##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547438_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2313827 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.283965050109625 31.0 31.0 33.0 30.0 34.0 2 31.68837039242778 31.0 31.0 34.0 30.0 34.0 3 31.739092421343514 31.0 31.0 34.0 30.0 34.0 4 35.55283216938864 37.0 35.0 37.0 33.0 37.0 5 35.46021591069687 37.0 35.0 37.0 33.0 37.0 6 35.51538295646131 37.0 35.0 37.0 33.0 37.0 7 35.91619382088635 37.0 35.0 37.0 35.0 37.0 8 35.95640253139064 37.0 35.0 37.0 35.0 37.0 9 37.70556139244637 39.0 37.0 39.0 35.0 39.0 10 37.05700728706165 39.0 37.0 39.0 33.0 39.0 11 36.74585265017652 39.0 37.0 39.0 32.0 39.0 12 36.39940496847863 38.0 35.0 39.0 32.0 39.0 13 36.29176857215341 39.0 35.0 39.0 32.0 39.0 14 37.462290395954405 40.0 36.0 41.0 32.0 41.0 15 37.59201012003058 40.0 36.0 41.0 32.0 41.0 16 37.62429516121992 40.0 36.0 41.0 32.0 41.0 17 37.55465685204641 39.0 36.0 41.0 32.0 41.0 18 37.38703757886826 39.0 36.0 41.0 32.0 41.0 19 37.25698420841316 39.0 36.0 41.0 32.0 41.0 20 37.05540690812234 39.0 35.0 41.0 32.0 41.0 21 36.99566302925845 39.0 35.0 41.0 32.0 41.0 22 36.900082417570545 38.0 35.0 41.0 31.0 41.0 23 36.802298961849786 38.0 35.0 40.0 31.0 41.0 24 36.68747274536947 38.0 35.0 40.0 31.0 41.0 25 36.56120963235367 38.0 35.0 40.0 31.0 41.0 26 36.41841460057299 38.0 35.0 40.0 31.0 41.0 27 36.31235135556807 38.0 35.0 40.0 31.0 41.0 28 36.197896817696396 38.0 35.0 40.0 30.0 41.0 29 36.17177645519739 38.0 35.0 40.0 30.0 41.0 30 36.0919787866595 38.0 35.0 40.0 30.0 41.0 31 35.95508566543653 38.0 35.0 40.0 30.0 41.0 32 35.746535069389374 38.0 35.0 40.0 29.0 41.0 33 35.536743671847546 38.0 34.0 40.0 27.0 41.0 34 35.34686387530269 38.0 34.0 40.0 26.0 41.0 35 35.16650769482766 38.0 34.0 40.0 25.0 41.0 36 35.077915073166665 38.0 34.0 40.0 25.0 41.0 37 35.009277703129925 38.0 34.0 40.0 25.0 41.0 38 34.898952255289615 38.0 34.0 40.0 24.0 41.0 39 34.82855978428811 38.0 34.0 40.0 24.0 41.0 40 34.741838953387614 37.0 34.0 40.0 24.0 41.0 41 34.65479571290334 37.0 34.0 40.0 23.0 41.0 42 34.575948417924074 37.0 34.0 40.0 23.0 41.0 43 34.52811035570075 37.0 33.0 40.0 23.0 41.0 44 34.38629681475754 37.0 33.0 40.0 23.0 41.0 45 34.2717039778687 37.0 33.0 40.0 23.0 41.0 46 34.224168876929866 37.0 33.0 40.0 23.0 41.0 47 34.18887280682609 36.0 33.0 40.0 23.0 41.0 48 34.10307036783649 36.0 33.0 40.0 23.0 41.0 49 34.02522444417841 36.0 33.0 40.0 23.0 41.0 50 33.92629181006186 36.0 33.0 40.0 23.0 41.0 51 33.39674184802926 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 2.0 12 8.0 13 3.0 14 22.0 15 46.0 16 162.0 17 403.0 18 904.0 19 1849.0 20 3267.0 21 5631.0 22 8741.0 23 13227.0 24 20335.0 25 30151.0 26 40888.0 27 46194.0 28 48779.0 29 52781.0 30 60560.0 31 72268.0 32 88378.0 33 112529.0 34 170466.0 35 244178.0 36 210994.0 37 232920.0 38 322161.0 39 525733.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.268122897692866 23.101683920189366 28.449274729701052 18.180918452416712 2 33.77218780833658 24.713602183741482 28.865122586952264 12.649087420969673 3 26.889175379144593 24.46993660286616 35.55036742159202 13.090520596397223 4 23.83224847838667 27.32447153568525 34.79901479237644 14.044265193551636 5 21.725003641153812 31.03537991388293 33.3095343774621 13.930082067501157 6 19.88506487304366 40.04171444105371 29.92125167525489 10.151969010647727 7 85.43240268179082 3.197170747856257 9.77233820851775 1.598088361835176 8 86.18016818024856 2.6345098401911637 9.42974561192345 1.75557636763682 9 81.14132992656754 5.376374292460067 11.02078936757156 2.461506413400829 10 39.55369178421723 33.28662860274342 16.05132968022242 11.10834993281693 11 28.274023943881716 23.667759084840828 30.76379521891654 17.29442175236092 12 27.963110465907782 22.458334179694507 31.516098653875158 18.062456700522553 13 21.253965832363438 28.94693509929653 32.37104589063919 17.42805317770084 14 17.36586183841748 31.31655910316545 32.199598327792 19.117980730625064 15 16.104834112489826 27.325768088971213 38.75566323670698 17.81373456183198 16 18.864331689447827 25.298390934153677 37.88368793345397 17.953589442944523 17 19.229570750103615 25.92324318110213 31.26257926802652 23.584606800767734 18 19.98744936419188 27.40165967464292 33.07183294170221 19.539058019462992 19 23.440213983154315 28.95142981735454 28.240227121560945 19.3681290779302 20 24.59652342201902 27.175497563128097 28.985918134761157 19.242060880091728 21 22.757319367437585 29.034884630527692 29.904310045651638 18.303485956383085 22 22.962995937034187 26.08077440534664 29.2019239122026 21.754305745416577 23 19.70060855889399 29.824572018564915 29.86601850527287 20.60880091726823 24 19.308833374318823 27.056301097705234 35.15863545545972 18.476230072516227 25 19.244610768220788 29.3937273616394 31.701376118439278 19.66028575170054 26 18.98625091677122 32.55053208385934 28.512719403827514 19.95049759554193 27 18.44143922600955 31.785911392684067 30.317521577888062 19.45512780341832 28 17.982545799664365 29.75200825299385 33.76821171159296 18.497234235748827 29 18.140811737437588 27.66766919047967 33.14556360523064 21.045955466852103 30 19.143349956587073 30.40443386649045 31.673024819919554 18.779191357002922 31 23.478678397304552 29.330412342841534 27.8888179626221 19.302091297231815 32 24.042938387355665 28.933364508236785 28.4991055943249 18.524591510082647 33 22.71418736145788 29.7759512703413 27.35252030510492 20.157341063095902 34 19.983213956791065 29.96797081199243 28.91503988846184 21.133775342754664 35 20.799523905633393 28.9213497811202 29.944373542187897 20.334752771058508 36 24.169222677408467 29.571052632716277 27.10837932135808 19.15134536851718 37 20.51652954175053 32.02776179895904 28.610133774046204 18.84557488524423 38 20.296763759779793 31.68119310562112 28.21892042922829 19.8031227053708 39 20.419504137517627 31.971059201919587 27.238985455697424 20.370451204865358 40 22.329413564626915 30.200961437479982 27.777789782900797 19.691835214992302 41 19.55349297938005 29.016127826324094 28.927011397135566 22.50336779716029 42 20.808383686420807 29.80339498156085 27.36436215845005 22.02385917356829 43 21.036966030736092 30.3033459286282 27.5309692556963 21.12871878493941 44 20.53545921972559 31.290930566546244 28.024999276091084 20.148610937637084 45 19.41908362206855 32.934398293390124 26.372585331574054 21.27393275296727 46 20.949880868362243 32.311966279242135 26.684881799719683 20.05327105267593 47 20.364703151964257 30.163188518415595 28.495172716024147 20.976935613596005 48 20.701331603443126 29.080436869307864 30.258528403376744 19.95970312387227 49 19.882947169343257 29.034322790770446 29.566471477772538 21.516258562113762 50 18.98076217452731 31.21382886447431 29.963130346391498 19.842278614606883 51 18.67062662852495 31.0620456931309 28.716840109480962 21.550487568863186 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2561.0 1 3009.0 2 3457.0 3 29996.0 4 56535.0 5 36563.0 6 16591.0 7 17498.5 8 18406.0 9 21403.5 10 24401.0 11 27356.0 12 30311.0 13 30217.5 14 30124.0 15 28011.5 16 25899.0 17 23278.0 18 20657.0 19 19158.0 20 17659.0 21 16985.0 22 16311.0 23 16483.0 24 16655.0 25 18558.5 26 23279.0 27 26096.0 28 32302.5 29 38509.0 30 40601.0 31 42693.0 32 48821.0 33 54949.0 34 63425.0 35 71901.0 36 76163.0 37 80425.0 38 89179.0 39 97933.0 40 110981.5 41 124030.0 42 136378.5 43 148727.0 44 153197.5 45 157668.0 46 159181.5 47 160695.0 48 169472.0 49 178249.0 50 173183.5 51 168118.0 52 158053.0 53 147988.0 54 133475.5 55 118963.0 56 107831.5 57 96700.0 58 90693.0 59 84686.0 60 76231.5 61 67777.0 62 58787.0 63 49797.0 64 42120.0 65 34443.0 66 29014.5 67 23586.0 68 18683.0 69 13780.0 70 12010.5 71 10241.0 72 8263.5 73 6286.0 74 5648.5 75 3580.0 76 2149.0 77 1816.0 78 1483.0 79 950.0 80 417.0 81 401.0 82 385.0 83 223.0 84 61.0 85 46.0 86 31.0 87 20.0 88 9.0 89 8.0 90 7.0 91 6.0 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2313827.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.646369123990482 #Duplication Level Percentage of deduplicated Percentage of total 1 76.26757681329678 15.74648543079623 2 7.65534646392338 3.161102177323948 3 3.1798337499319005 1.969560640620506 4 1.8818127846463912 1.5541040549621523 5 1.3077563041571931 1.350020968992749 6 0.9224233077397109 1.1426815260099805 7 0.677448041328231 0.9790789626510912 8 0.5073964545543888 0.8380715594347179 9 0.4175632997127523 0.7759049416650858 >10 4.6322437971334125 22.783716745768068 >50 1.8512127333597892 27.538498377644526 >100 0.694505827638312 19.069409399448983 >500 0.002758499717815488 0.407827314364103 >1k 0.0019097305738722608 0.8145155686601572 >5k 0.0 0.0 >10k+ 2.1219228598580678E-4 1.8690223316576822 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42662 1.843785209525172 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTT 3477 0.15027052584311618 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2579 0.1114603641499559 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCT 2436 0.10528012682019874 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04092786539356659 0.0 2 0.0 0.0 0.0 0.12701900358151236 0.0 3 0.0 0.0 0.0 0.24604259523291933 0.0 4 0.0 0.0 0.0 0.3778588459724949 0.0 5 0.0 0.0 0.0 0.6844072612170227 0.0 6 0.0 0.0 0.0 1.3269358512974392 0.0 7 0.0 0.0 0.0 1.736084849904509 0.0 8 0.0 0.0 0.0 2.4287468337088294 0.0 9 0.0 0.0 0.0 2.811835111268042 0.0 10 0.0 0.0 0.0 3.249854029709222 0.0 11 0.0 0.0 0.0 3.6209707985947093 0.0 12 0.0 0.0 0.0 3.9066014874923667 0.0 13 0.0 0.0 0.0 4.086822394241229 0.0 14 0.0 0.0 0.0 4.190762749332599 0.0 15 4.3218442865434624E-5 0.0 0.0 4.2749090575916 0.0 16 4.3218442865434624E-5 0.0 0.0 4.407416803417023 0.0 17 4.3218442865434624E-5 0.0 0.0 4.551118125944593 0.0 18 4.3218442865434624E-5 0.0 0.0 4.737389614694616 0.0 19 4.3218442865434624E-5 0.0 0.0 4.848201702201591 0.0 20 4.3218442865434624E-5 0.0 0.0 4.966015177452766 0.0 21 4.3218442865434624E-5 0.0 0.0 5.1129146647523775 0.0 22 4.3218442865434624E-5 0.0 0.0 5.263530938138417 0.0 23 4.3218442865434624E-5 0.0 0.0 5.435108156314193 0.0 24 4.3218442865434624E-5 0.0 0.0 5.575265566526797 0.0 25 8.643688573086925E-5 0.0 0.0 5.6873309888768695 0.0 26 8.643688573086925E-5 0.0 0.0 5.807002857171258 4.3218442865434624E-5 27 8.643688573086925E-5 0.0 0.0 5.931860938609498 4.3218442865434624E-5 28 8.643688573086925E-5 0.0 0.0 6.0546445347901985 4.3218442865434624E-5 29 8.643688573086925E-5 0.0 0.0 6.1913444695735675 4.3218442865434624E-5 30 8.643688573086925E-5 0.0 0.0 6.375584691508916 4.3218442865434624E-5 31 8.643688573086925E-5 0.0 0.0 6.516692907464559 4.3218442865434624E-5 32 8.643688573086925E-5 0.0 0.0 6.661950093935285 4.3218442865434624E-5 33 8.643688573086925E-5 0.0 0.0 6.806299693105837 4.3218442865434624E-5 34 8.643688573086925E-5 0.0 0.0 6.955403320991587 4.3218442865434624E-5 35 8.643688573086925E-5 0.0 0.0 7.124646743252629 4.3218442865434624E-5 36 8.643688573086925E-5 0.0 0.0 7.276429914596035 4.3218442865434624E-5 37 8.643688573086925E-5 0.0 0.0 7.433917920397679 4.3218442865434624E-5 38 8.643688573086925E-5 0.0 0.0 7.598191221729196 4.3218442865434624E-5 39 8.643688573086925E-5 0.0 0.0 7.765749124718486 4.3218442865434624E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTTA 20 7.0347707E-4 45.0 30 TATTCGA 20 7.0347707E-4 45.0 20 ATCGCGA 20 7.0347707E-4 45.0 24 CGGTCTA 295 0.0 43.474575 31 CGTTTTT 16045 0.0 43.471485 1 CGACGGT 310 0.0 39.919353 28 CGTTAGG 240 0.0 39.375004 2 ATAACGC 120 0.0 39.375004 11 TCACGAC 320 0.0 39.375 25 TAGGGAT 4220 0.0 39.348343 5 TAGGGAC 2600 0.0 39.115387 5 GTTAGCG 150 0.0 39.0 1 AGGGCGA 2115 0.0 38.723404 6 GTCTACG 105 0.0 38.57143 1 CAATCGT 35 6.2510353E-6 38.571426 28 TTAGGGA 3365 0.0 38.246655 4 CACGACG 325 0.0 38.076923 26 CGAGGGA 1335 0.0 37.92135 4 TAAGGGA 3195 0.0 37.887325 4 AGGGATT 3925 0.0 37.77707 6 >>END_MODULE