 29.753274058478883 21.048487233959136 28 19.970557512620164 28.041373681938342 31.031685171714624 20.956383633726873 29 21.253261683084325 26.25202304846051 30.654137072498568 21.8405781959566 30 22.603537698189754 26.757705763933103 29.836156347011322 20.80260019086582 31 23.08773322416702 27.42937209000263 28.970973895364615 20.51192079046573 32 24.06298002567511 27.087066486095424 28.505461929672276 20.34449155855719 33 23.02239552155279 27.540684930996772 28.39489380268715 21.04202574476329 34 21.807328905789518 27.809088621186106 29.335117142418447 21.04846533060593 35 21.717853707942 28.037693918599693 28.824571882534066 21.419880490924236 36 23.09154440762491 28.322108959982796 27.983745959652712 20.60260067273959 37 21.616857346308006 29.10631471482601 28.696765816575624 20.580062122290364 38 22.010000633006907 28.769046882156236 28.0233472222496 21.197605262587256 39 21.98279666832475 27.85975107715215 28.20626212487496 21.951190129648136 40 22.914652927131268 27.65806500082904 28.553693113432427 20.87358895860726 41 20.735488316641884 27.33306304595477 28.722830806891057 23.20861783051229 42 21.789411962866804 27.422866794100376 28.419754108576235 22.36796713445658 43 22.093474312075912 27.217632374557855 28.763264396909786 21.92562891645645 44 21.984176579576744 27.659379202021416 28.848380827469256 21.50806339093258 45 21.292249651791444 27.931243622017337 28.25298197726388 22.523524748927336 46 22.003363916985418 28.017674253769183 28.192747755946705 21.786214073298694 47 21.324798034655924 27.80236429175179 29.385472951439606 21.48736472215268 48 21.396619129819204 28.030487715394838 29.248270346955685 21.324622807830274 49 21.91693328523357 27.09028627901674 29.239881362677693 21.752899073071998 50 21.247544907897495 27.866212566347993 29.350909460080153 21.535333065674354 51 21.134589315412885 27.530324644930214 28.705921418215834 22.62916462144106 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1631.0 1 3064.0 2 4497.0 3 23193.5 4 41890.0 5 29246.0 6 16602.0 7 16836.5 8 17071.0 9 17692.5 10 18314.0 11 18707.5 12 19101.0 13 19055.0 14 19009.0 15 18763.5 16 18518.0 17 18290.0 18 18062.0 19 17567.0 20 17072.0 21 17894.5 22 18717.0 23 21455.0 24 24193.0 25 28189.0 26 39845.5 27 47506.0 28 55092.0 29 62678.0 30 79394.0 31 96110.0 32 111676.5 33 127243.0 34 141649.5 35 156056.0 36 172932.0 37 189808.0 38 206919.0 39 224030.0 40 239072.5 41 254115.0 42 277293.0 43 300471.0 44 316098.0 45 331725.0 46 348300.0 47 364875.0 48 375660.0 49 386445.0 50 373589.5 51 360734.0 52 337609.0 53 314484.0 54 290148.0 55 265812.0 56 242359.5 57 218907.0 58 199768.5 59 180630.0 60 157409.5 61 134189.0 62 115866.5 63 97544.0 64 83753.5 65 69963.0 66 57074.0 67 44185.0 68 35633.0 69 27081.0 70 21544.5 71 16008.0 72 13990.0 73 11972.0 74 9576.0 75 5801.0 76 4422.0 77 3559.0 78 2696.0 79 1774.5 80 853.0 81 692.5 82 532.0 83 317.0 84 102.0 85 138.5 86 175.0 87 115.0 88 55.0 89 45.0 90 35.0 91 28.5 92 22.0 93 12.0 94 2.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4565511.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.993426797953592 #Duplication Level Percentage of deduplicated Percentage of total 1 77.38220920869712 13.92371116860622 2 8.612440842880247 3.099346477161429 3 2.7740677259631874 1.4974495367905258 4 1.371546211510553 0.9871526542730285 5 0.81738841446423 0.7353809300578739 6 0.5938650857110453 0.6411400768561277 7 0.4065747752305561 0.5120971419203811 8 0.35087584496703117 0.5050767065267512 9 0.2999612461723723 0.48575976527029663 >10 4.218944092304939 19.092296942932265 >50 1.922797938579832 24.91416976306511 >100 1.2442921061194583 32.27943994054939 >500 0.0036852493167038457 0.44392511280217206 >1k 0.0012284164389008768 0.3228867779233462 >5k 0.0 0.0 >10k+ 1.2284164389008768E-4 0.5601670052650166 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25343 0.5550966803058847 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3142011923747418E-4 0.0 0.0 0.04536184449013484 0.0 2 1.3142011923747418E-4 0.0 0.0 0.141386144946316 0.0 3 1.3142011923747418E-4 0.0 0.0 0.22343610605691236 0.0 4 1.3142011923747418E-4 0.0 0.0 0.3661364521956031 0.0 5 1.3142011923747418E-4 0.0 0.0 0.6171926866455912 0.0 6 1.3142011923747418E-4 0.0 0.0 0.986067057991975 0.0 7 1.3142011923747418E-4 0.0 0.0 1.157307473358404 0.0 8 1.5332347244371988E-4 0.0 0.0 1.6240679301834997 0.0 9 1.5332347244371988E-4 0.0 0.0 1.8074208998729824 0.0 10 1.5332347244371988E-4 0.0 0.0 2.1596706261358256 0.0 11 1.5332347244371988E-4 0.0 0.0 2.5107156679723257 0.0 12 1.5332347244371988E-4 0.0 0.0 2.823605068523545 0.0 13 1.5332347244371988E-4 0.0 0.0 2.969349980757904 0.0 14 1.5332347244371988E-4 0.0 0.0 3.0416529496917213 0.0 15 1.5332347244371988E-4 0.0 0.0 3.1394952284640207 0.0 16 1.5332347244371988E-4 0.0 0.0 3.313714499866499 0.0 17 1.5332347244371988E-4 0.0 0.0 3.5205040574866646 0.0 18 1.5332347244371988E-4 0.0 0.0 3.758440183366112 0.0 19 1.5332347244371988E-4 0.0 0.0 3.897723606404628 0.0 20 1.5332347244371988E-4 0.0 0.0 4.066248005973483 0.0 21 1.7522682564996558E-4 0.0 0.0 4.269839674025536 0.0 22 1.7522682564996558E-4 0.0 0.0 4.500525789993716 0.0 23 1.7522682564996558E-4 0.0 0.0 4.73252610715427 0.0 24 1.7522682564996558E-4 0.0 0.0 4.916054303669403 0.0 25 1.9713017885621129E-4 0.0 0.0 5.083636859050389 0.0 26 1.9713017885621129E-4 0.0 0.0 5.242107619497577 0.0 27 1.9713017885621129E-4 0.0 0.0 5.4124499973825495 0.0 28 1.9713017885621129E-4 0.0 0.0 5.587370176087627 0.0 29 1.9713017885621129E-4 0.0 0.0 5.781696725733439 0.0 30 1.9713017885621129E-4 0.0 0.0 6.004497634547371 0.0 31 1.9713017885621129E-4 0.0 0.0 6.198473730541882 0.0 32 2.4093688526870266E-4 0.0 0.0 6.390960398518369 0.0 33 2.4093688526870266E-4 0.0 0.0 6.586338309118081 0.0 34 2.4093688526870266E-4 0.0 0.0 6.787432994904623 0.0 35 2.4093688526870266E-4 0.0 0.0 7.0030715072201115 0.0 36 2.4093688526870266E-4 0.0 0.0 7.212401853812202 0.0 37 2.4093688526870266E-4 0.0 0.0 7.433625721195283 0.0 38 2.4093688526870266E-4 0.0 0.0 7.670160032469531 0.0 39 2.4093688526870266E-4 0.0 0.0 7.974791868861996 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15215 0.0 41.850147 1 TAGTACG 195 0.0 39.23077 1 CGACGGT 655 0.0 39.160305 28 CGCGTAA 110 0.0 38.863636 31 TAGGGAC 7025 0.0 38.658363 5 TACGGGA 2730 0.0 38.653843 4 TTAGGGA 9480 0.0 37.99842 4 TAGGGAT 9755 0.0 37.98821 5 TAAGGGA 9400 0.0 37.938828 4 GGGCGAT 8340 0.0 37.60791 7 CGTTAGG 820 0.0 37.591465 2 GTAGGGA 9735 0.0 37.465332 4 ATAGGGA 10170 0.0 37.433628 4 GCGGGAT 3840 0.0 37.14844 5 ATACCGG 200 0.0 37.125 2 CGGTCTA 700 0.0 36.964287 31 AGGGCGA 4420 0.0 36.906105 6 AGGGATC 6815 0.0 36.845196 6 TAGGGAG 10785 0.0 36.821976 5 TATGGGA 8210 0.0 36.805725 4 >>END_MODULE