##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547461_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4295499 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26512193344708 31.0 31.0 33.0 30.0 34.0 2 31.685844182480313 31.0 31.0 34.0 30.0 34.0 3 31.82490718773302 31.0 31.0 34.0 30.0 34.0 4 35.568169611958936 37.0 35.0 37.0 33.0 37.0 5 35.44013512749043 37.0 35.0 37.0 33.0 37.0 6 35.480856822455316 37.0 35.0 37.0 33.0 37.0 7 35.91740098181841 37.0 35.0 37.0 35.0 37.0 8 35.95321405033501 37.0 35.0 37.0 35.0 37.0 9 37.65757435864844 39.0 37.0 39.0 35.0 39.0 10 36.988040504723664 39.0 37.0 39.0 33.0 39.0 11 36.85057079515092 39.0 37.0 39.0 32.0 39.0 12 36.53098836712568 39.0 35.0 39.0 32.0 39.0 13 36.44849178174643 39.0 35.0 39.0 32.0 39.0 14 37.509765454490854 40.0 36.0 41.0 32.0 41.0 15 37.61249344953869 40.0 36.0 41.0 32.0 41.0 16 37.633734520715755 40.0 36.0 41.0 32.0 41.0 17 37.56039426385619 39.0 36.0 41.0 32.0 41.0 18 37.45149492526945 39.0 36.0 41.0 32.0 41.0 19 37.41219262302238 39.0 36.0 41.0 32.0 41.0 20 37.310752487662086 39.0 35.0 41.0 32.0 41.0 21 37.25214928463492 39.0 35.0 41.0 32.0 41.0 22 37.17821794394551 39.0 35.0 41.0 31.0 41.0 23 37.077467367586394 39.0 35.0 41.0 31.0 41.0 24 37.01084996178558 39.0 35.0 41.0 31.0 41.0 25 36.89926478856123 39.0 35.0 41.0 31.0 41.0 26 36.760940463494464 39.0 35.0 40.0 31.0 41.0 27 36.660151707636295 38.0 35.0 40.0 30.0 41.0 28 36.53497183912742 38.0 35.0 40.0 30.0 41.0 29 36.59311013691308 38.0 35.0 40.0 30.0 41.0 30 36.537798984471884 38.0 35.0 40.0 30.0 41.0 31 36.445889522963455 38.0 35.0 40.0 30.0 41.0 32 36.43067569099655 39.0 35.0 41.0 30.0 41.0 33 36.34215815205637 39.0 35.0 41.0 30.0 41.0 34 36.21451035141668 39.0 35.0 41.0 30.0 41.0 35 36.11196394179116 39.0 35.0 41.0 29.0 41.0 36 36.061363068644646 39.0 35.0 41.0 29.0 41.0 37 36.03062531268195 39.0 35.0 41.0 29.0 41.0 38 35.921067843340204 38.0 35.0 41.0 28.0 41.0 39 35.83156601829031 38.0 35.0 41.0 28.0 41.0 40 35.756580085340495 38.0 35.0 40.0 27.0 41.0 41 35.65427346159317 38.0 35.0 40.0 27.0 41.0 42 35.60698675520586 38.0 34.0 40.0 27.0 41.0 43 35.58437331727932 38.0 34.0 40.0 27.0 41.0 44 35.46253625015394 38.0 34.0 40.0 27.0 41.0 45 35.332370930595026 38.0 34.0 40.0 26.0 41.0 46 35.28742062330826 38.0 34.0 40.0 26.0 41.0 47 35.23260277793104 38.0 34.0 40.0 26.0 41.0 48 35.149517902343824 38.0 34.0 40.0 26.0 41.0 49 35.07084997575369 38.0 34.0 40.0 26.0 41.0 50 34.97462832606875 38.0 34.0 40.0 26.0 41.0 51 34.41408250822547 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 3.0 11 8.0 12 6.0 13 6.0 14 31.0 15 91.0 16 255.0 17 651.0 18 1446.0 19 2847.0 20 5007.0 21 8225.0 22 12599.0 23 18935.0 24 28242.0 25 40517.0 26 55087.0 27 66846.0 28 76893.0 29 89382.0 30 107895.0 31 130836.0 32 158993.0 33 199008.0 34 277145.0 35 353841.0 36 357213.0 37 459086.0 38 680475.0 39 1163399.0 40 524.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.873596059503218 24.89717725461 29.46619240279185 13.763034283094932 2 30.18666748612909 26.58191749084332 29.56874160603925 13.66267341698834 3 28.836323789156975 25.90593083597505 31.408551136899344 13.849194237968627 4 25.774816848985417 28.553469573616475 30.574398923151886 15.097314654246224 5 23.427243260911016 32.56809045933895 29.32879276656798 14.675873513182053 6 22.355190863738997 41.27990717725694 25.85464459426018 10.510257364743888 7 90.33788623859533 2.6650221545855324 5.58684800066302 1.4102436061561183 8 90.2680456915483 2.289349852019521 5.43152262403041 2.011081832401777 9 83.30359290038247 6.717985500636829 7.356747143929029 2.6216744550516715 10 26.052409743315035 50.50330590229447 12.318522248521068 11.125762105869423 11 31.153563299630616 23.992649049621477 27.648149842428086 17.205637808319825 12 29.53633559220943 22.127487400183306 28.332494082759652 20.003682924847613 13 25.952398079943677 24.538825407711652 30.060325936520993 19.44845057582367 14 20.855015913168646 27.85657731499879 30.55065313715589 20.73775363467667 15 19.983568847298066 26.59283589636501 34.150584134695414 19.273011121641513 16 24.576469462570007 26.22119106534538 30.99644534895713 18.20589412312749 17 24.074967774407583 25.44493666509991 28.453597591339214 22.026497969153294 18 23.50369537974517 25.214486140027038 30.906467444178197 20.375351036049597 19 24.44880094256802 26.936218586012938 28.387412032920974 20.227568438498064 20 25.725113659670274 27.508445468151667 27.709679364376527 19.05676150780154 21 25.506256665407207 26.13626496013618 30.161036005362824 18.196442369093788 22 24.61504472472232 23.79784048372494 29.773258007975322 21.813856783577414 23 21.538335825476853 27.191136582734625 30.025242701721034 21.245284890067488 24 20.953397963775572 26.508840998449774 31.525347811744343 21.012413226030315 25 22.001867536228037 27.98089348874252 29.390950853439847 20.626288121589596 26 21.636368673348542 28.667495906761935 28.090473307059323 21.6056621128302 27 21.13200352275719 28.138989207074662 29.828082837407248 20.9009244327609 28 20.04840415514007 27.809132303371502 30.984339654135646 21.158123887352783 29 21.32250525491916 26.642911568597732 30.575353410628193 21.45922976585491 30 22.860859704541895 26.374025462466644 29.87487600392876 20.8902388290627 31 23.29158963836332 26.774747241240192 28.87743659118533 21.05622652921116 32 24.63741697995972 26.225777261268128 28.758824062117117 20.377981696655034 33 23.636485539863937 26.566668971404717 29.04409941662191 20.752746072109435 34 21.938987763703356 26.530049244569724 30.587482385632033 20.94348060609489 35 21.912099153090246 26.919293893445207 29.909796277452283 21.258810676012263 36 23.77707456106962 26.4350893807681 28.950117320478945 20.83771873768333 37 22.125834507236526 28.410645654905288 29.367717231455533 20.095802606402653 38 21.888702569829487 27.986853215423867 28.845682422461277 21.278761792285366 39 21.664840336361387 26.996886741214464 29.48632976052375 21.851943161900397 40 22.772232050339202 26.406245234837677 29.471314042908638 21.350208671914487 41 20.63546051343511 26.3620827289216 29.893989033637304 23.108467724005987 42 21.952117786548197 26.819189109344453 29.072640920181797 22.156052183925546 43 21.679343889964823 26.512612387990313 29.854552404738076 21.95349131730679 44 22.00158817403985 26.82254145560271 29.622588667812515 21.55328170254492 45 21.393742612907136 27.323321458112314 28.693336909169343 22.589599019811203 46 22.09256712665979 27.36995166335739 28.973979507386687 21.563501702596135 47 21.347671132038442 27.05250309684626 29.937732496271096 21.662093274844203 48 21.281601974531945 27.053946468151896 30.195467395057012 21.468984162259147 49 21.94217714868517 26.404848423896738 30.065005253173148 21.587969174244947 50 21.17381473025602 27.371557995939472 29.909935958546374 21.544691315258135 51 20.778191311416904 26.81581348290385 29.340409577560138 23.06558562811911 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1939.0 1 3431.0 2 4923.0 3 21643.0 4 38363.0 5 26474.0 6 14585.0 7 14885.5 8 15186.0 9 15900.5 10 16615.0 11 17121.5 12 17628.0 13 17704.5 14 17781.0 15 17336.5 16 16892.0 17 16670.0 18 16448.0 19 16475.0 20 16502.0 21 17772.5 22 19043.0 23 21778.0 24 24513.0 25 30618.0 26 43257.5 27 49792.0 28 59627.0 29 69462.0 30 78948.0 31 88434.0 32 101243.5 33 114053.0 34 130247.5 35 146442.0 36 155982.5 37 165523.0 38 182250.0 39 198977.0 40 214905.0 41 230833.0 42 255802.0 43 280771.0 44 295229.5 45 309688.0 46 328628.5 47 347569.0 48 359777.5 49 371986.0 50 357168.5 51 342351.0 52 318421.0 53 294491.0 54 271019.5 55 247548.0 56 228882.0 57 210216.0 58 189730.5 59 169245.0 60 148985.0 61 128725.0 62 111443.5 63 94162.0 64 79622.5 65 65083.0 66 54279.5 67 43476.0 68 35142.0 69 26808.0 70 22335.0 71 17862.0 72 14357.5 73 10853.0 74 8573.0 75 5048.5 76 3804.0 77 3033.0 78 2262.0 79 1554.0 80 846.0 81 659.5 82 473.0 83 319.0 84 165.0 85 156.5 86 148.0 87 79.0 88 10.0 89 6.0 90 2.0 91 1.5 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4295499.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.69488223708441 #Duplication Level Percentage of deduplicated Percentage of total 1 77.11835862644627 14.417186328386556 2 8.737515478761946 3.266936458403135 3 2.9268630373459255 1.6415207942177177 4 1.434601097783914 1.0727879432104914 5 0.8756622502522401 0.8185201323962981 6 0.6394498216119068 0.7172663466935537 7 0.46174637371510907 0.6042605856003312 8 0.35853654143877184 0.5362238735911499 9 0.2917094798122884 0.49081269352786955 >10 3.998934641256649 18.70226758414119 >50 1.989127810451679 27.04107138752041 >100 1.1627348126763108 29.255555908374177 >500 0.0031315976625553798 0.39946321721348566 >1k 0.001503166878026537 0.4754310139446592 >5k 0.0 0.0 >10k+ 1.2526390650221143E-4 0.5606957327788875 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23943 0.5573974059824016 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.312072939604922E-5 0.0 0.0 0.09204984100799465 0.0 2 9.312072939604922E-5 0.0 0.0 0.2405075638476461 0.0 3 9.312072939604922E-5 0.0 0.0 0.3561867899398882 0.0 4 9.312072939604922E-5 0.0 0.0 0.5502969503659528 0.0 5 9.312072939604922E-5 0.0 0.0 0.8775464736460188 0.0 6 9.312072939604922E-5 0.0 0.0 1.3311608267165236 0.0 7 9.312072939604922E-5 0.0 0.0 1.5645679349477208 0.0 8 9.312072939604922E-5 0.0 0.0 2.232476366540884 0.0 9 9.312072939604922E-5 0.0 0.0 2.5022238394188894 0.0 10 9.312072939604922E-5 0.0 0.0 2.9686422927813507 0.0 11 9.312072939604922E-5 0.0 0.0 3.4258417939336034 0.0 12 9.312072939604922E-5 0.0 0.0 3.833733868870648 0.0 13 9.312072939604922E-5 0.0 0.0 4.030521250266849 0.0 14 9.312072939604922E-5 0.0 0.0 4.1342111824493495 0.0 15 9.312072939604922E-5 0.0 0.0 4.256082937046429 0.0 16 9.312072939604922E-5 0.0 0.0 4.462345352658678 0.0 17 9.312072939604922E-5 0.0 0.0 4.707485672793778 0.0 18 9.312072939604922E-5 0.0 0.0 4.977116744760038 0.0 19 9.312072939604922E-5 0.0 0.0 5.15101970690716 0.0 20 9.312072939604922E-5 0.0 0.0 5.353138250061285 0.0 21 9.312072939604922E-5 0.0 0.0 5.588012009780471 0.0 22 9.312072939604922E-5 0.0 0.0 5.84942517737753 0.0 23 9.312072939604922E-5 0.0 0.0 6.111397069350965 0.0 24 9.312072939604922E-5 0.0 0.0 6.311955840287705 0.0 25 9.312072939604922E-5 0.0 0.0 6.495659759203762 0.0 26 9.312072939604922E-5 0.0 0.0 6.674172197455988 0.0 27 9.312072939604922E-5 0.0 0.0 6.863952243965136 0.0 28 9.312072939604922E-5 0.0 0.0 7.054221174303614 0.0 29 9.312072939604922E-5 0.0 0.0 7.265698350762042 0.0 30 9.312072939604922E-5 0.0 0.0 7.525668147053462 0.0 31 9.312072939604922E-5 0.0 0.0 7.757445642520229 0.0 32 9.312072939604922E-5 0.0 0.0 7.977001042253764 0.0 33 9.312072939604922E-5 0.0 0.0 8.190503594576555 0.0 34 9.312072939604922E-5 0.0 0.0 8.41429598749761 0.0 35 9.312072939604922E-5 0.0 0.0 8.647307332628875 0.0 36 9.312072939604922E-5 0.0 0.0 8.86993571643248 0.0 37 9.312072939604922E-5 0.0 0.0 9.103179863387235 0.0 38 9.312072939604922E-5 0.0 0.0 9.359308429591067 0.0 39 9.312072939604922E-5 0.0 0.0 9.728532121646403 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12895 0.0 40.32377 1 TACGGGA 2715 0.0 38.95027 4 CGACGGT 880 0.0 38.607956 28 GGGCGAT 7115 0.0 38.32748 7 ATAGGGA 9540 0.0 37.735847 4 TAGGGAC 6285 0.0 37.696896 5 CGTTAGG 645 0.0 37.67442 2 TAAGGGA 8095 0.0 37.46757 4 TTAGGGA 9295 0.0 37.350727 4 TAGGGAT 9520 0.0 37.153362 5 AGGGCGA 3680 0.0 37.051632 6 ACGGGAC 2320 0.0 37.047413 5 TAGGGAG 9630 0.0 36.98598 5 CGTAAGG 685 0.0 36.788322 2 AAGGGAT 9085 0.0 36.777657 5 AGGGATC 7240 0.0 36.453728 6 GACCGAT 2790 0.0 36.451614 9 TATGGGA 7610 0.0 36.307487 4 AGGGATG 11015 0.0 36.134815 6 GGACCGA 3210 0.0 36.09813 8 >>END_MODULE