##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547463_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4345635 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.327001692502936 31.0 31.0 33.0 30.0 34.0 2 31.74440283180709 31.0 31.0 34.0 30.0 34.0 3 31.869898415306395 31.0 31.0 34.0 30.0 34.0 4 35.62710835125361 37.0 35.0 37.0 33.0 37.0 5 35.51278466783335 37.0 35.0 37.0 33.0 37.0 6 35.565866668507596 37.0 35.0 37.0 33.0 37.0 7 35.97313511143941 37.0 35.0 37.0 35.0 37.0 8 36.01057198775323 37.0 35.0 37.0 35.0 37.0 9 37.763874094349845 39.0 38.0 39.0 35.0 39.0 10 37.05961407251184 39.0 37.0 39.0 33.0 39.0 11 36.91240520660387 39.0 37.0 39.0 32.0 39.0 12 36.66250409894066 39.0 35.0 39.0 32.0 39.0 13 36.59185665616187 39.0 35.0 39.0 32.0 39.0 14 37.71534401761768 40.0 36.0 41.0 32.0 41.0 15 37.78675015273947 40.0 36.0 41.0 32.0 41.0 16 37.802844463467366 40.0 36.0 41.0 33.0 41.0 17 37.73591385378661 40.0 36.0 41.0 32.0 41.0 18 37.61259815884215 39.0 36.0 41.0 32.0 41.0 19 37.569972397589765 39.0 36.0 41.0 32.0 41.0 20 37.45947347165604 39.0 35.0 41.0 32.0 41.0 21 37.42590714590618 39.0 35.0 41.0 32.0 41.0 22 37.35345927580204 39.0 35.0 41.0 32.0 41.0 23 37.25503016245037 39.0 35.0 41.0 32.0 41.0 24 37.18827812275997 39.0 35.0 41.0 32.0 41.0 25 37.08496917021333 39.0 35.0 41.0 31.0 41.0 26 36.97560793762016 39.0 35.0 41.0 31.0 41.0 27 36.88517719504745 39.0 35.0 41.0 31.0 41.0 28 36.76896080779909 39.0 35.0 40.0 31.0 41.0 29 36.83308814477056 39.0 35.0 41.0 31.0 41.0 30 36.78368615863965 39.0 35.0 41.0 31.0 41.0 31 36.71504302593292 39.0 35.0 41.0 30.0 41.0 32 36.66063210554959 39.0 35.0 41.0 30.0 41.0 33 36.561014443228665 39.0 35.0 41.0 30.0 41.0 34 36.40973275482179 39.0 35.0 41.0 30.0 41.0 35 36.298715607730514 39.0 35.0 41.0 30.0 41.0 36 36.262464749110315 39.0 35.0 41.0 30.0 41.0 37 36.22954735038723 39.0 35.0 41.0 29.0 41.0 38 36.12703298827444 39.0 35.0 41.0 29.0 41.0 39 36.053854499975266 39.0 35.0 41.0 29.0 41.0 40 35.98064701706425 39.0 35.0 41.0 28.0 41.0 41 35.88394630474028 39.0 35.0 41.0 28.0 41.0 42 35.847806822248074 39.0 35.0 41.0 28.0 41.0 43 35.84165145024835 39.0 35.0 41.0 28.0 41.0 44 35.72631203495001 38.0 35.0 41.0 27.0 41.0 45 35.60941910675885 38.0 35.0 40.0 27.0 41.0 46 35.58132631939866 38.0 34.0 40.0 27.0 41.0 47 35.534091105212475 38.0 34.0 40.0 27.0 41.0 48 35.45029644689441 38.0 34.0 40.0 27.0 41.0 49 35.37238723454685 38.0 34.0 40.0 27.0 41.0 50 35.295913945833 38.0 34.0 40.0 26.0 41.0 51 34.74783524156999 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 2.0 12 4.0 13 6.0 14 17.0 15 77.0 16 182.0 17 535.0 18 1230.0 19 2391.0 20 4177.0 21 7246.0 22 11065.0 23 17117.0 24 26056.0 25 39439.0 26 54259.0 27 64940.0 28 72484.0 29 82836.0 30 99480.0 31 122149.0 32 149458.0 33 190286.0 34 271609.0 35 349003.0 36 351703.0 37 456316.0 38 694061.0 39 1276839.0 40 665.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.34783869330949 24.980284814532283 28.731290133662856 13.940586358495363 2 30.74864778104926 26.074923457676498 30.2533001506109 12.923128610663342 3 27.89569303450474 25.90776721929016 32.78068682712653 13.415852919078569 4 24.870887683848274 28.5823360682616 32.12319948638116 14.423576761508963 5 22.419462288020046 32.54233270856848 30.898637368301756 14.139567635109715 6 21.526773417463733 41.44623282903419 26.8940442536016 10.132949499900475 7 90.35708245170153 2.2720269880006025 6.169040888155585 1.2018496721422762 8 90.75108701029883 1.9621988501105132 5.771055323330192 1.5156588162604545 9 84.79975883846664 5.616371370352089 7.332829379365731 2.2510404118155343 10 27.083360659604406 44.362814640438046 14.83021468669136 13.723610013266185 11 27.903378907800587 25.25313331653487 28.90380807407893 17.939679701585614 12 28.620466283983813 22.897021954213827 29.04321232685212 19.439299434950243 13 24.853536939940884 24.20493207551946 31.010726855798982 19.93080412874068 14 20.36639064256432 27.670432514465666 31.152225163871332 20.810951679098682 15 19.368745879485967 27.356991555894595 33.97956800329526 19.29469456132418 16 23.694903046390227 26.25353947121652 31.995255008761664 18.056302473631586 17 22.900174542960926 26.36401814694515 30.00951529523303 20.72629201486089 18 22.707659525017633 25.89867763859597 32.031705377925206 19.36195745846119 19 23.78842217535527 27.085040506163082 29.335137442514153 19.791399875967493 20 24.566030050844123 27.351905993025184 29.69977920372972 18.382284752400974 21 24.55622711065241 25.93464476422893 31.086043811778946 18.423084313339707 22 23.872253422112074 23.70355540674723 31.482717715592774 20.941473455547925 23 21.55519273938101 26.92669770931061 31.063446423825287 20.454663127483094 24 20.800251286635902 26.444029468650726 32.65531964833678 20.100399596376594 25 21.27716662812224 28.146956658808207 30.361960910200697 20.213915802868858 26 21.09162412397728 29.474725788060894 28.960600694720107 20.473049393241723 27 20.176637016224326 28.802395967447797 30.462383518173986 20.558583498153897 28 19.261097630150715 28.442310502377673 32.03927619323758 20.25731567423403 29 20.478963373592123 26.479720455123356 31.490495635275394 21.550820536009123 30 21.155274200433308 27.269984708794 31.170197220889467 20.404543869883227 31 22.278079037931164 27.265359377858474 30.024357775100764 20.432203809109602 32 23.013230517519304 27.55983878075356 30.00327915252892 19.42365154919822 33 23.06484552890429 27.55567368175192 29.19041751090462 20.18906327843917 34 20.956707132559455 27.5675706772428 30.56002172294728 20.91570046725047 35 21.81161096134397 27.8493937019561 29.795553469170788 20.54344186752914 36 22.80014313213144 28.299891730437555 28.94318091602263 19.956784221408377 37 21.390682834614505 29.634219164748078 29.2483607113805 19.72673728925692 38 21.447291362482122 29.11047522398913 28.97229058584073 20.469942827688016 39 21.335132840194817 28.78375657412553 28.774137726707373 21.106972858972277 40 22.42468592046962 27.577005431887397 29.775878553997288 20.222430093645695 41 20.052213312899035 27.967650297367356 29.989104008965317 21.99103238076829 42 20.85964421770351 28.47194943891974 29.30724738732084 21.361158956055903 43 21.30703568063125 27.77251195740093 29.55492120254002 21.365531159427796 44 21.32236140402956 27.963600256349185 29.3999150872082 21.314123252413054 45 20.745644767680673 28.17878169703622 28.77494313259167 22.30063040269144 46 21.065344880552555 28.74558033520993 29.153760037370834 21.035314746866685 47 21.14266384544491 28.06404587591917 29.91509871399692 20.878191564639 48 20.94377461521734 27.836783346967703 30.462498576157454 20.7569434616575 49 21.246054949391745 27.760499903926583 30.014370742135497 20.97907440454617 50 20.449462506630216 27.9127676392518 30.410078158888172 21.22769169522981 51 20.47153062785991 27.78162454969182 29.821970782175676 21.924874040272595 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1662.0 1 3126.5 2 4591.0 3 27432.5 4 50274.0 5 34468.0 6 18662.0 7 18371.0 8 18080.0 9 18634.5 10 19189.0 11 19543.5 12 19898.0 13 19656.5 14 19415.0 15 18994.0 16 18573.0 17 17963.5 18 17354.0 19 17423.5 20 17493.0 21 20467.5 22 23442.0 23 24997.0 24 26552.0 25 32838.0 26 47537.0 27 55950.0 28 67051.0 29 78152.0 30 91115.5 31 104079.0 32 119884.0 33 135689.0 34 151723.0 35 167757.0 36 178360.0 37 188963.0 38 205205.0 39 221447.0 40 240210.5 41 258974.0 42 276108.5 43 293243.0 44 303781.0 45 314319.0 46 329039.5 47 343760.0 48 352191.5 49 360623.0 50 342719.0 51 324815.0 52 297768.0 53 270721.0 54 250967.5 55 231214.0 56 214681.0 57 198148.0 58 180586.0 59 163024.0 60 140708.0 61 118392.0 62 101900.0 63 85408.0 64 71320.5 65 57233.0 66 44822.0 67 32411.0 68 26177.0 69 19943.0 70 15934.5 71 11926.0 72 9414.0 73 6902.0 74 5439.0 75 3090.0 76 2204.0 77 1685.0 78 1166.0 79 826.0 80 486.0 81 349.5 82 213.0 83 140.0 84 67.0 85 73.0 86 79.0 87 53.0 88 27.0 89 16.5 90 6.0 91 5.5 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4345635.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.158403406055136 #Duplication Level Percentage of deduplicated Percentage of total 1 76.56805911711923 13.90353705467329 2 8.587192782700452 3.1185942134767997 3 2.7768152856254655 1.5126759642146226 4 1.4696397676732265 1.067452470519664 5 0.9605392900732743 0.8720929958258165 6 0.6397761301655416 0.6970387836666447 7 0.4809250855214658 0.611298219769324 8 0.3855341107065082 0.5600547127202798 9 0.3309130305189307 0.540796707043468 >10 4.61137566248507 21.173077091146546 >50 2.0810184091900257 27.21827434360139 >100 1.1032065071180956 27.200637768666976 >500 0.0035932048942287466 0.4333556891508257 >1k 0.0012832874622243698 0.34790559977529256 >5k 0.0 0.0 >10k+ 1.28328746222437E-4 0.7432083857490409 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31894 0.7339318649633483 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04873856179821821 0.0 2 0.0 0.0 0.0 0.13880595125913706 0.0 3 0.0 0.0 0.0 0.21791982069363855 0.0 4 0.0 0.0 0.0 0.3564036095990574 0.0 5 0.0 0.0 0.0 0.5944355658033866 0.0 6 0.0 0.0 0.0 0.9628052056834041 0.0 7 0.0 0.0 0.0 1.1514082521886906 0.0 8 0.0 0.0 0.0 1.6435802822832566 0.0 9 0.0 0.0 0.0 1.843090825621572 0.0 10 0.0 0.0 0.0 2.197653507485097 0.0 11 0.0 0.0 0.0 2.5599250742411637 0.0 12 0.0 0.0 0.0 2.870811745579185 0.0 13 0.0 0.0 0.0 3.0151634916416126 0.0 14 0.0 0.0 0.0 3.0877190560182806 0.0 15 0.0 0.0 0.0 3.177165132368457 0.0 16 0.0 0.0 0.0 3.346576507230819 0.0 17 0.0 0.0 0.0 3.5626784117856194 0.0 18 0.0 0.0 0.0 3.8065553135502634 0.0 19 0.0 0.0 0.0 3.95067694364575 0.0 20 0.0 0.0 0.0 4.115808161523 0.0 21 0.0 0.0 0.0 4.331587903724082 0.0 22 0.0 0.0 0.0 4.570931520939978 0.0 23 0.0 0.0 0.0 4.819847962380642 0.0 24 0.0 0.0 0.0 5.014203908059467 0.0 25 0.0 0.0 0.0 5.186583778895375 0.0 26 0.0 0.0 0.0 5.349759011053621 0.0 27 0.0 0.0 0.0 5.521057336844903 0.0 28 0.0 0.0 0.0 5.706898991746891 0.0 29 2.3011596694154018E-5 0.0 0.0 5.903118876757942 0.0 30 2.3011596694154018E-5 0.0 0.0 6.1467196393622565 0.0 31 2.3011596694154018E-5 0.0 0.0 6.356263238859223 0.0 32 2.3011596694154018E-5 0.0 0.0 6.560284055149593 0.0 33 2.3011596694154018E-5 0.0 0.0 6.7634534423622785 0.0 34 2.3011596694154018E-5 0.0 0.0 6.9758965030427085 0.0 35 2.3011596694154018E-5 0.0 0.0 7.210154557389196 0.0 36 2.3011596694154018E-5 0.0 0.0 7.432538627841501 0.0 37 2.3011596694154018E-5 0.0 0.0 7.661342933771474 0.0 38 6.903479008246205E-5 0.0 0.0 7.905012731165871 0.0 39 6.903479008246205E-5 0.0 0.0 8.247172162411248 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 16405 0.0 42.202072 1 CGACGGT 605 0.0 42.02479 28 CGTTAGG 650 0.0 41.538464 2 CGGTCTA 615 0.0 40.97561 31 TCGCGCG 40 3.4611912E-7 39.375 1 AAGGGAT 8705 0.0 38.79667 5 TAGGGAC 6175 0.0 38.732796 5 TAAGGGA 7900 0.0 38.477848 4 TAGGGAG 8465 0.0 38.43473 5 GGGCGAT 7385 0.0 38.205822 7 TTAGGGA 7985 0.0 38.152786 4 GACCGAT 2415 0.0 38.10559 9 TACGGGA 2430 0.0 37.87037 4 ATAGGGA 8770 0.0 37.867733 4 CGAGGGA 3930 0.0 37.55725 4 TAGGGAT 9360 0.0 37.548077 5 CTATACG 60 1.5643309E-10 37.499996 1 AGGGCGA 4075 0.0 37.435585 6 ACGGGAT 2730 0.0 37.41758 5 CACGACG 680 0.0 37.38971 26 >>END_MODULE