##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547464_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2098428 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.230220908222726 31.0 31.0 33.0 30.0 34.0 2 31.627254783104306 31.0 31.0 34.0 30.0 34.0 3 31.76940738495674 31.0 31.0 34.0 30.0 34.0 4 35.511598205895076 37.0 35.0 37.0 33.0 37.0 5 35.365927256022125 37.0 35.0 37.0 33.0 37.0 6 35.42078498761931 37.0 35.0 37.0 33.0 37.0 7 35.8697124704779 37.0 35.0 37.0 35.0 37.0 8 35.9008638847747 37.0 35.0 37.0 35.0 37.0 9 37.61987449652788 39.0 37.0 39.0 35.0 39.0 10 36.94028482273397 39.0 37.0 39.0 32.0 39.0 11 36.7622067566769 39.0 35.0 39.0 32.0 39.0 12 36.2104785105803 38.0 35.0 39.0 32.0 39.0 13 35.98317311816274 38.0 35.0 39.0 31.0 39.0 14 37.06811622795731 39.0 35.0 41.0 31.0 41.0 15 37.23419721810803 39.0 35.0 41.0 32.0 41.0 16 37.30788142361806 39.0 35.0 41.0 32.0 41.0 17 37.22365694700986 39.0 35.0 41.0 32.0 41.0 18 37.148397752984614 39.0 35.0 41.0 32.0 41.0 19 37.09623823166675 39.0 35.0 41.0 32.0 41.0 20 36.970727611335725 39.0 35.0 41.0 31.0 41.0 21 36.90948605336948 39.0 35.0 41.0 31.0 41.0 22 36.81948534807961 38.0 35.0 41.0 31.0 41.0 23 36.74441963221993 38.0 35.0 40.0 31.0 41.0 24 36.64353411220208 38.0 35.0 40.0 31.0 41.0 25 36.5503505481246 38.0 35.0 40.0 31.0 41.0 26 36.412528330731384 38.0 35.0 40.0 30.0 41.0 27 36.304840099350564 38.0 35.0 40.0 30.0 41.0 28 36.221632574479564 38.0 35.0 40.0 30.0 41.0 29 36.26034298055497 38.0 35.0 40.0 30.0 41.0 30 36.2428927749725 38.0 35.0 40.0 30.0 41.0 31 36.134127070359334 38.0 35.0 40.0 30.0 41.0 32 36.043106077501825 38.0 35.0 40.0 30.0 41.0 33 35.93475925788257 38.0 35.0 40.0 30.0 41.0 34 35.80729002853565 38.0 35.0 40.0 29.0 41.0 35 35.70488336983685 38.0 35.0 40.0 29.0 41.0 36 35.622716147516144 38.0 35.0 40.0 27.0 41.0 37 35.543581671613225 38.0 34.0 40.0 27.0 41.0 38 35.45751486350735 38.0 34.0 40.0 27.0 41.0 39 35.37314980547343 38.0 34.0 40.0 27.0 41.0 40 35.22836904578094 38.0 34.0 40.0 26.0 41.0 41 35.15671588446208 38.0 34.0 40.0 26.0 41.0 42 35.09231148269085 38.0 34.0 40.0 26.0 41.0 43 35.038222898283855 38.0 34.0 40.0 26.0 41.0 44 34.89775060187912 38.0 34.0 40.0 25.0 41.0 45 34.789544840232786 37.0 34.0 40.0 24.0 41.0 46 34.74329831664465 37.0 34.0 40.0 24.0 41.0 47 34.69756503439718 37.0 33.0 40.0 24.0 41.0 48 34.63958210622428 37.0 34.0 40.0 24.0 41.0 49 34.57363702733665 37.0 33.0 40.0 24.0 41.0 50 34.428452155613634 37.0 33.0 40.0 24.0 41.0 51 33.86891473045537 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 6.0 14 22.0 15 38.0 16 140.0 17 407.0 18 989.0 19 1781.0 20 3208.0 21 5106.0 22 7712.0 23 11206.0 24 16349.0 25 23020.0 26 30201.0 27 36180.0 28 41429.0 29 47974.0 30 57091.0 31 67816.0 32 81794.0 33 103597.0 34 158356.0 35 227939.0 36 161172.0 37 198995.0 38 295110.0 39 520466.0 40 321.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.56261353737179 24.035039562949027 29.858922965191088 13.543423934488102 2 28.408551544298877 27.24839737174685 30.76064558803066 13.582405495923616 3 29.091681963831974 25.71115139523491 32.35874664272493 12.838419998208185 4 25.785159176297682 29.44742445297146 30.528519444079095 14.238896926651758 5 23.219619639082207 32.68427603901588 30.35071968159022 13.7453846403117 6 21.410884719418537 42.481943626371745 25.944707180803917 10.162464473405807 7 88.72556027654987 3.6881417899494293 6.0328016972705285 1.5534962362301685 8 88.28489707533448 3.5528976929396676 5.436736452239486 2.7254687794863584 9 82.39434471899918 7.421317290848196 7.570190637944213 2.6141473522084153 10 31.233761653961917 45.69911381281607 11.940033205809302 11.12709132741271 11 35.441578171850544 23.005602288951536 25.705194555162247 15.847624984035669 12 33.714523443263246 22.98601619879262 26.020001639322388 17.279458718621747 13 23.801912669865253 31.995331743571853 27.12020617338312 17.08254941317977 14 18.760043232362513 33.823605098673866 28.538887205088763 18.877464463874862 15 16.91575789114518 27.355143945848987 37.939543315281725 17.789554847724105 16 20.47818652820111 24.456497911770146 36.10955439023879 18.955761169789955 17 19.23706698538144 26.14981309818588 28.284649270787465 26.32847064564522 18 20.507446526638034 26.87592807568332 32.04889564950525 20.567729748173395 19 25.23284096476029 27.07874656647738 27.350664402114344 20.337748066647986 20 26.107924598794906 26.294921722355973 28.13687198226482 19.4602816965843 21 23.25388338318017 28.201968330578893 29.723440594578417 18.82070769166252 22 23.53104323808108 25.06233237452036 27.180632359080224 24.22599202831834 23 20.030518083060272 29.19342479227307 27.527034522985776 23.249022601680878 24 19.170159757685276 26.57570333602106 35.17556952156567 19.078567384727997 25 19.17435337309643 27.97165306600941 31.566486913060633 21.28750664783352 26 19.684115919154717 32.69209141319121 27.326980005985433 20.29681266166864 27 19.199943958048596 33.31417613565964 27.972463196259294 19.513416710032462 28 17.811666638073834 30.224434672049743 33.13475611267101 18.829142577205413 29 18.54478685949673 26.70179772667921 32.349263353329256 22.40415206049481 30 20.168621463304913 30.59890546637769 29.496127577405563 19.736345492911838 31 22.886989689424656 29.05837131414564 27.985044042492763 20.06959495393695 32 25.163312727432153 27.921996847163687 28.79488836405157 18.119802061352594 33 24.54403963347801 28.685711399199782 26.125795119012903 20.644453848309304 34 19.638462696837824 28.31376630506265 28.724168758708903 23.323602239390627 35 21.487847093157352 26.154530915523427 29.32552367772447 23.032098313594748 36 25.21721021640962 27.209701738634827 27.797189133961233 19.775898910994325 37 20.38373487200895 31.000015249510586 28.3294447081339 20.286805170346565 38 20.003021309284854 30.722760085168517 27.292239714681653 21.98197889086497 39 20.45059444498453 30.09605285480369 28.978597311892525 20.474755388319256 40 22.821083210860703 27.479904004330862 27.76406910315722 21.934943681651216 41 19.03729839670458 26.601007992649734 28.251767513586362 26.109926097059322 42 21.121048708843002 26.83494501598339 27.226714473882353 24.81729180129125 43 21.021736271151546 26.577800143726638 29.14495994144188 23.255503643679937 44 19.84333034061688 28.10074970406419 29.134857140678644 22.92106281464029 45 19.341669097057416 30.52165716431538 26.629886753322012 23.50678698530519 46 20.879153347172263 30.44250267342982 27.534754587719952 21.14358939167796 47 20.74414752376541 27.187304019961612 28.48680059549339 23.581747860779593 48 20.31530269325419 25.931649787364634 31.372627509735864 22.380420009645317 49 21.477029471585396 25.37442313960736 31.171000386956333 21.97754700185091 50 19.87049353134823 28.46974020552528 29.513616859858903 22.14614940326759 51 19.029768950852734 27.815250273061547 28.271782496230514 24.883198279855208 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1609.0 1 2383.0 2 3157.0 3 10512.0 4 17867.0 5 12436.5 6 7006.0 7 7389.5 8 7773.0 9 8698.0 10 9623.0 11 10186.0 12 10749.0 13 11033.0 14 11317.0 15 11069.0 16 10821.0 17 10335.5 18 9850.0 19 9789.5 20 9729.0 21 10273.5 22 10818.0 23 11894.0 24 12970.0 25 16677.5 26 20700.0 27 21015.0 28 26171.0 29 31327.0 30 34996.0 31 38665.0 32 45971.5 33 53278.0 34 59626.0 35 65974.0 36 70414.0 37 74854.0 38 84051.5 39 93249.0 40 114251.0 41 135253.0 42 153774.0 43 172295.0 44 176646.5 45 180998.0 46 187633.5 47 194269.0 48 191174.0 49 188079.0 50 177128.5 51 166178.0 52 149588.0 53 132998.0 54 115643.5 55 98289.0 56 90762.0 57 83235.0 58 74997.5 59 66760.0 60 59276.5 61 51793.0 62 47241.0 63 42689.0 64 33850.5 65 25012.0 66 20548.0 67 16084.0 68 12804.0 69 9524.0 70 7426.5 71 5329.0 72 4266.5 73 3204.0 74 2607.0 75 1585.0 76 1160.0 77 947.5 78 735.0 79 539.0 80 343.0 81 214.0 82 85.0 83 53.5 84 22.0 85 26.0 86 30.0 87 21.5 88 13.0 89 7.0 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2098428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.867577315902274 #Duplication Level Percentage of deduplicated Percentage of total 1 78.40486753477327 14.00905032620637 2 9.20655726036247 3.289977473256156 3 3.301071069511542 1.7694642767935704 4 1.5999606538032933 1.1434968273692758 5 0.9086847201749269 0.8117997246752263 6 0.6156007300004103 0.6599576183404925 7 0.41976264509333966 0.5250099060873025 8 0.30444136918728987 0.4351703761690439 9 0.2185508103821706 0.3514476151760877 >10 2.1555692582859916 9.289211094656403 >50 1.1902177696103233 15.657475113092392 >100 1.6620371098071531 49.29096679080196 >500 0.009172092473770418 1.092280671038949 >1k 0.0032372091083895595 1.0894850186440743 >5k 0.0 0.0 >10k+ 2.6976742569912994E-4 0.5852071676926826 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12141 0.578575962577701 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3552 0.1692695675048179 No Hit GAGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCT 2705 0.12890601917244718 No Hit AAGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCT 2219 0.10574582496992986 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 2175 0.10364901726435218 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.530944116262269E-5 0.0 0.0 0.10698484770504396 0.0 2 9.530944116262269E-5 0.0 0.0 0.33811024252440397 0.0 3 9.530944116262269E-5 0.0 0.0 0.49970740001563074 0.0 4 9.530944116262269E-5 0.0 0.0 0.9685345410945717 0.0 5 9.530944116262269E-5 0.0 0.0 1.468766143036597 0.0 6 9.530944116262269E-5 0.0 0.0 2.132119853528451 0.0 7 9.530944116262269E-5 0.0 0.0 2.3922193184612484 0.0 8 9.530944116262269E-5 0.0 0.0 3.137300874750051 0.0 9 9.530944116262269E-5 0.0 0.0 3.351699462645371 0.0 10 9.530944116262269E-5 0.0 0.0 3.811567516255025 0.0 11 9.530944116262269E-5 0.0 0.0 4.412684161667687 0.0 12 9.530944116262269E-5 0.0 0.0 4.913344656094943 0.0 13 9.530944116262269E-5 0.0 0.0 5.1105398898604095 0.0 14 9.530944116262269E-5 0.0 0.0 5.196890243553746 0.0 15 9.530944116262269E-5 0.0 0.0 5.335470171004199 0.0 16 9.530944116262269E-5 0.0 0.0 5.631787223578793 0.0 17 9.530944116262269E-5 0.0 0.0 5.961843818324955 0.0 18 9.530944116262269E-5 0.0 0.0 6.39264249238001 0.0 19 9.530944116262269E-5 0.0 0.0 6.593507139630238 0.0 20 9.530944116262269E-5 0.0 0.0 6.816149994186124 0.0 21 9.530944116262269E-5 0.0 0.0 7.097980011703999 0.0 22 9.530944116262269E-5 0.0 0.0 7.392152601852434 0.0 23 9.530944116262269E-5 0.0 0.0 7.6808925538546 0.0 24 9.530944116262269E-5 0.0 0.0 7.916688111290928 0.0 25 9.530944116262269E-5 0.0 0.0 8.109022563557101 0.0 26 9.530944116262269E-5 0.0 0.0 8.29144483394236 0.0 27 9.530944116262269E-5 0.0 0.0 8.465241599902404 0.0 28 9.530944116262269E-5 0.0 0.0 8.661626703417987 0.0 29 9.530944116262269E-5 0.0 0.0 8.882077440827134 0.0 30 9.530944116262269E-5 0.0 0.0 9.139412931966215 0.0 31 1.4296416174393404E-4 0.0 0.0 9.372587479770571 0.0 32 1.4296416174393404E-4 0.0 0.0 9.58913053009205 0.0 33 1.4296416174393404E-4 0.0 0.0 9.800765144193653 0.0 34 1.4296416174393404E-4 0.0 0.0 10.02741099527837 0.0 35 1.4296416174393404E-4 0.0 0.0 10.278408408580137 0.0 36 1.4296416174393404E-4 0.0 0.0 10.52016080608913 0.0 37 1.4296416174393404E-4 0.0 0.0 10.754622031349182 0.0 38 1.4296416174393404E-4 0.0 0.0 10.99008400574144 0.0 39 1.4296416174393404E-4 0.0 0.0 11.23393321095601 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGGA 40 6.8193913E-9 45.000004 8 CATGCGT 30 2.1663618E-6 45.000004 30 CGCATCG 35 1.2125747E-7 45.000004 21 GTCACGA 20 7.0346193E-4 45.000004 41 CGTAAGA 20 7.0346193E-4 45.000004 34 CGTAAAC 20 7.0346193E-4 45.000004 38 ACCGTTA 40 6.8193913E-9 45.000004 35 ACGTATC 20 7.0346193E-4 45.000004 35 AACTCGC 20 7.0346193E-4 45.000004 16 CACCGTA 30 2.1663618E-6 45.000004 40 GCCCGTA 30 2.1663618E-6 45.000004 14 GCGTACA 20 7.0346193E-4 45.000004 12 CCGAATA 25 3.8919105E-5 45.0 41 CGACGGT 495 0.0 43.636364 28 TATAGCG 95 0.0 42.63158 1 CGGTCTA 520 0.0 42.403843 31 ATACGAA 365 0.0 41.917805 19 CATACGA 385 0.0 41.493507 18 CGTTTTT 6325 0.0 41.47826 1 CGATCAT 60 3.6379788E-12 41.250004 10 >>END_MODULE