##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547465_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1872793 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.320474820228398 31.0 31.0 33.0 30.0 34.0 2 31.726533044495575 31.0 31.0 34.0 30.0 34.0 3 31.865122306629722 31.0 31.0 34.0 30.0 34.0 4 35.60221124278017 37.0 35.0 37.0 33.0 37.0 5 35.48409728144007 37.0 35.0 37.0 33.0 37.0 6 35.52807865044348 37.0 35.0 37.0 33.0 37.0 7 35.932926383214806 37.0 35.0 37.0 35.0 37.0 8 35.97078961743236 37.0 35.0 37.0 35.0 37.0 9 37.72217057624628 39.0 37.0 39.0 35.0 39.0 10 37.06406527576726 39.0 37.0 39.0 33.0 39.0 11 36.85329184805796 39.0 37.0 39.0 32.0 39.0 12 36.22111787047474 38.0 35.0 39.0 32.0 39.0 13 35.932858570060866 38.0 35.0 39.0 31.0 39.0 14 37.00869823840649 39.0 35.0 41.0 31.0 41.0 15 37.221752217143056 39.0 35.0 41.0 32.0 41.0 16 37.31252733217179 39.0 35.0 41.0 32.0 41.0 17 37.258137444981905 39.0 35.0 41.0 32.0 41.0 18 37.16350392168275 39.0 35.0 41.0 32.0 41.0 19 37.09398102192821 38.0 35.0 41.0 32.0 41.0 20 36.967482791744736 38.0 35.0 41.0 32.0 41.0 21 36.88406139920429 38.0 35.0 41.0 32.0 41.0 22 36.8002315258547 38.0 35.0 41.0 31.0 41.0 23 36.730347667894954 38.0 35.0 40.0 31.0 41.0 24 36.6558482437728 38.0 35.0 40.0 31.0 41.0 25 36.56286466256548 38.0 35.0 40.0 31.0 41.0 26 36.42682773803619 38.0 35.0 40.0 31.0 41.0 27 36.34936002003425 38.0 35.0 40.0 31.0 41.0 28 36.27870405325095 38.0 35.0 40.0 30.0 41.0 29 36.346321777153165 38.0 35.0 40.0 31.0 41.0 30 36.29566481720083 38.0 35.0 40.0 30.0 41.0 31 36.19264542317277 38.0 35.0 40.0 30.0 41.0 32 36.04538195091502 38.0 35.0 40.0 30.0 41.0 33 35.90791988222938 38.0 35.0 40.0 30.0 41.0 34 35.777633192776776 38.0 35.0 40.0 29.0 41.0 35 35.65816617212901 38.0 35.0 40.0 29.0 41.0 36 35.572294428695535 38.0 35.0 40.0 28.0 41.0 37 35.501718556188536 38.0 34.0 40.0 27.0 41.0 38 35.39851120759208 38.0 34.0 40.0 27.0 41.0 39 35.32384785718443 38.0 34.0 40.0 27.0 41.0 40 35.162741424172346 38.0 34.0 40.0 26.0 41.0 41 35.116959001875806 38.0 34.0 40.0 26.0 41.0 42 35.056342051684304 38.0 34.0 40.0 26.0 41.0 43 35.00959849807213 38.0 34.0 40.0 26.0 41.0 44 34.895602984419526 37.0 34.0 40.0 25.0 41.0 45 34.77897824265683 37.0 34.0 40.0 24.0 41.0 46 34.745449176710935 37.0 34.0 40.0 25.0 41.0 47 34.70062788573003 37.0 34.0 40.0 25.0 41.0 48 34.628956323523205 37.0 34.0 40.0 24.0 41.0 49 34.59013622968475 37.0 34.0 40.0 24.0 41.0 50 34.450806362475724 36.0 34.0 40.0 24.0 41.0 51 33.8949024264828 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 4.0 12 2.0 13 3.0 14 10.0 15 48.0 16 116.0 17 307.0 18 686.0 19 1436.0 20 2471.0 21 4068.0 22 6272.0 23 9489.0 24 14098.0 25 20670.0 26 26392.0 27 31541.0 28 35440.0 29 41014.0 30 48369.0 31 58215.0 32 72592.0 33 92647.0 34 149893.0 35 225883.0 36 139454.0 37 174331.0 38 258811.0 39 458265.0 40 265.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.548338230653364 23.947814841255813 30.639638230172793 12.864208697918029 2 29.161738643833036 27.43042076727113 30.4753915675678 12.932449021328038 3 28.155327363995912 26.654894587922957 31.80906806037827 13.38070998770286 4 25.072445272915907 28.59157418892531 31.48554058029905 14.850439957859733 5 23.163585083882733 32.559498033151556 29.807405303202223 14.469511579763486 6 21.11461330750382 41.52909584775253 26.50527847978928 10.851012364954375 7 88.52793661659351 3.7148259311093113 6.240091670569037 1.5171457817281462 8 88.71023118945874 3.2124212339537794 5.567993900019917 2.509353676567565 9 83.38401521150496 6.631645889321456 7.5869570208773744 2.3973818782962133 10 35.653646719098155 40.02914363733739 12.776318578721726 11.540891064842725 11 37.44674398078164 23.739836703789475 24.163695613984036 14.649723701444847 12 35.29818832086622 22.522296911618103 24.988559867534747 17.190954899980937 13 23.27528990123308 33.67072602257697 26.038061868022787 17.01592220816716 14 17.063818585396252 36.902530071396036 27.61501137605704 18.418639967150668 15 16.761649578997787 26.892721192358156 40.13833883403024 16.20729039461382 16 19.027997221262574 24.78640191414641 38.675657160188024 17.509943704402996 17 18.423659208465644 24.559040961814787 28.377188509354745 28.640111320364824 18 20.332199020393602 26.112869922089626 33.155666429765596 20.399264627751172 19 24.819454152167378 27.781340489845913 26.826670112500423 20.572535245486286 20 27.479331672000058 25.691307047815748 27.954237334291616 18.87512394589258 21 22.996775404436047 28.516338965384858 29.347984534329207 19.13890109584989 22 23.364194547929216 25.686875164526988 27.089325942589493 23.859604344954302 23 19.20489877952342 30.24172986550035 27.533422006596563 23.01994934837967 24 19.336039807923246 26.262379237854905 35.15247013417927 19.249110820042578 25 18.38815074597139 27.64272399565782 33.21434883620347 20.75477642216732 26 18.19266731560829 33.829472878209174 27.711551677094054 20.26630812908848 27 18.45868710530208 34.31564513536733 28.182559417938872 19.043108341391708 28 16.65330872125216 30.605304483730983 34.3884241344345 18.35296266058235 29 17.326901584958936 26.534112419258292 33.728340505330806 22.410645490451962 30 18.802184758272805 31.12025728417396 30.637715967541528 19.43984199001171 31 24.300069468435648 29.791012674652244 25.993849827503627 19.915068029408484 32 25.03036907976482 29.12307980647087 28.00528408638862 17.84126702737569 33 25.33205752050547 30.317232069961815 25.52529831113209 18.825412098400623 34 19.673557088263358 29.404851470504216 28.82112438480921 22.100467056423216 35 20.470655326029092 28.514737079858797 28.894063572428983 22.120544021683124 36 26.15569366181954 27.389305705435678 27.34552083439013 19.109479798354652 37 20.888373675040434 31.121004830752785 29.058523819770794 18.932097674435987 38 20.57605939364361 31.348686160189622 26.01456754697396 22.06068689919281 39 21.04263525119968 30.65992878016951 28.588263625504794 19.709172343126017 40 23.496670480934092 27.321118778209875 28.020181621780942 21.162029119075093 41 19.12736752006228 27.10048574508768 28.91878600571446 24.853360729135574 42 21.951972268157775 26.09177842932988 27.768899178926876 24.187350123585468 43 20.952876265556313 26.77546317185081 28.322671005284622 23.948989557308256 44 20.260007379352658 28.50037350630849 28.832764752965222 22.406854361373625 45 19.4283084142241 32.93033453243364 24.766752118360117 22.874604934982138 46 21.76487203871437 31.19704099705627 27.36549100728164 19.672595956947724 47 21.47423660810351 28.51553802262183 27.660451528812846 22.34977384046181 48 21.74677073226993 26.534753173468715 30.884993696580455 20.833482397680896 49 21.470231894288368 25.784429993063835 30.494293816775265 22.25104429587253 50 19.7710051244318 30.49295891217022 28.437899970792284 21.298135992605697 51 18.696513709737275 30.024087018693468 27.012916002996594 24.26648326857266 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1511.0 1 2126.5 2 2742.0 3 9592.0 4 16442.0 5 11294.5 6 6147.0 7 6805.5 8 7464.0 9 8470.5 10 9477.0 11 10128.0 12 10779.0 13 11108.5 14 11438.0 15 11098.5 16 10759.0 17 10507.5 18 10256.0 19 10373.5 20 10491.0 21 10011.5 22 9532.0 23 10840.0 24 12148.0 25 13969.5 26 19366.0 27 22941.0 28 24086.0 29 25231.0 30 31566.5 31 37902.0 32 42836.0 33 47770.0 34 49104.0 35 50438.0 36 59059.0 37 67680.0 38 73822.5 39 79965.0 40 100790.5 41 121616.0 42 137726.5 43 153837.0 44 160752.0 45 167667.0 46 173607.5 47 179548.0 48 176006.0 49 172464.0 50 158774.5 51 145085.0 52 129818.5 53 114552.0 54 104526.5 55 94501.0 56 82567.0 57 70633.0 58 65343.0 59 60053.0 60 54957.5 61 49862.0 62 40776.0 63 31690.0 64 24800.0 65 17910.0 66 14223.0 67 10536.0 68 8764.5 69 6993.0 70 5474.0 71 3955.0 72 2940.5 73 1926.0 74 1703.0 75 1155.0 76 830.0 77 665.5 78 501.0 79 300.5 80 100.0 81 107.0 82 114.0 83 71.5 84 29.0 85 16.5 86 4.0 87 2.5 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1872793.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.70297028384886 #Duplication Level Percentage of deduplicated Percentage of total 1 79.14517617334093 13.219595257332962 2 8.91181824393023 2.977076706068575 3 3.126297801129901 1.5665537781220433 4 1.5686220598456453 1.048025906087664 5 0.8710941974440624 0.7274930247170672 6 0.5867748069725078 0.588052929850377 7 0.40535822166513463 0.4739480431550593 8 0.28854614135656403 0.3855662099678353 9 0.22997032468458842 0.34570687494363783 >10 1.9054919729434603 7.327092393374629 >50 1.047212774490913 12.99718242226778 >100 1.900700744881884 55.73396316308163 >500 0.00905557611990654 0.9550674046371027 >1k 0.0032341343285380497 0.7685375546251165 >5k 3.23413432853805E-4 0.2874385554340511 >10k+ 3.23413432853805E-4 0.5986997763344463 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11083 0.5917899095094866 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5321 0.2841210961382278 No Hit GAGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCT 2486 0.13274291392588503 No Hit AAGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCT 1879 0.1003314301153411 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09045313603799246 0.0 2 0.0 0.0 0.0 0.3033971186351081 0.0 3 0.0 0.0 0.0 0.4409456891391627 0.0 4 0.0 0.0 0.0 0.8847747722252273 0.0 5 0.0 0.0 0.0 1.3327687576790388 0.0 6 0.0 0.0 0.0 1.951096570736862 0.0 7 0.0 0.0 0.0 2.19271430425039 0.0 8 0.0 0.0 0.0 2.800683257573047 0.0 9 0.0 0.0 0.0 2.9810021716228117 0.0 10 0.0 0.0 0.0 3.360435456561403 0.0 11 0.0 0.0 0.0 3.884572400687102 0.0 12 0.0 0.0 0.0 4.298606412988515 0.0 13 0.0 0.0 0.0 4.462746283225108 0.0 14 0.0 0.0 0.0 4.528797363082839 0.0 15 0.0 0.0 0.0 4.635749920039214 0.0 16 0.0 0.0 0.0 4.881212178815278 0.0 17 0.0 0.0 0.0 5.144295178377963 0.0 18 0.0 0.0 0.0 5.495054712400142 0.0 19 0.0 0.0 0.0 5.673130986713428 0.0 20 0.0 0.0 0.0 5.847095754843167 0.0 21 0.0 0.0 0.0 6.077820666779511 0.0 22 0.0 0.0 0.0 6.300322566348764 0.0 23 0.0 0.0 0.0 6.551711801571236 0.0 24 0.0 0.0 0.0 6.732351092726212 0.0 25 0.0 0.0 0.0 6.8927532300686725 0.0 26 0.0 0.0 0.0 7.04594688254388 0.0 27 0.0 0.0 0.0 7.195776575414368 0.0 28 0.0 0.0 0.0 7.358047579203895 0.0 29 0.0 0.0 0.0 7.527153294571264 0.0 30 0.0 0.0 0.0 7.742767086378473 0.0 31 0.0 0.0 0.0 7.940226175557043 0.0 32 0.0 0.0 0.0 8.122307163685468 0.0 33 0.0 0.0 0.0 8.299315514314715 0.0 34 0.0 0.0 0.0 8.489085552968215 0.0 35 0.0 0.0 0.0 8.720344426746577 0.0 36 0.0 0.0 0.0 8.912410501320755 0.0 37 0.0 0.0 0.0 9.122204109049958 0.0 38 0.0 0.0 0.0 9.324575647175102 0.0 39 0.0 0.0 0.0 9.542538871087194 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTCGA 60 0.0 45.000004 14 CGCATTA 30 2.1662363E-6 45.000004 44 GTAGCGT 30 2.1662363E-6 45.000004 38 CGCTCGA 30 2.1662363E-6 45.000004 19 CGTAGCG 30 2.1662363E-6 45.000004 4 ACGTACA 30 2.1662363E-6 45.000004 25 CCAACCG 30 2.1662363E-6 45.000004 25 ATACGTC 60 0.0 45.000004 26 AACCGTA 25 3.8917497E-5 45.0 12 TACCCGT 25 3.8917497E-5 45.0 44 CGACGTG 25 3.8917497E-5 45.0 40 GCGCGAC 35 1.2124838E-7 45.0 9 CGTCTAG 20 7.034425E-4 45.0 11 CGCGACA 35 1.2124838E-7 45.0 24 TAACGCG 25 3.8917497E-5 45.0 1 CTACGCT 20 7.034425E-4 45.0 31 AACGCTA 25 3.8917497E-5 45.0 43 ACTACGC 20 7.034425E-4 45.0 26 ACTAACG 40 6.8193913E-9 45.0 21 TCCCGAA 45 3.8562575E-10 45.0 36 >>END_MODULE