SRR1547445_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547445_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	283505
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2729	0.9625932523235922	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	615	0.21692739105130418	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	569	0.2007019276555969	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGG	30	2.159697E-6	45.000004	3
CGGGTGA	30	2.159697E-6	45.000004	6
CAGCGAT	55	1.8189894E-12	45.000004	21
GCGCGAC	30	2.159697E-6	45.000004	9
CGCGACC	30	2.159697E-6	45.000004	10
GTGGCGA	30	2.159697E-6	45.000004	28
CTACGAA	30	2.159697E-6	45.000004	11
CGAATAT	30	2.159697E-6	45.000004	14
GCGATGA	55	1.8189894E-12	45.000004	9
GGCGCGA	30	2.159697E-6	45.000004	8
ACCCGCT	30	2.159697E-6	45.000004	34
GCTACGA	30	2.159697E-6	45.000004	10
CGTTTGT	55	1.8189894E-12	45.000004	39
CCCGCTG	30	2.159697E-6	45.000004	35
CGGGTTG	20	7.024288E-4	45.0	6
GTGCAAG	45	3.8198777E-10	45.0	1
CGGGTAT	40	6.7830115E-9	45.0	6
CTAGAAG	20	7.024288E-4	45.0	30
CGGGTAC	20	7.024288E-4	45.0	6
AAGTACG	20	7.024288E-4	45.0	1