##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547455_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4844969 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265729460807695 31.0 31.0 33.0 30.0 34.0 2 31.678915386249116 31.0 31.0 34.0 30.0 34.0 3 31.82693057478799 31.0 31.0 34.0 30.0 34.0 4 35.576322366562096 37.0 35.0 37.0 33.0 37.0 5 35.44198838011141 37.0 35.0 37.0 33.0 37.0 6 35.48869002051406 37.0 35.0 37.0 33.0 37.0 7 35.91157817521639 37.0 35.0 37.0 35.0 37.0 8 35.94245659776151 37.0 35.0 37.0 35.0 37.0 9 37.66973410975385 39.0 37.0 39.0 35.0 39.0 10 36.98385686265485 39.0 37.0 39.0 33.0 39.0 11 36.79412128333535 39.0 37.0 39.0 32.0 39.0 12 36.40771096781011 39.0 35.0 39.0 32.0 39.0 13 36.29537588372598 39.0 35.0 39.0 32.0 39.0 14 37.34386164287119 39.0 36.0 41.0 32.0 41.0 15 37.46425931724228 39.0 36.0 41.0 32.0 41.0 16 37.51137024818941 39.0 36.0 41.0 32.0 41.0 17 37.44521254934758 39.0 36.0 41.0 32.0 41.0 18 37.355541387364916 39.0 36.0 41.0 32.0 41.0 19 37.29375461432261 39.0 36.0 41.0 32.0 41.0 20 37.179223644155414 39.0 35.0 41.0 31.0 41.0 21 37.11647669985092 39.0 35.0 41.0 31.0 41.0 22 37.06361175891941 39.0 35.0 41.0 31.0 41.0 23 36.96758348711829 39.0 35.0 41.0 31.0 41.0 24 36.88938608275925 39.0 35.0 41.0 31.0 41.0 25 36.7931966128163 39.0 35.0 41.0 31.0 41.0 26 36.6407727273384 38.0 35.0 40.0 31.0 41.0 27 36.541145464501426 38.0 35.0 40.0 30.0 41.0 28 36.423302811638216 38.0 35.0 40.0 30.0 41.0 29 36.47850543522569 38.0 35.0 40.0 30.0 41.0 30 36.438671537423666 38.0 35.0 40.0 30.0 41.0 31 36.337901646016725 38.0 35.0 40.0 30.0 41.0 32 36.29097172757968 38.0 35.0 41.0 30.0 41.0 33 36.21916094819183 38.0 35.0 41.0 30.0 41.0 34 36.066078854168104 38.0 35.0 41.0 29.0 41.0 35 35.95842739138269 38.0 35.0 41.0 29.0 41.0 36 35.90710755837654 38.0 35.0 41.0 29.0 41.0 37 35.86235206045694 38.0 35.0 41.0 28.0 41.0 38 35.748074342684134 38.0 35.0 41.0 27.0 41.0 39 35.66722779856796 38.0 35.0 40.0 27.0 41.0 40 35.55992866001826 38.0 34.0 40.0 27.0 41.0 41 35.45109968711874 38.0 34.0 40.0 26.0 41.0 42 35.413119258348196 38.0 34.0 40.0 26.0 41.0 43 35.376808809303014 38.0 34.0 40.0 26.0 41.0 44 35.268501614767814 38.0 34.0 40.0 26.0 41.0 45 35.14483890402601 38.0 34.0 40.0 26.0 41.0 46 35.112237457040486 38.0 34.0 40.0 26.0 41.0 47 35.05641811124075 38.0 34.0 40.0 26.0 41.0 48 34.96393103856805 38.0 34.0 40.0 26.0 41.0 49 34.874726546237966 37.0 34.0 40.0 26.0 41.0 50 34.766749591173856 37.0 34.0 40.0 25.0 41.0 51 34.200719550527566 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 2.0 11 7.0 12 10.0 13 13.0 14 55.0 15 99.0 16 345.0 17 904.0 18 1927.0 19 3735.0 20 6325.0 21 10540.0 22 16287.0 23 23739.0 24 34106.0 25 48796.0 26 64525.0 27 78138.0 28 89962.0 29 104568.0 30 123966.0 31 149934.0 32 182448.0 33 230331.0 34 334398.0 35 424920.0 36 392534.0 37 503337.0 38 743356.0 39 1275043.0 40 617.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.94514371505783 24.781314390246873 28.8985337161084 13.3750081785869 2 30.858381137216774 25.766191692867384 30.066198565976375 13.309228603939468 3 28.711886495042588 25.910423781865273 31.42176967489369 13.95592004819845 4 25.822745202291287 28.516116408587962 30.991529563966253 14.669608825154507 5 23.200210362543082 32.594305556960215 29.605741543444342 14.599742537052352 6 22.406644913517507 41.32639445164665 26.180415189447032 10.086545445388815 7 90.32515997522378 2.850296874964525 5.506763820367065 1.3177793294446258 8 90.40208513202045 2.523153398917516 5.2764630692167485 1.7982983998452828 9 84.15463545793585 6.158553336460977 7.103905102385588 2.582906103217585 10 30.596232917073362 44.679604761145015 12.76839955013128 11.955762771650345 11 33.04592867364063 23.995695328494364 26.231127588226055 16.727248409638946 12 31.108867776037368 22.616491457427284 27.037799416260455 19.236841350274894 13 26.085099822104123 25.602970834281912 29.33886677087098 18.973062572742982 14 21.223789047979462 27.851819072526574 30.39794475465168 20.526447124842285 15 19.856700837507937 26.015316093869746 34.76738447655702 19.360598592065294 16 24.636504382174582 25.34464100802296 31.49326652038434 18.525588089418115 17 23.866489135431003 25.142534451716823 28.314856090926483 22.67612032192569 18 23.99274381322151 24.812996739504424 30.717389523028938 20.47686992424513 19 25.605241230645643 26.563596175744365 27.83386230128614 19.997300292323853 20 26.34693844274339 26.828056072185397 28.208353861500456 18.61665162357076 21 25.823426321200404 25.910939781038845 29.880232463819684 18.385401433941063 22 25.192565731586726 23.43874646050367 29.66235697276907 21.706330835140534 23 22.128191119489102 26.247804681516023 29.80442186523794 21.819582333756934 24 21.414584902400822 26.158144665115508 31.643711239432076 20.783559193051595 25 23.07009601093423 27.057758264294364 29.28437725814138 20.587768466630024 26 21.688683663404245 29.414677369452725 27.322362640503993 21.574276326639037 27 21.239805662327253 27.912913374677938 29.855959862694686 20.991321100300127 28 20.00252220396044 27.85456418813 31.05225234671264 21.090661261196924 29 21.544286454670814 26.347908521189712 30.738277169575284 21.36952785456419 30 23.07857903734781 26.3979810809935 29.538764850714216 20.98467503094447 31 24.214582177925184 26.608302344142963 28.536900855299592 20.64021462263226 32 25.033947585629544 26.861575378500874 28.34187380765491 19.76260322821467 33 25.22245240372023 26.61829208814339 27.53274582355429 20.62650968458209 34 22.48115519418184 27.114229213850493 29.39094140746824 21.013674184499425 35 22.82955783618017 27.794976603565473 28.81157753537742 20.56388802487694 36 24.9699843280731 27.599908275986905 26.9657246516954 20.464382744244595 37 22.040718939584547 29.54964211329319 28.18226494328447 20.227374003837795 38 22.571620169293137 28.892362365992437 27.675966554171964 20.860050910542462 39 22.478471998479247 28.051923552039238 27.551961632778248 21.917642816703264 40 24.336007103451024 26.71571273211449 28.044947243212498 20.903332921221992 41 21.12471720665292 26.26155089950008 29.11446905026637 23.499262843580627 42 22.35700579301952 27.208368103077646 28.12818822989373 22.3064378740091 43 21.87646608265192 26.800687476018936 29.060949615983095 22.261896825346046 44 22.07987295687547 27.432497504111996 28.828192708766558 21.659436830245973 45 21.75270884086152 28.25153267234527 27.29813131931288 22.697627167480327 46 22.458760830048654 27.737184696124988 27.795884762110965 22.00816971171539 47 21.503563799892216 27.383188623085104 28.997357877831625 22.115889699191058 48 21.795681252036907 27.260401459741026 29.671913277463695 21.272004010758376 49 22.60720347230292 26.654845469599497 29.164459050202385 21.5734920078952 50 20.96246642651377 28.64088500875857 28.567943365581904 21.828705199145755 51 20.926779923669276 28.002078031871825 28.080695665957823 22.99044637850108 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2318.0 1 4449.5 2 6581.0 3 23672.0 4 40763.0 5 28396.5 6 16030.0 7 16428.5 8 16827.0 9 17941.0 10 19055.0 11 19507.0 12 19959.0 13 19863.5 14 19768.0 15 19274.5 16 18781.0 17 18568.5 18 18356.0 19 20114.0 20 21872.0 21 22408.0 22 22944.0 23 24371.0 24 25798.0 25 29603.5 26 42233.5 27 51058.0 28 58463.0 29 65868.0 30 78863.0 31 91858.0 32 107298.0 33 122738.0 34 138845.0 35 154952.0 36 172371.5 37 189791.0 38 202024.5 39 214258.0 40 241043.5 41 267829.0 42 291757.0 43 315685.0 44 332182.5 45 348680.0 46 366823.5 47 384967.0 48 393294.0 49 401621.0 50 386368.5 51 371116.0 52 347755.0 53 324394.0 54 304141.5 55 283889.0 56 261945.0 57 240001.0 58 221362.5 59 202724.0 60 182465.5 61 162207.0 62 140788.0 63 119369.0 64 102566.0 65 85763.0 66 73491.0 67 61219.0 68 50509.5 69 39800.0 70 31922.5 71 24045.0 72 19783.5 73 15522.0 74 13076.0 75 8409.0 76 6188.0 77 5075.0 78 3962.0 79 2647.5 80 1333.0 81 1008.5 82 684.0 83 441.5 84 199.0 85 153.0 86 107.0 87 62.0 88 17.0 89 11.5 90 6.0 91 8.0 92 10.0 93 11.0 94 12.0 95 7.0 96 2.0 97 3.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4844969.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.620562533126922 #Duplication Level Percentage of deduplicated Percentage of total 1 78.17037661217788 12.992356327207844 2 8.6194236358872 2.8651933907955085 3 2.9524643652572675 1.472148558287619 4 1.4779218416279167 0.9825556955140357 5 0.8841371400760297 0.7347428312246824 6 0.5879701427859364 0.5863436715471132 7 0.4171879662928467 0.4853729077286814 8 0.35178518620398896 0.4677494148424877 9 0.2741599582751925 0.41010234575330745 >10 2.993662673465197 12.04608837472991 >50 1.5071140498671443 18.34640516451494 >100 1.7580271237599434 47.035546215889696 >500 0.003386330798597526 0.364482743735954 >1k 0.0022575538657316654 0.6823550548157071 >5k 0.0 0.0 >10k+ 1.2541965920731472E-4 0.5285573034125701 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25356 0.5233470018074419 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04322009077870261 0.0 2 0.0 0.0 0.0 0.13060971081548717 0.0 3 0.0 0.0 0.0 0.20090943822344373 0.0 4 0.0 0.0 0.0 0.36322213826342337 0.0 5 0.0 0.0 0.0 0.5882803378102109 0.0 6 0.0 0.0 0.0 0.9831848253311838 0.0 7 0.0 0.0 0.0 1.1575719060328353 0.0 8 0.0 0.0 0.0 1.6473996015247983 0.0 9 0.0 0.0 0.0 1.8510541553516648 0.0 10 0.0 0.0 0.0 2.207630224259433 0.0 11 0.0 0.0 0.0 2.5774158720107394 0.0 12 0.0 0.0 0.0 2.894507684156493 0.0 13 0.0 0.0 0.0 3.047098959766306 0.0 14 0.0 0.0 0.0 3.124829075273753 0.0 15 0.0 0.0 0.0 3.2175644467487823 0.0 16 0.0 0.0 0.0 3.383530420937678 0.0 17 0.0 0.0 0.0 3.5763902720533403 0.0 18 0.0 0.0 0.0 3.7904060892856073 0.0 19 0.0 0.0 0.0 3.924338834778922 0.0 20 0.0 0.0 0.0 4.080665944405424 0.0 21 0.0 0.0 0.0 4.275342112612073 0.0 22 0.0 0.0 0.0 4.489048330340194 0.0 23 0.0 0.0 0.0 4.707109581093295 0.0 24 0.0 0.0 0.0 4.873116835216076 0.0 25 0.0 0.0 0.0 5.02857706623097 0.0 26 0.0 0.0 0.0 5.177349947956324 0.0 27 0.0 0.0 0.0 5.342077524128637 0.0 28 0.0 0.0 0.0 5.502388147375143 0.0 29 0.0 0.0 0.0 5.688209769763232 0.0 30 0.0 0.0 0.0 5.935125694302688 0.0 31 0.0 0.0 0.0 6.13547785341867 0.0 32 0.0 0.0 0.0 6.318244760699192 0.0 33 0.0 0.0 0.0 6.505882700178267 0.0 34 0.0 0.0 0.0 6.718598199493123 0.0 35 0.0 0.0 0.0 6.948135271866549 0.0 36 0.0 0.0 0.0 7.144710317031956 0.0 37 0.0 0.0 0.0 7.3576528559831855 0.0 38 0.0 0.0 0.0 7.60122510587787 0.0 39 0.0 0.0 0.0 7.986820968307537 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14430 0.0 39.792103 1 AGGGCGA 4125 0.0 39.6 6 CGTAAGG 725 0.0 39.41379 2 TAAGGGA 9030 0.0 39.244183 4 TACGGGA 2550 0.0 38.558826 4 TTAGGGA 9210 0.0 38.35505 4 GGGCGAT 8655 0.0 38.188908 7 AAGGGAT 9640 0.0 37.601143 5 CTCACGA 660 0.0 37.5 24 TAGGGAG 9525 0.0 37.228348 5 CGACGGT 655 0.0 37.099236 28 TAGGGAC 6170 0.0 37.050243 5 TATGGGA 8200 0.0 36.932926 4 GTAGGGA 8505 0.0 36.798943 4 TAGGGAT 9045 0.0 36.64179 5 CGTTAGG 645 0.0 36.627907 2 CGGTCTA 665 0.0 36.541355 31 GCGTAAG 425 0.0 36.52941 1 AAGGGAC 5955 0.0 36.38539 5 TGGGCGA 2780 0.0 36.25899 6 >>END_MODULE