##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547445_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 283505 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.233681945644697 31.0 31.0 33.0 30.0 34.0 2 31.621449357154194 31.0 31.0 34.0 30.0 34.0 3 31.721444066242217 31.0 31.0 34.0 30.0 34.0 4 35.48917655773267 37.0 35.0 37.0 33.0 37.0 5 35.35729528579743 37.0 35.0 37.0 33.0 37.0 6 35.40794342251459 37.0 35.0 37.0 33.0 37.0 7 35.882407717676934 37.0 35.0 37.0 35.0 37.0 8 35.9367524382286 37.0 35.0 37.0 35.0 37.0 9 37.71108446059152 39.0 37.0 39.0 35.0 39.0 10 36.964617907973405 39.0 37.0 39.0 32.0 39.0 11 36.54771520784466 39.0 35.0 39.0 32.0 39.0 12 35.68126488068994 37.0 35.0 39.0 31.0 39.0 13 35.23155499903 37.0 35.0 39.0 30.0 39.0 14 36.24090933140509 38.0 35.0 40.0 30.0 41.0 15 36.588349411826954 38.0 35.0 41.0 31.0 41.0 16 36.78363697289289 38.0 35.0 41.0 32.0 41.0 17 36.74957055431121 38.0 35.0 40.0 32.0 41.0 18 36.66385072573676 38.0 35.0 40.0 31.0 41.0 19 36.54633604345602 37.0 35.0 40.0 31.0 41.0 20 36.376554205393205 37.0 35.0 40.0 31.0 41.0 21 36.24808380804571 37.0 35.0 40.0 31.0 41.0 22 36.13704520202466 37.0 35.0 40.0 31.0 41.0 23 36.14135200437382 37.0 35.0 40.0 31.0 41.0 24 36.052355337648365 37.0 35.0 40.0 31.0 41.0 25 35.95016666372727 37.0 35.0 40.0 31.0 41.0 26 35.77888220666302 36.0 34.0 40.0 30.0 41.0 27 35.68967037618384 36.0 34.0 40.0 30.0 41.0 28 35.66892294668524 36.0 34.0 40.0 30.0 41.0 29 35.69939154512266 36.0 34.0 40.0 30.0 41.0 30 35.66004126911342 36.0 34.0 40.0 30.0 41.0 31 35.51454824429904 36.0 34.0 40.0 30.0 41.0 32 35.304791802613714 36.0 34.0 40.0 29.0 41.0 33 35.19798592617414 36.0 34.0 40.0 29.0 41.0 34 35.1284986155447 36.0 34.0 40.0 28.0 41.0 35 35.01755877321388 36.0 34.0 40.0 27.0 41.0 36 34.88950106700058 36.0 34.0 40.0 26.0 41.0 37 34.8088181866281 36.0 34.0 40.0 26.0 41.0 38 34.755813830443905 36.0 34.0 40.0 27.0 41.0 39 34.71715842754096 36.0 34.0 40.0 26.0 41.0 40 34.60718153118992 36.0 34.0 40.0 25.0 41.0 41 34.576391950759245 36.0 34.0 40.0 25.0 41.0 42 34.52815999717818 36.0 34.0 40.0 25.0 41.0 43 34.46587185411192 35.0 33.0 40.0 25.0 41.0 44 34.35591259413414 35.0 33.0 40.0 24.0 41.0 45 34.20901571400857 35.0 33.0 40.0 24.0 41.0 46 34.2015625826705 35.0 33.0 40.0 24.0 41.0 47 34.18070228038306 35.0 33.0 40.0 24.0 41.0 48 34.14789157157722 35.0 33.0 40.0 24.0 41.0 49 34.116114354244196 35.0 33.0 40.0 24.0 41.0 50 33.95646637625439 35.0 33.0 40.0 24.0 41.0 51 33.36912223770304 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 7.0 16 19.0 17 50.0 18 117.0 19 255.0 20 462.0 21 780.0 22 1158.0 23 1680.0 24 2604.0 25 3612.0 26 4659.0 27 5277.0 28 5782.0 29 6647.0 30 8039.0 31 9789.0 32 12238.0 33 16089.0 34 27376.0 35 44128.0 36 21532.0 37 23675.0 38 32126.0 39 55375.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.72677730551489 25.12654097811326 29.581841590095415 13.564840126276431 2 29.488016084372408 26.391774395513306 31.364173471367344 12.756036048746935 3 27.4876986296538 26.151566991763815 33.28618542882841 13.074548949753972 4 23.594292869614293 28.58009558914305 32.895363397470945 14.930248143771715 5 22.73751785682792 32.00296291070705 31.748999135817712 13.510520096647324 6 20.797869526110652 40.99998236362674 27.58081868044655 10.621329429816052 7 87.43725860214106 4.257067776582424 6.8291564522671555 1.476517169009365 8 88.70178656461086 3.050739845858098 6.208356113648789 2.0391174758822594 9 85.28879561207033 4.923369958201795 7.59704414384226 2.1907902858856105 10 50.30493289359976 28.89331757817322 12.037882929754325 8.76386659847269 11 40.62397488580448 22.403484947355427 24.131849526463377 12.840690640376712 12 37.996860725560396 23.013350734554948 24.783689882012663 14.206098657871996 13 20.532265744872223 41.48498262817234 25.083155499902997 12.899596127052432 14 14.651946173788822 43.75972205075748 27.05137475529532 14.536957020158376 15 12.935927055960212 26.752261864870107 46.408352586374136 13.903458492795542 16 14.61808433713691 23.25038359111832 44.802737165129365 17.328794906615403 17 15.501666637272713 23.60628560342851 28.21643357260013 32.675614186698645 18 19.561207033385656 26.316290717976752 34.82054990211813 19.301952346519464 19 26.255621593975416 27.95118251882683 26.000599636690712 19.792596250507046 20 28.51977919260683 27.704626020705103 25.314897444489514 18.46069734219855 21 20.284298336890004 31.74053367665473 28.754695684379467 19.2204723020758 22 20.821854993739088 27.233382127299343 25.51383573481949 26.430927144142082 23 17.275885786846793 33.94754942593605 25.822472266803054 22.9540925204141 24 17.850478827533905 27.082767499691364 38.87127211160297 16.19548156117176 25 15.248055589848503 30.076365496199365 34.92460450432973 19.750974409622405 26 15.434295691434013 38.37569002310365 26.665490908449584 19.524523377012752 27 15.994779633516162 38.10444260242324 27.968113437152788 17.932664326907815 28 13.438563693762015 33.22022539285022 37.25648577626497 16.084725137122803 29 13.721451120791519 28.00973527803742 36.50341263822507 21.76540096294598 30 16.687889102484966 34.442426059505124 31.072115130244615 17.797569707765295 31 25.94275233241036 30.40263840143913 24.551595209961025 19.103014056189487 32 27.494400451491156 31.246009770550785 25.089504594275237 16.17008518368283 33 24.829897179943917 31.669988183629915 24.373115112608243 19.126999523817922 34 17.06671840002822 31.5920354138375 26.991411086224225 24.349835099910056 35 17.225093031868926 30.764536780656428 29.9948854517557 22.015484735718946 36 27.692280559425758 28.448880972116893 25.764977689987834 18.093860778469516 37 17.477645896897762 36.259677959824344 28.44076824041904 17.821907902858854 38 18.325955450521157 36.35032891836123 24.586162501543182 20.737553129574433 39 17.74007513095007 36.25438704784748 27.029152924992506 18.976384896209943 40 22.838397911853406 30.123630976525988 25.401668400910037 21.63630271071057 41 16.54256538685385 28.553288301793618 27.163189361739654 27.740956949612883 42 20.241265586144866 29.29401597855417 24.43942787605157 26.0252905592494 43 19.805647166716636 29.37020511102097 26.195657924904324 24.62848979735807 44 18.391562759034233 33.522865557926664 27.54307684167828 20.542494841360824 45 16.491772631875982 39.529108834059365 22.597837780638788 21.381280753425866 46 20.717800391527486 35.8222959030705 24.355126011886917 19.104777693515103 47 19.682192553923212 30.956773249149045 25.946279607061605 23.414754589866142 48 20.62538579566498 28.250648136717167 30.149732808945167 20.974233258672687 49 19.28537415565863 27.88980793989524 31.006860549196663 21.81795735524947 50 18.60108287331793 35.77820496992998 25.952628701433838 19.668083455318246 51 16.725278213788116 35.834641364349835 24.131849526463377 23.308230895398673 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 659.0 1 576.5 2 494.0 3 1930.0 4 3366.0 5 2171.0 6 976.0 7 1164.5 8 1353.0 9 1712.0 10 2071.0 11 2313.0 12 2555.0 13 2664.0 14 2773.0 15 2530.0 16 2287.0 17 2089.0 18 1891.0 19 1745.0 20 1599.0 21 1569.5 22 1540.0 23 1594.5 24 1649.0 25 1741.0 26 2226.0 27 2619.0 28 2984.0 29 3349.0 30 3974.0 31 4599.0 32 5087.5 33 5576.0 34 6713.5 35 7851.0 36 8617.5 37 9384.0 38 11100.5 39 12817.0 40 16874.0 41 20931.0 42 26120.0 43 31309.0 44 32786.0 45 34263.0 46 32422.5 47 30582.0 48 28210.0 49 25838.0 50 22895.5 51 19953.0 52 17724.5 53 15496.0 54 13332.5 55 11169.0 56 9563.0 57 7957.0 58 6846.0 59 5735.0 60 4788.0 61 3841.0 62 3141.0 63 2441.0 64 1898.5 65 1356.0 66 956.5 67 557.0 68 446.5 69 336.0 70 276.0 71 216.0 72 176.5 73 137.0 74 103.5 75 48.5 76 27.0 77 25.5 78 24.0 79 19.5 80 15.0 81 10.5 82 6.0 83 5.5 84 5.0 85 2.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 283505.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.939807058076575 #Duplication Level Percentage of deduplicated Percentage of total 1 75.84648662540424 24.983686354738012 2 7.946587282890369 5.2351810373714756 3 3.3666716638468293 3.3269254510502457 4 1.8921465744329984 2.49307772349694 5 1.3749384276015677 2.2645103260965413 6 0.9787334289936392 1.9343574187404102 7 0.8106140106654102 1.869102837692457 8 0.6103698627203221 1.608437240965768 9 0.5771743087829011 1.7110809333168726 >10 6.252543207761335 45.50254845593552 >50 0.308397404321847 6.22740339676549 >100 0.032124729616859055 1.4634662527997742 >500 0.0021416486411239373 0.4176293187069012 >1k 0.0010708243205619686 0.9625932523235922 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2729 0.9625932523235922 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 615 0.21692739105130418 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 569 0.2007019276555969 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09382550572300312 0.0 2 0.0 0.0 0.0 0.3111056242394314 0.0 3 0.0 0.0 0.0 0.46983298354526376 0.0 4 0.0 0.0 0.0 0.7551895028306379 0.0 5 0.0 0.0 0.0 1.285691610377242 0.0 6 0.0 0.0 0.0 1.9156628630888344 0.0 7 0.0 0.0 0.0 2.258161231724308 0.0 8 0.0 0.0 0.0 3.0817798627890163 0.0 9 0.0 0.0 0.0 3.3777182060281126 0.0 10 0.0 0.0 0.0 3.880707571295039 0.0 11 0.0 0.0 0.0 4.538897021216557 0.0 12 0.0 0.0 0.0 5.061286397065308 0.0 13 0.0 0.0 0.0 5.288090157140085 0.0 14 0.0 0.0 0.0 5.390028394560942 0.0 15 0.0 0.0 0.0 5.524770286238338 0.0 16 0.0 0.0 0.0 5.802014073825858 0.0 17 0.0 0.0 0.0 6.157210631205799 0.0 18 0.0 0.0 0.0 6.590359958378159 0.0 19 0.0 0.0 0.0 6.818927355778558 0.0 20 0.0 0.0 0.0 7.054902029946562 0.0 21 0.0 0.0 0.0 7.371298566162854 0.0 22 0.0 0.0 0.0 7.71309147986808 0.0 23 0.0 0.0 0.0 8.077458951341246 0.0 24 0.0 0.0 0.0 8.362462743161496 0.0 25 0.0 0.0 0.0 8.60090650958537 0.0 26 0.0 0.0 0.0 8.82453572247403 0.0 27 0.0 0.0 0.0 9.027706742385496 0.0 28 0.0 0.0 0.0 9.251335955274158 0.0 29 0.0 0.0 0.0 9.506710640023986 0.0 30 0.0 0.0 0.0 9.829103543147387 0.0 31 0.0 0.0 0.0 10.128569161037724 0.0 32 0.0 0.0 0.0 10.372656566903581 0.0 33 0.0 0.0 0.0 10.640376712932753 0.0 34 0.0 0.0 0.0 10.897162307543077 0.0 35 0.0 0.0 0.0 11.23436976420169 0.0 36 0.0 0.0 0.0 11.52113719334756 0.0 37 0.0 0.0 0.0 11.808962804888802 0.0 38 0.0 0.0 0.0 12.094319324174176 0.0 39 0.0 0.0 0.0 12.375090386412937 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 30 2.159697E-6 45.000004 3 CGGGTGA 30 2.159697E-6 45.000004 6 CAGCGAT 55 1.8189894E-12 45.000004 21 GCGCGAC 30 2.159697E-6 45.000004 9 CGCGACC 30 2.159697E-6 45.000004 10 GTGGCGA 30 2.159697E-6 45.000004 28 CTACGAA 30 2.159697E-6 45.000004 11 CGAATAT 30 2.159697E-6 45.000004 14 GCGATGA 55 1.8189894E-12 45.000004 9 GGCGCGA 30 2.159697E-6 45.000004 8 ACCCGCT 30 2.159697E-6 45.000004 34 GCTACGA 30 2.159697E-6 45.000004 10 CGTTTGT 55 1.8189894E-12 45.000004 39 CCCGCTG 30 2.159697E-6 45.000004 35 CGGGTTG 20 7.024288E-4 45.0 6 GTGCAAG 45 3.8198777E-10 45.0 1 CGGGTAT 40 6.7830115E-9 45.0 6 CTAGAAG 20 7.024288E-4 45.0 30 CGGGTAC 20 7.024288E-4 45.0 6 AAGTACG 20 7.024288E-4 45.0 1 >>END_MODULE