##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547444_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4648805 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.219524372392474 31.0 31.0 33.0 30.0 34.0 2 31.62600087549381 31.0 31.0 34.0 30.0 34.0 3 31.72545374564001 31.0 31.0 34.0 30.0 34.0 4 35.52602055797135 37.0 35.0 37.0 33.0 37.0 5 35.41154361174539 37.0 35.0 37.0 33.0 37.0 6 35.46001370244611 37.0 35.0 37.0 33.0 37.0 7 35.862927569558195 37.0 35.0 37.0 35.0 37.0 8 35.89693200725778 37.0 35.0 37.0 35.0 37.0 9 37.652425300695555 39.0 37.0 39.0 35.0 39.0 10 36.92230971185068 39.0 37.0 39.0 32.0 39.0 11 36.676741872373654 39.0 35.0 39.0 32.0 39.0 12 36.340828664570786 38.0 35.0 39.0 32.0 39.0 13 36.24633255212899 39.0 35.0 39.0 32.0 39.0 14 37.3244037983955 39.0 36.0 41.0 32.0 41.0 15 37.43404767461745 39.0 36.0 41.0 32.0 41.0 16 37.46835477074216 39.0 36.0 41.0 32.0 41.0 17 37.38863041147133 39.0 35.0 41.0 32.0 41.0 18 37.247131682228016 39.0 36.0 41.0 32.0 41.0 19 37.136859042270004 39.0 35.0 41.0 32.0 41.0 20 36.97769620364804 39.0 35.0 41.0 31.0 41.0 21 36.920416322044055 39.0 35.0 41.0 31.0 41.0 22 36.84520538073763 39.0 35.0 41.0 31.0 41.0 23 36.755200099810594 38.0 35.0 40.0 31.0 41.0 24 36.648430080418514 38.0 35.0 40.0 31.0 41.0 25 36.52531327943418 38.0 35.0 40.0 31.0 41.0 26 36.3772634042512 38.0 35.0 40.0 30.0 41.0 27 36.274232410264574 38.0 35.0 40.0 30.0 41.0 28 36.16052232778101 38.0 35.0 40.0 30.0 41.0 29 36.16732515130232 38.0 35.0 40.0 30.0 41.0 30 36.082217903310635 38.0 35.0 40.0 30.0 41.0 31 35.95353042340989 38.0 35.0 40.0 30.0 41.0 32 35.84764321153501 38.0 35.0 40.0 29.0 41.0 33 35.689738115494194 38.0 34.0 40.0 27.0 41.0 34 35.508187372884 38.0 34.0 40.0 27.0 41.0 35 35.35835015665316 38.0 34.0 40.0 26.0 41.0 36 35.283665802286826 38.0 34.0 40.0 25.0 41.0 37 35.23301751740501 38.0 34.0 40.0 25.0 41.0 38 35.10976175597815 38.0 34.0 40.0 25.0 41.0 39 35.022228723295555 38.0 34.0 40.0 24.0 41.0 40 34.91396864355463 38.0 34.0 40.0 24.0 41.0 41 34.79943447832292 38.0 34.0 40.0 24.0 41.0 42 34.74902969687909 38.0 34.0 40.0 23.0 41.0 43 34.709342508451094 38.0 33.0 40.0 23.0 41.0 44 34.58050015003856 37.0 33.0 40.0 23.0 41.0 45 34.46232182248986 37.0 33.0 40.0 23.0 41.0 46 34.43274841599077 37.0 33.0 40.0 23.0 41.0 47 34.386083735497614 37.0 33.0 40.0 23.0 41.0 48 34.28518812899229 37.0 33.0 40.0 23.0 41.0 49 34.194854591663876 37.0 33.0 40.0 23.0 41.0 50 34.10088743236165 36.0 33.0 40.0 23.0 41.0 51 33.52369867094877 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 4.0 11 5.0 12 8.0 13 19.0 14 51.0 15 153.0 16 384.0 17 1072.0 18 2418.0 19 4620.0 20 7674.0 21 12271.0 22 18862.0 23 27576.0 24 41345.0 25 59927.0 26 80122.0 27 92249.0 28 98953.0 29 109379.0 30 125164.0 31 148961.0 32 180190.0 33 226772.0 34 333363.0 35 426891.0 36 389535.0 37 477768.0 38 689190.0 39 1093430.0 40 446.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.394927298520805 23.151003322359188 27.61464505394397 16.83942432517604 2 33.06217404257653 24.740056853320368 29.56751251127978 12.630256592823317 3 28.09003604152035 25.451379440522885 33.94007707357052 12.518507444386245 4 25.14050384991412 27.312954619520504 33.4690097777816 14.07753175278378 5 22.23016452615242 31.971119459732122 31.691025973341535 14.107690040773917 6 20.482769227790797 40.04616240087506 29.216970812929343 10.254097558404794 7 86.95731483682366 3.0814370574803633 8.39131776875993 1.5699303369360513 8 87.95505511631484 2.2835330800065825 8.047250852638474 1.7141609510401061 9 83.13717181082019 4.6158098694180545 9.641079804379835 2.60593851538191 10 36.78160301410793 30.52124148033742 18.05724266773934 14.639912837815308 11 30.26797209175261 25.150635485893684 26.973361971517413 17.60803045083629 12 28.519372182743734 22.054635546124217 29.69483555451347 19.73115671661857 13 23.78258498689448 24.930557422821565 31.18246517115689 20.104392419127066 14 20.771294988712153 27.66018363859099 31.052173623113898 20.51634774958296 15 19.72121867877874 26.16844543920427 35.369433650153105 18.74090223186389 16 22.990273844568655 24.47095543908596 33.749404416834004 18.78936629951138 17 23.317325635297674 24.13474000307606 30.04258083528993 22.50535352633634 18 23.927374884513334 25.247219446718027 31.336031517777148 19.48937415099149 19 25.315193904670124 26.509006077906044 28.7871399209044 19.388660096519427 20 26.184449552089195 26.2496060815629 28.00358371667557 19.562360649672335 21 24.708500356543244 26.678619559220056 30.054540898144793 18.55833918609191 22 24.672426569838915 22.87075925963769 30.55090501752601 21.90590915299738 23 22.610197674456124 26.178770673323577 29.92758354028616 21.283448111934142 24 22.55097815460102 25.935589898909505 31.812562583287534 19.700869363201942 25 22.624631491318738 26.385146290283203 30.446749218347513 20.54347300005055 26 21.472034210942383 28.1490404523313 29.011799806616967 21.36712553010935 27 20.698738708119613 28.028622409414893 30.933949692447843 20.33868919001765 28 19.657632445327348 27.605997670369053 32.37333035048792 20.36303953381568 29 21.460396811653748 26.205250596658715 31.429539419270114 20.904813172417427 30 22.3814937387135 26.429824438753613 31.16751509258831 20.02116672994458 31 24.124027572677278 26.60154598870032 28.62712030295958 20.64730613566282 32 24.67733105604559 26.64043770388304 28.52634171577427 20.155889524297105 33 23.657348501389066 26.66732633440207 28.534601903069714 21.14072326113915 34 21.79181531597905 27.26821193833684 29.753108594574307 21.186864151109802 35 22.051903661263488 26.93664285768063 29.201956201647523 21.80949727940836 36 24.748187975189325 27.71611199007057 27.72415706832186 19.81154296641825 37 22.315369218541107 28.803294610120233 27.88159537773686 20.999740793601795 38 22.745243132374878 28.62301172021627 27.26195226515201 21.36979288225684 39 22.469258228727597 27.602061174861063 27.508101544375386 22.42057905203595 40 23.512709180101123 26.374885588877138 28.653062453684335 21.4593427773374 41 21.40137088993838 26.300264261460743 28.985147796046512 23.313217052554368 42 22.82466139147587 27.158613880341292 27.68971811035309 22.327006617829742 43 22.131945736592524 26.773998909397147 28.517672821294937 22.576382532715396 44 22.333137225588082 27.12843408144674 28.685952626535205 21.852476066429976 45 21.465064677911847 28.416162863359506 27.496184503329353 22.62258795539929 46 22.326963596020914 27.817299284439766 28.00169075708704 21.854046362452287 47 22.50251408695353 27.355610742975884 28.406203314615265 21.735671855455326 48 22.420794161080103 27.30839430778447 28.97755444678794 21.293257084347484 49 21.757462401627944 26.798069611437782 29.387057534140492 22.057410452793782 50 21.287814825530432 27.41661566789745 29.517585702132052 21.777983804440066 51 21.07980437983525 28.1802742855422 28.395426351503232 22.34449498311932 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4189.0 1 5162.5 2 6136.0 3 42084.0 4 78032.0 5 52600.0 6 27168.0 7 27470.0 8 27772.0 9 30056.5 10 32341.0 11 33254.5 12 34168.0 13 33435.0 14 32702.0 15 30794.0 16 28886.0 17 27414.0 18 25942.0 19 24733.0 20 23524.0 21 23424.5 22 23325.0 23 24460.0 24 25595.0 25 29146.5 26 37326.5 27 41955.0 28 48056.5 29 54158.0 30 64266.0 31 74374.0 32 84731.0 33 95088.0 34 111682.0 35 128276.0 36 138137.5 37 147999.0 38 165685.0 39 183371.0 40 206122.5 41 228874.0 42 248937.5 43 269001.0 44 287790.0 45 306579.0 46 317742.0 47 328905.0 48 347414.5 49 365924.0 50 368996.5 51 372069.0 52 354313.0 53 336557.0 54 310986.0 55 285415.0 56 265326.5 57 245238.0 58 227102.0 59 208966.0 60 189343.0 61 169720.0 62 151670.5 63 133621.0 64 115639.0 65 97657.0 66 81778.5 67 65900.0 68 53685.0 69 41470.0 70 34275.0 71 27080.0 72 22195.5 73 17311.0 74 13797.5 75 8033.0 76 5782.0 77 4212.5 78 2643.0 79 1856.5 80 1070.0 81 798.5 82 527.0 83 472.0 84 417.0 85 239.5 86 62.0 87 37.5 88 13.0 89 12.5 90 12.0 91 8.0 92 4.0 93 4.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4648805.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.975861190011912 #Duplication Level Percentage of deduplicated Percentage of total 1 78.36945958834046 14.087585270962563 2 7.353601814521994 2.6437465092893424 3 2.6765529961345886 1.4434003537867757 4 1.4219886125936096 1.022458796550414 5 0.9269246645384511 0.8331134551670779 6 0.6793547288679649 0.7327191782945229 7 0.5233669723255219 0.6585580432172272 8 0.4434060253014525 0.6376484129307057 9 0.35237970685932785 0.570089582701233 >10 4.136999287655856 17.95378065630592 >50 1.8375747912807283 23.9229646882961 >100 1.2707500262327671 32.95492780046812 >500 0.005336421512441573 0.6657536017109045 >1k 0.002183081527816633 0.7267979113938351 >5k 0.0 0.0 >10k+ 1.2128230710092409E-4 1.1464557389254044 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 52586 1.131172419578795 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.604361766088274E-5 0.0 0.0 0.04269914526421306 0.0 2 8.604361766088274E-5 0.0 0.0 0.11977271578394878 0.0 3 8.604361766088274E-5 0.0 0.0 0.2209815210575621 0.0 4 8.604361766088274E-5 0.0 0.0 0.3387537227308954 0.0 5 8.604361766088274E-5 0.0 0.0 0.5771805872692014 0.0 6 8.604361766088274E-5 0.0 0.0 1.0480542849183823 0.0 7 8.604361766088274E-5 0.0 0.0 1.3153487831819144 0.0 8 8.604361766088274E-5 0.0 0.0 1.8339766886328852 0.0 9 8.604361766088274E-5 0.0 0.0 2.116027667325259 0.0 10 8.604361766088274E-5 0.0 0.0 2.516969414720557 0.0 11 8.604361766088274E-5 0.0 0.0 2.868134929299035 0.0 12 8.604361766088274E-5 0.0 0.0 3.141430969894414 0.0 13 8.604361766088274E-5 0.0 0.0 3.294502565713124 0.0 14 8.604361766088274E-5 0.0 0.0 3.383514688183307 0.0 15 8.604361766088274E-5 0.0 0.0 3.460803367747195 0.0 16 8.604361766088274E-5 0.0 0.0 3.5887072054000972 0.0 17 8.604361766088274E-5 0.0 0.0 3.725688644716223 0.0 18 8.604361766088274E-5 0.0 0.0 3.8990450233984864 0.0 19 8.604361766088274E-5 0.0 0.0 4.004405433224237 0.0 20 8.604361766088274E-5 0.0 0.0 4.115530765433268 0.0 21 8.604361766088274E-5 0.0 0.0 4.255437687749863 0.0 22 8.604361766088274E-5 0.0 0.0 4.408057554575853 0.0 23 8.604361766088274E-5 0.0 0.0 4.568098683425095 0.0 24 1.0755452207610343E-4 0.0 0.0 4.7024127705937335 0.0 25 1.0755452207610343E-4 0.0 0.0 4.818722230766832 0.0 26 1.0755452207610343E-4 0.0 0.0 4.935053201844345 0.0 27 1.0755452207610343E-4 0.0 0.0 5.058375216856805 0.0 28 1.0755452207610343E-4 0.0 0.0 5.183439615126898 0.0 29 1.0755452207610343E-4 0.0 0.0 5.319603640075245 0.0 30 1.0755452207610343E-4 0.0 0.0 5.491733897205841 0.0 31 1.505763309065448E-4 0.0 0.0 5.635061053324456 0.0 32 1.505763309065448E-4 0.0 0.0 5.782367726759888 0.0 33 1.505763309065448E-4 0.0 0.0 5.928943029445201 0.0 34 1.505763309065448E-4 0.0 0.0 6.0789385659325355 0.0 35 1.7208723532176549E-4 0.0 0.0 6.244787638973887 0.0 36 1.7208723532176549E-4 0.0 0.0 6.393922739284612 0.0 37 1.7208723532176549E-4 0.0 0.0 6.556244024001868 0.0 38 1.7208723532176549E-4 0.0 0.0 6.741560465538994 0.0 39 1.7208723532176549E-4 0.0 0.0 7.01711515109797 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 26060 0.0 42.876057 1 TCGATAG 175 0.0 39.857143 1 CGGTCTA 660 0.0 38.522728 31 CACGACG 675 0.0 38.0 26 GGCGATA 1850 0.0 37.7027 8 GCGATAT 450 0.0 37.500004 9 GGGCGAT 7410 0.0 37.287453 7 TATGGGC 2125 0.0 37.164703 4 TACGGGA 1605 0.0 37.149532 4 TAATCCG 85 0.0 37.058823 1 TCTCACG 700 0.0 36.64286 23 ATAGGGC 2925 0.0 36.53846 4 AGGGCGA 3870 0.0 36.39535 6 GTAGGGC 2630 0.0 36.359314 4 TAGGGAC 4590 0.0 36.32353 5 TAGGGCA 3660 0.0 36.270493 5 TTAGGGA 5575 0.0 36.201794 4 ATAGGGA 5445 0.0 36.15703 4 GTTTTTT 32095 0.0 36.131798 2 TAGGGAT 5590 0.0 36.0644 5 >>END_MODULE