##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547456_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3953499 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34257147908726 31.0 31.0 33.0 30.0 34.0 2 31.766493174780113 31.0 31.0 34.0 30.0 34.0 3 31.87617601522095 31.0 31.0 34.0 30.0 34.0 4 35.65470688117033 37.0 35.0 37.0 33.0 37.0 5 35.55125725338491 37.0 35.0 37.0 33.0 37.0 6 35.59757318770031 37.0 35.0 37.0 33.0 37.0 7 35.95147437750711 37.0 35.0 37.0 35.0 37.0 8 35.977395213708164 37.0 35.0 37.0 35.0 37.0 9 37.72263860443622 39.0 37.0 39.0 35.0 39.0 10 37.111674999791326 39.0 37.0 39.0 33.0 39.0 11 36.945354482194126 39.0 37.0 39.0 33.0 39.0 12 36.65843016527891 39.0 35.0 39.0 32.0 39.0 13 36.60581778318396 39.0 35.0 39.0 32.0 39.0 14 37.7628298375692 40.0 36.0 41.0 32.0 41.0 15 37.82847826697313 40.0 36.0 41.0 33.0 41.0 16 37.83409911068651 40.0 36.0 41.0 33.0 41.0 17 37.75332079254352 40.0 36.0 41.0 32.0 41.0 18 37.61018050086771 39.0 36.0 41.0 32.0 41.0 19 37.527051100809686 39.0 36.0 41.0 32.0 41.0 20 37.39898833919017 39.0 35.0 41.0 32.0 41.0 21 37.33633826643184 39.0 35.0 41.0 32.0 41.0 22 37.25315600181004 39.0 35.0 41.0 32.0 41.0 23 37.15347569330358 39.0 35.0 41.0 32.0 41.0 24 37.07932138088311 39.0 35.0 41.0 31.0 41.0 25 36.97949057278122 39.0 35.0 41.0 31.0 41.0 26 36.83727604332264 39.0 35.0 41.0 31.0 41.0 27 36.75391343212683 39.0 35.0 41.0 31.0 41.0 28 36.63500914000484 38.0 35.0 40.0 30.0 41.0 29 36.65425563532456 39.0 35.0 40.0 30.0 41.0 30 36.59545379928008 39.0 35.0 40.0 30.0 41.0 31 36.48685430298578 39.0 35.0 41.0 30.0 41.0 32 36.37310923817105 39.0 35.0 41.0 30.0 41.0 33 36.2276117940083 39.0 35.0 41.0 30.0 41.0 34 36.041857605123965 39.0 35.0 41.0 29.0 41.0 35 35.88131096024053 39.0 35.0 41.0 27.0 41.0 36 35.81880961649415 39.0 35.0 41.0 27.0 41.0 37 35.77662647695118 39.0 35.0 41.0 27.0 41.0 38 35.654417011361325 39.0 35.0 41.0 27.0 41.0 39 35.55811421730472 38.0 35.0 41.0 26.0 41.0 40 35.455778033584934 38.0 35.0 41.0 25.0 41.0 41 35.34276219622163 38.0 34.0 41.0 25.0 41.0 42 35.29937202462932 38.0 34.0 41.0 25.0 41.0 43 35.268337996291386 38.0 34.0 40.0 25.0 41.0 44 35.1432207267537 38.0 34.0 40.0 24.0 41.0 45 35.02145744819968 38.0 34.0 40.0 24.0 41.0 46 34.98478866442106 38.0 34.0 40.0 24.0 41.0 47 34.94482280127047 38.0 34.0 40.0 24.0 41.0 48 34.86258071647419 38.0 34.0 40.0 24.0 41.0 49 34.78323480036292 38.0 34.0 40.0 24.0 41.0 50 34.693172554236135 38.0 34.0 40.0 24.0 41.0 51 34.151039876322216 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 1.0 10 1.0 11 1.0 12 4.0 13 11.0 14 40.0 15 94.0 16 272.0 17 642.0 18 1464.0 19 2933.0 20 5208.0 21 8501.0 22 13050.0 23 19717.0 24 29765.0 25 44669.0 26 61000.0 27 70825.0 28 75710.0 29 82417.0 30 94592.0 31 112713.0 32 136885.0 33 170962.0 34 245289.0 35 317172.0 36 318669.0 37 407677.0 38 616582.0 39 1116004.0 40 627.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.906546833577046 24.578050987239404 27.238656187847777 15.276745991335778 2 32.44723218596995 25.661673368325122 28.80504080056679 13.086053645138144 3 28.146409041712168 25.890331577167462 32.85605991047424 13.107199470646128 4 24.91957124562318 28.778279696036346 32.00387808369244 14.298270974648029 5 23.06521387763093 32.228514538640326 30.926983919813818 13.779287663914927 6 22.21318381514704 40.78478330208253 27.290964282525426 9.711068600245 7 88.99875780922166 2.5213614572812593 7.415987711138918 1.0638930223581693 8 89.08055876579203 2.2959914748935057 7.322652667927828 1.3007970913866427 9 82.61671496565447 6.445707966537996 8.803366334479913 2.134210733327617 10 27.28701841077992 48.17084815248467 14.037312264401736 10.504821172333672 11 29.666252603073882 24.20094200099709 29.67907668624679 16.453728709682235 12 28.57152613419151 22.792139317601954 29.74385474740224 18.892479800804303 13 24.841184985755657 25.11261543255734 31.263268309919894 18.78293127176711 14 21.149214910639916 27.31911655978666 31.360549224876493 20.171119304696926 15 19.933633472526488 26.560927421506875 34.26228260080501 19.24315650516163 16 23.9742061399282 26.143322661773787 32.30679962230925 17.575671575988764 17 23.338642554355015 25.83830171703597 30.342008433542034 20.48104729506698 18 23.128600766055587 24.96209054308601 32.38564117507049 19.523667515787913 19 24.3670733191029 26.77577507923993 29.572487561018733 19.284664040638432 20 25.57580006976099 26.567478580366405 30.008658153195434 17.84806319667717 21 25.26842677840566 25.438605144455583 31.381366227739022 17.911601849399734 22 24.412627902523816 24.064025310237845 31.13429395075097 20.389052836487377 23 21.40835244931136 26.78978798274642 31.547649310142738 20.254210257799485 24 20.75475420633722 26.29053403074087 33.061928180581305 19.892783582340606 25 21.35149142569658 28.00911294020815 31.021128372613727 19.618267261481538 26 21.516307453220552 28.70424401270874 29.882263787090878 19.897184746979825 27 20.26774257436261 27.965809527206154 31.410429090787677 20.356018807643558 28 19.763682752923422 27.712894324748788 32.486387374829235 20.037035547498558 29 20.452085608216926 26.111072748469137 32.43324457651311 21.00359706680083 30 21.297260983245476 27.12020415333354 31.662231355060417 19.92030350836057 31 22.436757920009594 27.172664012309095 30.304573240058996 20.086004827622318 32 22.5433723392873 27.480644360856044 30.14911601090578 19.826867288950876 33 22.750252371380387 27.253023208049378 29.55898053850526 20.437743882064975 34 21.049379296668597 27.907102037966876 30.598211862453994 20.445306802910533 35 21.382400754369737 27.882541515756042 30.423859978211702 20.311197751662515 36 22.853477388004904 28.205445353596904 28.634230083275597 20.306847175122595 37 21.30330626111199 29.79725048621487 28.483856958102177 20.41558629457096 38 21.279276913943825 29.027046674351 29.555667018001014 20.13800939370416 39 21.31332270477367 28.689598757960987 28.80071551807652 21.196363019188823 40 22.887371414536844 27.722151946920942 29.38171983855314 20.008756799989072 41 20.67603912382424 27.441135055301647 29.76305293108712 22.119772889786997 42 21.4784169668438 27.647939205245788 29.039061347935082 21.834582479975335 43 21.298829214323817 27.49926078139896 29.60982157830317 21.592088425974055 44 21.139805524169855 28.268326361028546 29.358373430725543 21.233494684076053 45 20.621833975422785 28.477508151639853 28.82765368095452 22.073004191982847 46 21.226209997776653 28.80253668965137 28.9008799546933 21.07037335787868 47 20.6548680042666 28.266075190609634 30.11304669610388 20.966010109019884 48 21.115067943611468 27.804433490434675 30.70409275429183 20.376405811662025 49 21.321062683966787 27.469641449257985 30.03043632994469 21.178859536830537 50 20.55649944517502 28.478899324370637 30.33168846128455 20.632912769169792 51 20.18348809497612 28.10338386325632 29.835646853584635 21.877481188182923 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1934.0 1 3366.0 2 4798.0 3 30078.5 4 55359.0 5 39090.5 6 22822.0 7 22462.0 8 22102.0 9 22736.5 10 23371.0 11 23534.0 12 23697.0 13 23574.5 14 23452.0 15 22666.0 16 21880.0 17 21107.0 18 20334.0 19 20576.0 20 20818.0 21 21610.5 22 22403.0 23 23964.0 24 25525.0 25 30802.0 26 43570.0 27 51061.0 28 60420.0 29 69779.0 30 80238.0 31 90697.0 32 105893.0 33 121089.0 34 137414.5 35 153740.0 36 165408.5 37 177077.0 38 185182.0 39 193287.0 40 210017.5 41 226748.0 42 243072.0 43 259396.0 44 264815.0 45 270234.0 46 281403.0 47 292572.0 48 292296.5 49 292021.0 50 283048.0 51 274075.0 52 256760.0 53 239445.0 54 223799.0 55 208153.0 56 193419.5 57 178686.0 58 162104.5 59 145523.0 60 128519.5 61 111516.0 62 99772.0 63 88028.0 64 76710.0 65 65392.0 66 53984.5 67 42577.0 68 35526.5 69 28476.0 70 23640.5 71 18805.0 72 15625.5 73 12446.0 74 10147.5 75 6388.5 76 4928.0 77 3736.0 78 2544.0 79 1976.5 80 1409.0 81 1145.5 82 882.0 83 592.5 84 303.0 85 205.5 86 108.0 87 70.5 88 33.0 89 28.5 90 24.0 91 18.5 92 13.0 93 10.5 94 8.0 95 4.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3953499.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.92387583995797 #Duplication Level Percentage of deduplicated Percentage of total 1 77.6875571373711 13.9246212843988 2 6.783323579754243 2.4316689925154855 3 2.372352794730131 1.2756527082396047 4 1.3052381961280712 0.9357970947588102 5 0.8534360355318907 0.7648440769109782 6 0.6323075804828501 0.68000415391433 7 0.4845744227097025 0.6079816251507612 8 0.4328233953809561 0.6206298239549836 9 0.355655221982734 0.5737248036586092 >10 5.706140471180107 26.461546625187005 >50 2.652175934504041 33.967476247188806 >100 0.7308351586499686 16.354863548005643 >500 0.0025776515478136645 0.3091137446617904 >1k 8.592171826045482E-4 0.23660304727164064 >5k 0.0 0.0 >10k+ 1.4320286376742473E-4 0.8554722241827413 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33329 0.8430253808082411 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.0588099301403645E-5 0.0 0.0 0.029518155942369024 0.0 2 5.0588099301403645E-5 0.0 0.0 0.07565450250524915 0.0 3 5.0588099301403645E-5 0.0 0.0 0.12201849551498559 0.0 4 5.0588099301403645E-5 0.0 0.0 0.1989124064531191 0.0 5 5.0588099301403645E-5 0.0 0.0 0.32558500710383387 0.0 6 5.0588099301403645E-5 0.0 0.0 0.5840649004843558 0.0 7 5.0588099301403645E-5 0.0 0.0 0.7019857599559276 0.0 8 5.0588099301403645E-5 0.0 0.0 0.9945873263152463 0.0 9 5.0588099301403645E-5 0.0 0.0 1.1338563636920105 0.0 10 5.0588099301403645E-5 0.0 0.0 1.3722780756995259 0.0 11 5.0588099301403645E-5 0.0 0.0 1.6082715589405738 0.0 12 5.0588099301403645E-5 0.0 0.0 1.8079680809328649 0.0 13 5.0588099301403645E-5 0.0 0.0 1.9173648456721502 0.0 14 5.0588099301403645E-5 0.0 0.0 1.9780705648338346 0.0 15 5.0588099301403645E-5 0.0 0.0 2.045125090457845 0.0 16 5.0588099301403645E-5 0.0 0.0 2.1555083231335077 0.0 17 5.0588099301403645E-5 0.0 0.0 2.2753009422792316 0.0 18 5.0588099301403645E-5 0.0 0.0 2.407614116002053 0.0 19 5.0588099301403645E-5 0.0 0.0 2.4944738825025627 0.0 20 5.0588099301403645E-5 0.0 0.0 2.5951189060627056 0.0 21 5.0588099301403645E-5 0.0 0.0 2.714000939421004 0.0 22 5.0588099301403645E-5 0.0 0.0 2.8502093967900333 0.0 23 5.0588099301403645E-5 0.0 0.0 2.99640900377109 0.0 24 5.0588099301403645E-5 0.0 0.0 3.112356927369907 0.0 25 5.0588099301403645E-5 0.0 0.0 3.2148231225049 0.0 26 5.0588099301403645E-5 0.0 0.0 3.316606378299324 0.0 27 5.0588099301403645E-5 0.0 0.0 3.427419609819049 0.0 28 5.0588099301403645E-5 0.0 0.0 3.5408634225024467 0.0 29 5.0588099301403645E-5 0.0 0.0 3.666625437365736 0.0 30 5.0588099301403645E-5 0.0 0.0 3.8161132708013836 0.0 31 5.0588099301403645E-5 0.0 0.0 3.947338800389225 0.0 32 5.0588099301403645E-5 0.0 0.0 4.0789184466721755 0.0 33 7.588214895210547E-5 0.0 0.0 4.21062456320338 0.0 34 7.588214895210547E-5 0.0 0.0 4.349868306530493 0.0 35 7.588214895210547E-5 0.0 0.0 4.500469078150772 0.0 36 7.588214895210547E-5 0.0 0.0 4.646112216039513 0.0 37 7.588214895210547E-5 0.0 0.0 4.7953724030283045 0.0 38 7.588214895210547E-5 0.0 0.0 4.960871369892847 0.0 39 7.588214895210547E-5 0.0 0.0 5.1911736919624865 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 20930 0.0 41.860966 1 CGTTAGG 650 0.0 39.807693 2 TACGGGA 2705 0.0 39.260628 4 TTAGGGA 7610 0.0 38.524967 4 AGGGCGA 3560 0.0 38.426968 6 TAGGGCG 1520 0.0 38.19079 5 TAGGGAT 9060 0.0 38.120857 5 GGGCGAT 6975 0.0 37.903225 7 ATAGGGA 8140 0.0 37.86855 4 TAAGGGA 7905 0.0 37.400383 4 AGGGATT 8395 0.0 37.388325 6 AAGGGAC 5945 0.0 37.27923 5 TCACGAC 510 0.0 37.058823 25 TAGGGAC 5490 0.0 37.008198 5 GACCGAT 2585 0.0 36.992264 9 CGGTCTA 505 0.0 36.980194 31 TGGGCGA 1775 0.0 36.887325 6 GGACCGA 2730 0.0 36.758244 8 TATGGGA 7060 0.0 36.713882 4 AAGGGAT 8965 0.0 36.44172 5 >>END_MODULE