##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547457_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 488410 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02667226305768 33.0 31.0 33.0 31.0 34.0 2 32.526473659425484 33.0 31.0 34.0 31.0 34.0 3 32.642361950001025 34.0 31.0 34.0 31.0 34.0 4 36.24865993734772 37.0 35.0 37.0 35.0 37.0 5 36.21991154972257 37.0 37.0 37.0 35.0 37.0 6 36.26446837697836 37.0 37.0 37.0 35.0 37.0 7 36.3610880203108 37.0 37.0 37.0 35.0 37.0 8 36.37137855490264 37.0 37.0 37.0 35.0 37.0 9 38.20463954464487 39.0 39.0 39.0 37.0 39.0 10 37.9134006265228 39.0 38.0 39.0 35.0 39.0 11 37.80533568108761 39.0 38.0 39.0 35.0 39.0 12 37.52348232018181 39.0 37.0 39.0 35.0 39.0 13 37.429184496631926 39.0 37.0 39.0 35.0 39.0 14 38.815796154869886 40.0 38.0 41.0 35.0 41.0 15 38.86839950041973 40.0 38.0 41.0 35.0 41.0 16 38.87450502651461 40.0 38.0 41.0 35.0 41.0 17 38.84041891034172 40.0 38.0 41.0 35.0 41.0 18 38.69112835527528 40.0 38.0 41.0 35.0 41.0 19 38.58950062447534 40.0 37.0 41.0 35.0 41.0 20 38.44572387952745 40.0 36.0 41.0 35.0 41.0 21 38.41259802215352 40.0 36.0 41.0 35.0 41.0 22 38.32929505947872 40.0 36.0 41.0 35.0 41.0 23 38.22736839950042 40.0 36.0 41.0 34.0 41.0 24 38.154939497553286 40.0 36.0 41.0 34.0 41.0 25 38.02741139616306 40.0 35.0 41.0 34.0 41.0 26 37.95174341229705 40.0 35.0 41.0 34.0 41.0 27 37.88258839909093 40.0 35.0 41.0 34.0 41.0 28 37.79179787473639 40.0 35.0 41.0 34.0 41.0 29 37.808535861264104 40.0 35.0 41.0 34.0 41.0 30 37.71990335988207 40.0 35.0 41.0 34.0 41.0 31 37.59175487807375 40.0 35.0 41.0 34.0 41.0 32 37.4546856124977 40.0 35.0 41.0 33.0 41.0 33 37.30953706926557 40.0 35.0 41.0 33.0 41.0 34 37.14878892733564 40.0 35.0 41.0 33.0 41.0 35 36.97456645031838 40.0 35.0 41.0 33.0 41.0 36 36.893153293339616 40.0 35.0 41.0 32.0 41.0 37 36.827763559304685 40.0 35.0 41.0 32.0 41.0 38 36.6943387727524 40.0 35.0 41.0 31.0 41.0 39 36.5607215249483 40.0 35.0 41.0 31.0 41.0 40 36.42292745848775 40.0 35.0 41.0 30.0 41.0 41 36.32051759791978 40.0 35.0 41.0 30.0 41.0 42 36.23896930857271 40.0 35.0 41.0 30.0 41.0 43 36.17000470915829 40.0 35.0 41.0 30.0 41.0 44 36.02516533240515 39.0 35.0 41.0 29.0 41.0 45 35.81334944001966 39.0 35.0 41.0 27.0 41.0 46 35.804131774533694 39.0 35.0 41.0 28.0 41.0 47 35.80670747937184 39.0 35.0 41.0 28.0 41.0 48 35.72897360823898 39.0 35.0 41.0 28.0 41.0 49 35.63897545095309 39.0 35.0 41.0 27.0 41.0 50 35.53564628078868 39.0 35.0 41.0 27.0 41.0 51 35.04099424663705 38.0 35.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 1.0 14 4.0 15 12.0 16 23.0 17 24.0 18 75.0 19 158.0 20 311.0 21 520.0 22 933.0 23 1526.0 24 2711.0 25 4286.0 26 5631.0 27 6148.0 28 6175.0 29 6449.0 30 7018.0 31 7603.0 32 9260.0 33 12352.0 34 23693.0 35 45715.0 36 33581.0 37 42126.0 38 76203.0 39 195710.0 40 161.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.503654716324398 25.45525275895252 29.76106140332917 13.280031121393913 2 31.738088900718658 27.89050183247681 27.558403800085994 12.813005466718536 3 28.970741794803544 25.784484347167343 32.08861407424091 13.15615978378821 4 25.52834708544051 28.943510575131548 30.768002293155337 14.7601400462726 5 23.477815769537887 33.29682029442477 29.71888372473946 13.506480211297886 6 21.26573984971643 42.146557195798614 26.839950041972934 9.747752912512029 7 85.82604778771935 4.663909420364038 7.787514588153396 1.7225282037632315 8 84.37071313036178 5.340390245899961 7.541000389017424 2.747896234720829 9 78.39888618169161 9.251858070064085 9.474212239716632 2.8750435085276713 10 32.58778485288999 37.080117114719194 17.807989189410538 12.524108842980283 11 31.795213038226077 27.673675805163693 24.753997665895458 15.777113490714767 12 27.706844659200264 25.840584754611907 28.573944022440163 17.87862656374767 13 22.171740955344895 31.97579902131406 28.465019143752173 17.38744087958887 14 18.372678692082474 33.81585143629328 29.350136156098362 18.46133371552589 15 17.71667246780369 31.290309371224996 34.80620789910117 16.18681026187015 16 19.52621772690977 28.91464138735898 34.286767265207516 17.27237362052374 17 19.807129256157737 30.227882311991973 28.064535943162504 21.900452488687783 18 19.74038205605946 30.561823058495936 31.1334739255953 18.564320959849308 19 22.958784627669377 31.07245961384902 27.98161380807109 17.987141950410514 20 23.257304313998482 30.096025879895986 29.403165373354355 17.243504432751173 21 21.71761429946152 31.77371470690608 29.720931184865172 16.787739808767224 22 22.217604062160888 28.558178579472166 28.020925042484794 21.20329231588215 23 19.10935484531439 32.70919923834483 28.659118363669865 19.522327552670912 24 18.32149218893962 30.632050940807925 33.148379435310495 17.898077434941957 25 18.223623594930487 32.08963780430376 30.94858827624332 18.73815032452243 26 17.80307528510882 35.16512765913884 28.241027005999058 18.79077004975328 27 17.949878176122517 35.358203148993674 28.85014639339899 17.84177228148482 28 16.963616633566062 33.91208206220184 31.801560164615793 17.32274113961631 29 17.437603652668866 30.58823529411765 31.374664728404415 20.599496324809074 30 18.45723879527446 34.76976310886346 28.82004872955099 17.952949366311092 31 21.579820233000962 32.511824082226 27.29305296779345 18.61530271697959 32 21.1019430396593 32.363792715136874 28.52234802727217 18.011916217931656 33 21.38572101308327 31.874654491103787 26.691713928871234 20.04791056694171 34 18.893143056038983 32.276570913781455 28.216457484490487 20.613828545689074 35 19.732601707581747 30.900882455314182 28.647652586965872 20.718863250138202 36 22.28598923035974 32.39143342683401 26.92962879547921 18.39294854732704 37 18.377183104359045 35.211195511967404 27.824983108453967 18.58663827521959 38 19.548944534305193 33.592268790565306 26.93843287401978 19.920353801109727 39 19.58170389631662 32.12239716631519 29.017219139657257 19.27867979771094 40 21.42380377142155 31.767777072541513 27.17020536025061 19.638213795786328 41 18.466657111852747 30.152535779365696 29.18982002825495 22.190987080526607 42 19.383305010134926 30.474396511127942 27.652586965868842 22.489711512868286 43 20.04647734485371 29.960279273561145 28.837656886632136 21.15558649495301 44 18.48856493519789 32.332876067238594 28.514362932781882 20.66419606478164 45 19.25718146639094 33.87338506582584 26.307405663274707 20.562027804508507 46 20.325750906001105 33.42151061608075 26.728158719108947 19.524579758809196 47 20.56120882045822 30.57840748551422 28.24737413238877 20.613009561638787 48 19.53809299563891 31.12364611699187 29.895579533588585 19.442681353780635 49 19.88309002682173 29.84357404639545 30.051800741180568 20.22153518560226 50 18.514772424807028 32.186277922237466 29.71724575663889 19.58170389631662 51 18.668536680248152 30.915214676194182 28.334186441719044 22.08206220183862 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 720.0 1 941.0 2 1162.0 3 4357.5 4 7553.0 5 5065.0 6 2577.0 7 2803.5 8 3030.0 9 3602.5 10 4175.0 11 4744.5 12 5314.0 13 5527.5 14 5741.0 15 5736.5 16 5732.0 17 5344.0 18 4956.0 19 4801.0 20 4646.0 21 4570.5 22 4495.0 23 4557.5 24 4620.0 25 4943.5 26 6682.5 27 8098.0 28 8861.5 29 9625.0 30 10501.0 31 11377.0 32 12818.5 33 14260.0 34 16529.5 35 18799.0 36 19715.0 37 20631.0 38 22747.5 39 24864.0 40 27437.0 41 30010.0 42 32358.0 43 34706.0 44 35655.0 45 36604.0 46 37365.5 47 38127.0 48 39243.5 49 40360.0 50 37696.5 51 35033.0 52 30702.5 53 26372.0 54 23743.5 55 21115.0 56 18680.5 57 16246.0 58 14928.0 59 13610.0 60 11794.5 61 9979.0 62 8747.5 63 7516.0 64 6118.0 65 4720.0 66 3655.0 67 2590.0 68 2013.0 69 1436.0 70 1182.0 71 928.0 72 693.0 73 458.0 74 470.5 75 388.0 76 293.0 77 213.5 78 134.0 79 82.5 80 31.0 81 19.0 82 7.0 83 6.0 84 5.0 85 3.0 86 1.0 87 1.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 488410.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.297816635530985 #Duplication Level Percentage of deduplicated Percentage of total 1 75.38885521865721 19.071734356841834 2 7.432482377122765 3.7605115264653435 3 2.9754354478530516 2.2581606111193655 4 1.8127740436950768 1.8343690143619233 5 1.1619936879034092 1.4697951624112433 6 0.8815231974061548 1.3380367324768734 7 0.6651082034185933 1.1778049761009712 8 0.5707688997616197 1.1551365573946577 9 0.4935237538953013 1.1236566088190028 >10 7.443488540141809 44.928450603074346 >50 1.1114416505597202 17.732662616278258 >100 0.05853972117066559 2.568380152523014 >500 0.0032522067317036435 0.46813752119343155 >1k 0.0 0.0 >5k 8.130516829259109E-4 1.1131635609397414 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5412 1.1080854200364447 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 669 0.13697508241027007 No Hit GGTAATGGGGAAAAGAAAGAAGGAGGGAAAAGAAGGAGGAAAAAGAAAGAA 546 0.11179132286398723 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 536 0.10974386273827318 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 525 0.10749165659998772 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06265227984684998 0.0 2 0.0 0.0 0.0 0.21703077332568949 0.0 3 0.0 0.0 0.0 0.3396736348559612 0.0 4 0.0 0.0 0.0 0.6373743371347843 0.0 5 0.0 0.0 0.0 1.0079646198890277 0.0 6 0.0 0.0 0.0 1.4592248315964047 0.0 7 0.0 0.0 0.0 1.6799410331483795 0.0 8 0.0 0.0 0.0 2.2272271247517454 0.0 9 0.0 0.0 0.0 2.456952150856862 0.0 10 0.0 0.0 0.0 2.879957412829385 0.0 11 0.0 0.0 0.0 3.4456706455641775 0.0 12 0.0 0.0 0.0 3.8694948915869865 0.0 13 0.0 0.0 0.0 4.041686288159538 0.0 14 0.0 0.0 0.0 4.118056550848673 0.0 15 0.0 0.0 0.0 4.222886509285232 0.0 16 0.0 0.0 0.0 4.440736266661207 0.0 17 0.0 0.0 0.0 4.702401670727463 0.0 18 0.0 0.0 0.0 5.027743084703426 0.0 19 0.0 0.0 0.0 5.211809750005119 0.0 20 0.0 0.0 0.0 5.395057431256526 0.0 21 0.0 0.0 0.0 5.619459061034786 0.0 22 0.0 0.0 0.0 5.840584754611904 0.0 23 0.0 0.0 0.0 6.08914641387359 0.0 24 0.0 0.0 0.0 6.273213079175283 0.0 25 0.0 0.0 0.0 6.440900063471264 0.0 26 0.0 0.0 0.0 6.592821604799247 0.0 27 0.0 0.0 0.0 6.747609590303229 0.0 28 0.0 0.0 0.0 6.895436211379783 0.0 29 0.0 0.0 0.0 7.064351671751193 0.0 30 0.0 0.0 0.0 7.261726827870027 0.0 31 0.0 0.0 0.0 7.454802317724862 0.0 32 0.0 0.0 0.0 7.639278475051698 0.0 33 0.0 0.0 0.0 7.835220409082533 0.0 34 0.0 0.0 0.0 8.027886406912225 0.0 35 0.0 0.0 0.0 8.228946991257345 0.0 36 0.0 0.0 0.0 8.42632214737618 0.0 37 0.0 0.0 0.0 8.629225445834443 0.0 38 0.0 0.0 0.0 8.852193853524703 0.0 39 0.0 0.0 0.0 9.062263262422965 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 25 3.8874994E-5 45.0 6 TTAGGCG 25 3.8874994E-5 45.0 1 AACCGCA 20 7.0292986E-4 45.0 15 CGGCATA 20 7.0292986E-4 45.0 33 GACGTCG 40 6.8012014E-9 45.0 19 CGTTGCA 20 7.0292986E-4 45.0 18 GACAACG 20 7.0292986E-4 45.0 1 TAGCGAG 50 2.1827873E-11 45.0 1 TCTTACG 20 7.0292986E-4 45.0 32 TGAGTCG 20 7.0292986E-4 45.0 1 CGCGACC 25 3.8874994E-5 45.0 10 TAACGAG 20 7.0292986E-4 45.0 1 TGCGGAT 20 7.0292986E-4 45.0 4 CGTAGGT 20 7.0292986E-4 45.0 3 TACGAAT 45 3.8380676E-10 45.0 12 TGCGACC 20 7.0292986E-4 45.0 43 TCGTCCC 70 0.0 45.0 38 CGAATAT 45 3.8380676E-10 45.0 14 TCCGTTG 20 7.0292986E-4 45.0 16 AGCGACG 40 6.8012014E-9 45.0 16 >>END_MODULE