##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547452_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3904976 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238909790994875 31.0 31.0 33.0 30.0 34.0 2 31.647634966258437 31.0 31.0 34.0 30.0 34.0 3 31.75847892535063 31.0 31.0 34.0 30.0 34.0 4 35.53567909252195 37.0 35.0 37.0 33.0 37.0 5 35.415588213602334 37.0 35.0 37.0 33.0 37.0 6 35.460283238616576 37.0 35.0 37.0 33.0 37.0 7 35.908663203051695 37.0 35.0 37.0 35.0 37.0 8 35.95032799177255 37.0 35.0 37.0 35.0 37.0 9 37.68221315572746 39.0 37.0 39.0 35.0 39.0 10 36.963659699829144 39.0 37.0 39.0 32.0 39.0 11 36.71017517137109 39.0 37.0 39.0 32.0 39.0 12 36.44682118404825 39.0 35.0 39.0 32.0 39.0 13 36.39233864689565 39.0 35.0 39.0 32.0 39.0 14 37.474494849648245 40.0 36.0 41.0 32.0 41.0 15 37.5692613731813 40.0 36.0 41.0 32.0 41.0 16 37.58627735484162 40.0 36.0 41.0 32.0 41.0 17 37.50568070072646 39.0 36.0 41.0 32.0 41.0 18 37.39038165663502 39.0 36.0 41.0 32.0 41.0 19 37.30550328606373 39.0 36.0 41.0 32.0 41.0 20 37.17566228319969 39.0 35.0 41.0 32.0 41.0 21 37.13199773827035 39.0 35.0 41.0 31.0 41.0 22 37.05629176722213 39.0 35.0 41.0 31.0 41.0 23 36.966496593064846 39.0 35.0 41.0 31.0 41.0 24 36.884179825945154 39.0 35.0 41.0 31.0 41.0 25 36.7897062619591 38.0 35.0 40.0 31.0 41.0 26 36.6617789712408 38.0 35.0 40.0 31.0 41.0 27 36.568859834221776 38.0 35.0 40.0 30.0 41.0 28 36.45335874023297 38.0 35.0 40.0 30.0 41.0 29 36.4893699730805 38.0 35.0 40.0 30.0 41.0 30 36.42120335694765 38.0 35.0 40.0 30.0 41.0 31 36.32291466067909 38.0 35.0 40.0 30.0 41.0 32 36.22926107612441 38.0 35.0 40.0 30.0 41.0 33 36.084909868844264 38.0 35.0 41.0 29.0 41.0 34 35.910729797058934 38.0 35.0 41.0 28.0 41.0 35 35.775311039043515 38.0 35.0 41.0 27.0 41.0 36 35.71810377323702 38.0 35.0 41.0 27.0 41.0 37 35.66855775810146 38.0 35.0 41.0 27.0 41.0 38 35.554969864091355 38.0 34.0 40.0 27.0 41.0 39 35.473834154166376 38.0 34.0 40.0 26.0 41.0 40 35.369518020085145 38.0 34.0 40.0 26.0 41.0 41 35.2707238149479 38.0 34.0 40.0 25.0 41.0 42 35.23367390734283 38.0 34.0 40.0 25.0 41.0 43 35.20728987835008 38.0 34.0 40.0 25.0 41.0 44 35.09424027189924 38.0 34.0 40.0 25.0 41.0 45 34.98925780849869 38.0 34.0 40.0 24.0 41.0 46 34.96350912271932 38.0 34.0 40.0 24.0 41.0 47 34.91568654967406 38.0 34.0 40.0 24.0 41.0 48 34.83333034569227 38.0 34.0 40.0 24.0 41.0 49 34.75831119064496 38.0 34.0 40.0 24.0 41.0 50 34.66683918159804 37.0 33.0 40.0 24.0 41.0 51 34.11426856400654 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 7.0 12 8.0 13 5.0 14 21.0 15 85.0 16 260.0 17 682.0 18 1459.0 19 2949.0 20 5210.0 21 8280.0 22 12991.0 23 19354.0 24 29130.0 25 42992.0 26 58641.0 27 68734.0 28 76858.0 29 86547.0 30 101113.0 31 120591.0 32 146886.0 33 183110.0 34 262260.0 35 334861.0 36 317866.0 37 401708.0 38 594923.0 39 1027000.0 40 437.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.460551870229164 25.913245049393392 27.027285186899995 15.598917893477452 2 29.800516059509714 26.87020355566846 30.22945595568321 13.099824429138618 3 27.40713387226964 26.28935491536952 33.40686344807241 12.896647764288435 4 24.256026157395077 28.62076489074453 32.88929304559106 14.233915906269335 5 23.094303268445184 32.53236383527069 30.570866504685306 13.802466391598822 6 21.270681305083567 41.13103383990068 27.178861022449308 10.41942383256645 7 88.70246577699838 2.4593493020187576 7.38785590487624 1.4503290161066291 8 89.0367828124936 2.0765300478159148 6.978352747878604 1.908334391811883 9 83.26896247249664 5.481134839241009 8.889683316875699 2.3602193713866617 10 32.923172895300766 41.47782214282495 14.285849644146339 11.313155317727945 11 27.417377213073777 24.665093972408535 30.276268023158142 17.641260791359535 12 27.86155407869344 22.74159943620652 29.90691876211275 19.489927722987286 13 24.238612478028035 24.564171457135718 31.540091411573336 19.657124653262915 14 19.720966274824736 27.46165405369969 31.70475311499994 21.112626556475636 15 18.885545007190828 26.566104375545457 35.25535112123608 19.292999496027633 16 22.572225796010017 25.399029341025397 33.886533489578426 18.14221137338616 17 22.10489898017299 26.205922904519774 29.97198958457107 21.717188530736166 18 22.05329815087212 25.42112934881034 32.24334797448179 20.282224525835755 19 23.30931099192415 27.41161533387145 29.59785156169974 19.68122211250466 20 24.662149011927344 26.91181712768529 29.80809613170478 18.617937728682584 21 24.023425496084997 27.045723200347453 30.718191353800893 18.212659949766657 22 22.78574823507238 24.099175001331634 31.20918028689549 21.905896476700498 23 20.848169105264667 27.463267379876342 31.145210623573615 20.543352891285373 24 20.522507692748945 26.11614002237146 33.73308824433236 19.62826404054724 25 21.015366035540296 27.910466031033227 30.028327958993856 21.04583997443262 26 20.404427581629182 29.29037207911137 29.542998471693554 20.762201867565896 27 19.85774048291206 28.626296294778765 30.651788897038035 20.864174325271144 28 18.72080647870819 28.80120133900951 32.15464064311791 20.32335153916439 29 19.85630641519948 26.503799255104255 31.765905859600675 21.87398847009559 30 20.755697346155262 28.054154494163345 31.313329454521615 19.876818705159778 31 22.22205719062038 28.26060902807085 29.85885188538931 19.658481895919465 32 23.28864505185179 27.894102294098605 29.532575872425337 19.284676781624267 33 22.980730227279246 28.418356476454658 28.84842314011661 19.752490156149488 34 21.290630211299636 27.720964226156575 30.511531953077302 20.476873609466487 35 21.192601439803983 28.593261520685402 29.720566784533375 20.49357025497724 36 23.04695342557803 28.573824781509536 28.447396347634403 19.931825445278026 37 21.961031258578796 29.788480134064844 28.855516653623482 19.394971953732878 38 22.00192779673934 29.215595691241127 29.09515961173641 19.687316900283125 39 22.089764444134868 28.471903540508315 28.39781857814235 21.040513437214468 40 23.341321431937097 27.16201072682649 29.390423910415837 20.106243930820575 41 20.738642183716365 27.510079447351277 29.40263909432478 22.348639274607578 42 21.315777612973804 27.907136945271876 28.810881296069425 21.96620414568489 43 21.021179131446647 27.4164297040494 29.66937568886467 21.893015475639288 44 21.07572492122871 27.926471251039697 28.94568366105195 22.052120166679643 45 20.413262463072755 28.31745956953385 28.626142644666704 22.643135322726696 46 21.20881152662654 28.572288280388918 28.615668828694467 21.603231364290075 47 20.8504738569456 27.789389742728254 30.127688364794047 21.2324480355321 48 20.838386714796712 27.141626478626247 30.76213528585067 21.257851520726376 49 21.24287063480032 27.00487787889093 29.97905748972593 21.773193996582823 50 20.23472103285654 27.47960550845895 30.663927255890943 21.621746202793563 51 19.911364372021747 26.93504390295869 30.002233048295302 23.15135867672426 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2007.0 1 3496.5 2 4986.0 3 30935.5 4 56885.0 5 38301.5 6 19718.0 7 19536.5 8 19355.0 9 20180.5 10 21006.0 11 21563.5 12 22121.0 13 22525.0 14 22929.0 15 22216.0 16 21503.0 17 20618.0 18 19733.0 19 19773.5 20 19814.0 21 21295.5 22 22777.0 23 24019.5 24 25262.0 25 28741.5 26 39496.5 27 46772.0 28 57773.5 29 68775.0 30 75278.5 31 81782.0 32 94729.0 33 107676.0 34 120790.5 35 133905.0 36 146009.5 37 158114.0 38 174430.5 39 190747.0 40 207415.5 41 224084.0 42 239361.5 43 254639.0 44 266674.0 45 278709.0 46 299435.0 47 320161.0 48 323855.5 49 327550.0 50 311366.0 51 295182.0 52 270595.0 53 246008.0 54 229562.5 55 213117.0 56 194751.0 57 176385.0 58 160624.5 59 144864.0 60 130370.5 61 115877.0 62 98841.5 63 81806.0 64 67608.5 65 53411.0 66 41984.5 67 30558.0 68 23960.5 69 17363.0 70 13993.5 71 10624.0 72 8871.5 73 7119.0 74 5493.0 75 3443.0 76 3019.0 77 2201.5 78 1384.0 79 972.5 80 561.0 81 481.0 82 401.0 83 246.0 84 91.0 85 68.0 86 45.0 87 40.0 88 35.0 89 22.0 90 9.0 91 11.0 92 13.0 93 9.5 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3904976.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.90961128830783 #Duplication Level Percentage of deduplicated Percentage of total 1 76.82139853460768 15.294841834482199 2 8.675075362034883 3.4543475670978165 3 2.9114120674015056 1.7389524768615796 4 1.5247980912761223 1.2143254916184527 5 0.939682520448703 0.9354356858275527 6 0.6554456508980953 0.7829800877995794 7 0.511174583028778 0.7124101073996063 8 0.3948075528505404 0.6288371928753849 9 0.3438690178376004 0.6161668631314934 >10 4.449483310887665 22.17313112522164 >50 1.8986344094788559 27.105729725348997 >100 0.8695388937689768 23.27534574653328 >500 0.002210002588064208 0.2979078625774356 >1k 0.002340002740303271 0.8033676930096436 >5k 0.0 0.0 >10k+ 1.300001522390706E-4 0.9662205402153099 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37331 0.955985388898677 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.68250560310742E-5 0.0 0.0 0.0862233212188756 0.0 2 7.68250560310742E-5 0.0 0.0 0.23895153260865112 0.0 3 7.68250560310742E-5 0.0 0.0 0.3935491536951828 0.0 4 7.68250560310742E-5 0.0 0.0 0.641873343139625 0.0 5 7.68250560310742E-5 0.0 0.0 1.0222598039014836 0.0 6 7.68250560310742E-5 0.0 0.0 1.643569640376791 0.0 7 7.68250560310742E-5 0.0 0.0 1.9325598928136818 0.0 8 7.68250560310742E-5 0.0 0.0 2.659273706163623 0.0 9 7.68250560310742E-5 0.0 0.0 2.954589221547072 0.0 10 7.68250560310742E-5 0.0 0.0 3.4319801197241673 0.0 11 7.68250560310742E-5 0.0 0.0 3.939051097881267 0.0 12 7.68250560310742E-5 0.0 0.0 4.342024125116262 0.0 13 7.68250560310742E-5 0.0 0.0 4.543459422029739 0.0 14 7.68250560310742E-5 0.0 0.0 4.648735357144321 0.0 15 7.68250560310742E-5 0.0 0.0 4.7712201048098635 0.0 16 7.68250560310742E-5 0.0 0.0 4.989710564162238 0.0 17 7.68250560310742E-5 0.0 0.0 5.260057936335588 0.0 18 7.68250560310742E-5 0.0 0.0 5.5536833004863535 0.0 19 7.68250560310742E-5 0.0 0.0 5.743671664051201 0.0 20 7.68250560310742E-5 0.0 0.0 5.932354001663518 0.0 21 7.68250560310742E-5 0.0 0.0 6.178834389763215 0.0 22 7.68250560310742E-5 0.0 0.0 6.462037154645765 0.0 23 7.68250560310742E-5 0.0 0.0 6.749337255849972 0.0 24 7.68250560310742E-5 0.0 0.0 6.975510220805455 0.0 25 7.68250560310742E-5 0.0 0.0 7.175306583190268 0.0 26 7.68250560310742E-5 0.0 0.0 7.363092628482224 0.0 27 7.68250560310742E-5 0.0 0.0 7.561557356562498 0.0 28 7.68250560310742E-5 0.0 0.0 7.767013164741601 0.0 29 7.68250560310742E-5 0.0 0.0 7.983531780989179 0.0 30 7.68250560310742E-5 0.0 0.0 8.254212061738663 0.0 31 7.68250560310742E-5 0.0 0.0 8.477183982692852 0.0 32 7.68250560310742E-5 0.0 0.0 8.699131569566624 0.0 33 7.68250560310742E-5 0.0 0.0 8.921130373144418 0.0 34 7.68250560310742E-5 0.0 0.0 9.152604266966046 0.0 35 7.68250560310742E-5 0.0 0.0 9.406459860444725 0.0 36 7.68250560310742E-5 0.0 0.0 9.642952991260382 0.0 37 7.68250560310742E-5 0.0 0.0 9.892736856769414 0.0 38 7.68250560310742E-5 0.0 0.0 10.160344135277656 0.0 39 7.68250560310742E-5 0.0 0.0 10.48180577806368 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18295 0.0 42.798576 1 CGACGGT 360 0.0 40.625004 28 CGCGTAA 40 3.461064E-7 39.375 31 TAATGCG 150 0.0 39.0 1 TTAGGGA 6400 0.0 38.777344 4 TAGGGAC 5100 0.0 38.514706 5 CGGTCTA 390 0.0 38.076923 31 TACGGGA 1980 0.0 37.954544 4 CGTTAGG 630 0.0 37.857143 2 GGGCGAT 6890 0.0 37.815678 7 AGGGCGA 3700 0.0 37.7027 6 CGACAAT 215 0.0 37.67442 20 TAAGGGA 6445 0.0 37.49418 4 TAGGGCG 1225 0.0 37.469387 5 ACGGGAC 1845 0.0 37.19512 5 AGGGATT 7395 0.0 37.058826 6 ATAGGGA 6780 0.0 36.93584 4 TAGGGAG 6565 0.0 36.87738 5 TATGGGA 5920 0.0 36.82855 4 AAGGGAT 7800 0.0 36.75 5 >>END_MODULE