##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547441_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2661159 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30983755574169 31.0 31.0 33.0 30.0 34.0 2 31.721116626251945 31.0 31.0 34.0 30.0 34.0 3 31.810739230538275 31.0 31.0 34.0 30.0 34.0 4 35.61689925329527 37.0 35.0 37.0 33.0 37.0 5 35.51642836824106 37.0 35.0 37.0 33.0 37.0 6 35.56251543030687 37.0 35.0 37.0 33.0 37.0 7 35.919007470053465 37.0 35.0 37.0 35.0 37.0 8 35.95083382841837 37.0 35.0 37.0 35.0 37.0 9 37.70523745480823 39.0 37.0 39.0 35.0 39.0 10 37.05486519219633 39.0 37.0 39.0 33.0 39.0 11 36.80315155915148 39.0 37.0 39.0 32.0 39.0 12 36.41634678724571 39.0 35.0 39.0 32.0 39.0 13 36.27892809110617 39.0 35.0 39.0 32.0 39.0 14 37.379708239905995 39.0 36.0 41.0 32.0 41.0 15 37.51266497041327 40.0 36.0 41.0 32.0 41.0 16 37.56948758041139 40.0 36.0 41.0 32.0 41.0 17 37.50778739639383 39.0 35.0 41.0 32.0 41.0 18 37.36930525383865 39.0 36.0 41.0 32.0 41.0 19 37.248832933319655 39.0 36.0 41.0 32.0 41.0 20 37.07494554064601 39.0 35.0 41.0 32.0 41.0 21 36.98666408132697 39.0 35.0 41.0 31.0 41.0 22 36.926990082140904 39.0 35.0 41.0 31.0 41.0 23 36.84560824813549 38.0 35.0 41.0 31.0 41.0 24 36.7373621794113 38.0 35.0 40.0 31.0 41.0 25 36.63293737803716 38.0 35.0 40.0 31.0 41.0 26 36.50519679583219 38.0 35.0 40.0 31.0 41.0 27 36.41054630707898 38.0 35.0 40.0 31.0 41.0 28 36.2797307488955 38.0 35.0 40.0 30.0 41.0 29 36.29252479840551 38.0 35.0 40.0 30.0 41.0 30 36.22557877977227 38.0 35.0 40.0 30.0 41.0 31 36.09003182447948 38.0 35.0 40.0 30.0 41.0 32 35.937367515432186 38.0 35.0 40.0 29.0 41.0 33 35.76522973636675 38.0 35.0 40.0 29.0 41.0 34 35.551288742987545 38.0 35.0 40.0 27.0 41.0 35 35.383962401344675 38.0 34.0 40.0 26.0 41.0 36 35.30354029954618 38.0 34.0 40.0 26.0 41.0 37 35.25006397588419 38.0 34.0 40.0 25.0 41.0 38 35.13308073662641 38.0 34.0 40.0 25.0 41.0 39 35.05702703220664 38.0 34.0 40.0 25.0 41.0 40 34.95433906805268 38.0 34.0 40.0 24.0 41.0 41 34.842473147978005 38.0 34.0 40.0 24.0 41.0 42 34.797937289729774 38.0 34.0 40.0 24.0 41.0 43 34.75646550995262 38.0 34.0 40.0 24.0 41.0 44 34.632559347261854 37.0 34.0 40.0 23.0 41.0 45 34.496565969940164 37.0 33.0 40.0 23.0 41.0 46 34.47297512099052 37.0 33.0 40.0 23.0 41.0 47 34.42487051694393 37.0 33.0 40.0 23.0 41.0 48 34.33657177192344 37.0 33.0 40.0 23.0 41.0 49 34.24588985475877 36.0 33.0 40.0 23.0 41.0 50 34.1410967927884 36.0 33.0 40.0 23.0 41.0 51 33.583912874052245 35.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 1.0 11 4.0 12 4.0 13 7.0 14 30.0 15 69.0 16 201.0 17 487.0 18 1211.0 19 2199.0 20 3886.0 21 6339.0 22 9893.0 23 14848.0 24 22782.0 25 34244.0 26 45276.0 27 51162.0 28 54223.0 29 58223.0 30 67167.0 31 80950.0 32 99357.0 33 128451.0 34 195943.0 35 261903.0 36 221448.0 37 276897.0 38 388790.0 39 634843.0 40 318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.830093955302935 23.292933642822543 27.363190249060654 16.513782152813867 2 33.75656997571359 24.85980732455295 28.482627306372898 12.900995393360562 3 27.540819620323326 25.022368073459724 33.95505492155861 13.481757384658339 4 25.356771241402715 27.44672528022565 32.43455201286356 14.761951465508075 5 22.534880478768837 31.226582102008937 31.201893611016857 15.03664380820537 6 21.23803951586508 40.03537556380509 28.733307555091596 9.993277365238228 7 85.88592414057183 3.3108882257692986 9.048726513522867 1.754461120136001 8 86.18925062350652 2.8254982133724442 8.815858052825854 2.169393110295176 9 80.9823839913361 5.243241760450991 10.719915645776897 3.0544586024360063 10 39.32527143248487 30.950386654837235 17.46599883734869 12.258343075329208 11 31.085252703803118 23.784411228340733 28.052476383410387 17.077859684445762 12 29.129037385590262 20.95834935079039 31.533703923741495 18.37890933987785 13 23.414685105249255 26.141579665100807 32.276049646037684 18.167685583612254 14 19.373025061636678 28.921608968122538 32.58595221104789 19.119413759192895 15 18.051307719681535 25.053632646527323 38.94476053478954 17.9502990990016 16 22.21858971974241 23.553797424355327 35.633383800066056 18.5942290558362 17 21.684085768644415 24.07766691129692 30.5130959856213 23.725151334437363 18 22.71641792166496 24.810280032121344 32.65265247209956 19.820649574114135 19 25.11894253594017 26.3057186737057 28.503708346626418 20.071630443727713 20 26.4532859554803 25.482806551581472 28.752058783409783 19.31184870952844 21 24.16052554544843 25.83964355380494 30.638492476398444 19.361338424348187 22 23.738115610529096 23.619858866005377 30.05077862690655 22.59124689655898 23 21.5686473450102 26.63275662972412 30.15990401174826 21.638692013517417 24 20.700980287160593 25.182636588043028 34.06451850490707 20.051864619889304 25 21.369147803644953 26.329768345296166 31.681045739844933 20.620038111213947 26 20.807137040665364 28.627338689646127 29.252442262938814 21.31308200674969 27 19.785176308518206 28.075323571421322 31.242702897496915 20.896797222563553 28 19.200581400810698 26.63737867598291 33.66506849083425 20.496971432372135 29 20.091922354132166 24.797315756029608 33.17509400979047 21.935667880047756 30 20.80702430782978 26.298804393123447 32.754112024121824 20.140059274924948 31 23.750929576173387 26.108962298006244 29.56538861450969 20.574719511310676 32 24.47527562238859 25.786583965858483 29.44735733565713 20.290783076095792 33 23.293459729388584 26.35411863778151 28.937504297939356 21.41491733489055 34 20.501518323407208 26.671649457999315 30.234382838454977 22.592449380138504 35 21.50213497201783 27.174813680805993 30.067726129855448 21.255325217320724 36 24.69811086071896 26.840936599429043 27.93410690605109 20.52684563380091 37 21.18404048762212 29.031748948484477 28.955842172527085 20.82836839136632 38 20.896571756892392 29.52788615787332 27.95980999256339 21.6157320926709 39 20.83347894657929 29.04542719920155 27.77436447803382 22.34672937618534 40 22.781464767794784 27.10608422871388 28.564321034556748 21.54812996893459 41 20.206120716574997 26.817450592016485 29.752562699184832 23.22386599222369 42 21.614191410584635 27.080418719813437 28.377785769283232 22.927604100318696 43 20.77767619296705 26.703740738527838 29.31918010160235 23.199402966902767 44 21.10050545645713 27.572009038167206 29.066433084231345 22.26105242114432 45 19.77769836375805 29.39204309099907 27.99111214324285 22.83914640200003 46 21.239617775563204 28.880649371195034 28.005729834256428 21.874003018985334 47 20.735664422907462 27.191573295695598 29.70611677092575 22.36664551047119 48 20.987509577593823 26.9572768857479 30.14573725207701 21.909476284581267 49 21.132934935492393 26.213089860470568 30.385632726191858 22.26834247784518 50 20.044424252741006 28.21184303530905 30.329642084520316 21.414090627429626 51 19.94379140817967 28.46383850044285 28.894853708478145 22.69751638289933 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2607.0 1 3199.5 2 3792.0 3 24395.5 4 44999.0 5 30523.0 6 16047.0 7 16155.5 8 16264.0 9 17154.5 10 18045.0 11 18318.0 12 18591.0 13 18133.5 14 17676.0 15 17045.0 16 16414.0 17 15791.0 18 15168.0 19 14747.0 20 14326.0 21 15072.0 22 15818.0 23 16522.0 24 17226.0 25 19118.0 26 24129.5 27 27249.0 28 32206.0 29 37163.0 30 44307.0 31 51451.0 32 58642.5 33 65834.0 34 73556.0 35 81278.0 36 88777.0 37 96276.0 38 104298.5 39 112321.0 40 126992.0 41 141663.0 42 158364.5 43 175066.0 44 186047.5 45 197029.0 46 202344.5 47 207660.0 48 204672.0 49 201684.0 50 185381.0 51 169078.0 52 161598.5 53 154119.0 54 143977.0 55 133835.0 56 128649.0 57 123463.0 58 116846.5 59 110230.0 60 100491.0 61 90752.0 62 82168.0 63 73584.0 64 64937.0 65 56290.0 66 48531.5 67 40773.0 68 34730.5 69 28688.0 70 24020.5 71 19353.0 72 15798.5 73 12244.0 74 10018.5 75 5959.5 76 4126.0 77 3396.0 78 2666.0 79 1774.0 80 882.0 81 622.0 82 362.0 83 267.5 84 173.0 85 101.5 86 30.0 87 38.5 88 47.0 89 27.5 90 8.0 91 7.0 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2661159.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.879200879445946 #Duplication Level Percentage of deduplicated Percentage of total 1 77.58363669085627 16.19884335426341 2 7.504742763618164 3.1338606342030397 3 2.8225331709538533 1.7679671119573515 4 1.593124224574807 1.3305264284323581 5 1.0104897733290945 1.0549109481981982 6 0.7597353539862464 0.9517600242657489 7 0.5730305921279707 0.8375094590175429 8 0.43701868655608556 0.7299680755740907 9 0.3830183015518981 0.7197404452745655 >10 4.651356898749436 23.96868928431134 >50 2.047982018846961 30.496536715112022 >100 0.6280386108054796 16.722614721274137 >500 0.0036502855474776757 0.49299701996109724 >1k 0.0014601142189910703 0.4382365099754671 >5k 0.0 0.0 >10k+ 1.8251427737388378E-4 1.155839268179643 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30331 1.1397665453285581 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.515522372019109E-5 0.0 0.0 0.03750245663637535 0.0 2 7.515522372019109E-5 0.0 0.0 0.10747196991987326 0.0 3 7.515522372019109E-5 0.0 0.0 0.19104457869672575 0.0 4 7.515522372019109E-5 0.0 0.0 0.31749324260594725 0.0 5 7.515522372019109E-5 0.0 0.0 0.5816638539824189 0.0 6 7.515522372019109E-5 0.0 0.0 1.0852414305195592 0.0 7 7.515522372019109E-5 0.0 0.0 1.3556123478529467 0.0 8 7.515522372019109E-5 0.0 0.0 1.9399066346655724 0.0 9 7.515522372019109E-5 0.0 0.0 2.2310203937457325 0.0 10 7.515522372019109E-5 0.0 0.0 2.654444924185289 0.0 11 7.515522372019109E-5 0.0 0.0 3.037097745756642 0.0 12 7.515522372019109E-5 0.0 0.0 3.3404618063031934 0.0 13 7.515522372019109E-5 0.0 0.0 3.510087146239665 0.0 14 7.515522372019109E-5 0.0 0.0 3.6003109923157544 0.0 15 7.515522372019109E-5 0.0 0.0 3.6892571995886003 0.0 16 1.1273283558028663E-4 0.0 0.0 3.8443775813470746 0.0 17 1.1273283558028663E-4 0.0 0.0 4.023960988426471 0.0 18 1.1273283558028663E-4 0.0 0.0 4.2547626804711784 0.0 19 1.1273283558028663E-4 0.0 0.0 4.389779039884502 0.0 20 1.1273283558028663E-4 0.0 0.0 4.533475827637507 0.0 21 1.1273283558028663E-4 0.0 0.0 4.71952258395684 0.0 22 1.1273283558028663E-4 0.0 0.0 4.915264364136077 0.0 23 1.1273283558028663E-4 0.0 0.0 5.141669475593154 0.0 24 1.1273283558028663E-4 0.0 0.0 5.312384566273567 0.0 25 1.1273283558028663E-4 0.0 0.0 5.466978861466 0.0 26 1.1273283558028663E-4 0.0 0.0 5.607105776092297 0.0 27 1.1273283558028663E-4 0.0 0.0 5.763654107101455 0.0 28 1.1273283558028663E-4 0.0 0.0 5.92681609779799 0.0 29 1.1273283558028663E-4 0.0 0.0 6.1041824257776405 0.0 30 1.1273283558028663E-4 0.0 0.0 6.338215792442315 0.0 31 1.1273283558028663E-4 0.0 0.0 6.531552605462507 0.0 32 1.1273283558028663E-4 0.0 0.0 6.720192217000187 0.0 33 1.1273283558028663E-4 0.0 0.0 6.899211959901682 0.0 34 1.1273283558028663E-4 0.0 0.0 7.08713759681402 0.0 35 1.1273283558028663E-4 0.0 0.0 7.312603267974593 0.0 36 1.1273283558028663E-4 0.0 0.0 7.503009027269697 0.0 37 1.1273283558028663E-4 0.0 0.0 7.7162995521876 0.0 38 1.5031044744038218E-4 0.0 0.0 7.9487170815422905 0.0 39 1.5031044744038218E-4 0.0 0.0 8.29048546140986 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15420 0.0 42.47568 1 CGACGGT 315 0.0 42.142857 28 TCGTTAG 40 3.4605E-7 39.375 1 ACCGTTC 705 0.0 39.255318 45 ATAGGGC 1205 0.0 39.211617 4 ACGGGAT 1285 0.0 38.6965 5 TGATTCG 95 0.0 37.894737 15 CGGTCTA 345 0.0 37.826088 31 GGGCGAT 4470 0.0 37.802013 7 TATGGGA 2800 0.0 37.205357 4 TAGGGAC 2540 0.0 37.116142 5 TAAGGGA 2735 0.0 36.937843 4 CACGACG 355 0.0 36.760563 26 TACGGGA 975 0.0 36.69231 4 TAACGGG 645 0.0 36.627907 3 GACCGAT 1250 0.0 36.0 9 GTTTTTT 18955 0.0 35.907413 2 GTAGGGC 1330 0.0 35.86466 4 CGGGTAT 270 0.0 35.833336 6 AGGGATC 2650 0.0 35.745285 6 >>END_MODULE