##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547437_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1524708 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226808674185484 31.0 31.0 33.0 30.0 34.0 2 31.629836663807104 31.0 31.0 34.0 30.0 34.0 3 31.792427140147492 31.0 31.0 34.0 30.0 34.0 4 35.53762425329965 37.0 35.0 37.0 33.0 37.0 5 35.410968526432605 37.0 35.0 37.0 33.0 37.0 6 35.45163664124541 37.0 35.0 37.0 33.0 37.0 7 35.85616918124651 37.0 35.0 37.0 35.0 37.0 8 35.88028002738885 37.0 35.0 37.0 35.0 37.0 9 37.58251612767822 39.0 37.0 39.0 35.0 39.0 10 36.92812197483059 39.0 37.0 39.0 32.0 39.0 11 36.65241541331193 39.0 35.0 39.0 32.0 39.0 12 36.135511848826134 38.0 35.0 39.0 32.0 39.0 13 35.93243624352991 38.0 35.0 39.0 31.0 39.0 14 37.021138473727426 39.0 35.0 41.0 31.0 41.0 15 37.17851024589626 39.0 35.0 41.0 32.0 41.0 16 37.2487217224544 39.0 35.0 41.0 32.0 41.0 17 37.16513981693544 39.0 35.0 41.0 32.0 41.0 18 37.09399045587745 39.0 35.0 41.0 32.0 41.0 19 37.03779608948074 39.0 35.0 41.0 31.0 41.0 20 36.93161969373808 39.0 35.0 41.0 31.0 41.0 21 36.84020743644029 38.0 35.0 41.0 31.0 41.0 22 36.74079561463572 38.0 35.0 41.0 31.0 41.0 23 36.65189662545222 38.0 35.0 40.0 31.0 41.0 24 36.57741613476154 38.0 35.0 40.0 31.0 41.0 25 36.45754006668818 38.0 35.0 40.0 30.0 41.0 26 36.29793442416515 38.0 35.0 40.0 30.0 41.0 27 36.197146601185274 38.0 35.0 40.0 30.0 41.0 28 36.095805229591505 38.0 35.0 40.0 30.0 41.0 29 36.17597336670366 38.0 35.0 40.0 30.0 41.0 30 36.142871290765186 38.0 35.0 40.0 30.0 41.0 31 36.07327370224331 38.0 35.0 40.0 30.0 41.0 32 36.00252769710659 38.0 35.0 40.0 30.0 41.0 33 35.94762406965793 38.0 35.0 40.0 30.0 41.0 34 35.84337984715762 38.0 35.0 40.0 29.0 41.0 35 35.761962290484476 38.0 35.0 40.0 29.0 41.0 36 35.71732423519782 38.0 35.0 40.0 29.0 41.0 37 35.66947244980678 38.0 34.0 40.0 28.0 41.0 38 35.56537841999911 38.0 34.0 40.0 28.0 41.0 39 35.491336045983886 38.0 34.0 40.0 27.0 41.0 40 35.3806302583839 38.0 34.0 40.0 27.0 41.0 41 35.30900801989627 38.0 34.0 40.0 27.0 41.0 42 35.27358484378648 38.0 34.0 40.0 27.0 41.0 43 35.23886868829966 38.0 34.0 40.0 27.0 41.0 44 35.131251360916316 37.0 34.0 40.0 27.0 41.0 45 34.9738297431377 37.0 34.0 40.0 26.0 41.0 46 34.912459303683065 37.0 34.0 40.0 26.0 41.0 47 34.877767415137846 37.0 34.0 40.0 26.0 41.0 48 34.82969198036608 37.0 34.0 40.0 26.0 41.0 49 34.758623290492345 37.0 34.0 40.0 26.0 41.0 50 34.63457265259971 36.0 33.0 40.0 26.0 41.0 51 34.08669200922406 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 4.0 14 16.0 15 42.0 16 98.0 17 268.0 18 606.0 19 1244.0 20 2060.0 21 3371.0 22 5244.0 23 7504.0 24 10920.0 25 15172.0 26 20236.0 27 24867.0 28 29021.0 29 33900.0 30 40641.0 31 49712.0 32 61465.0 33 77502.0 34 120496.0 35 166659.0 36 121652.0 37 152681.0 38 219049.0 39 360072.0 40 200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.26944175540497 23.41235174210406 28.01802049966289 13.300186002828083 2 30.713487434971153 26.196163462118648 28.828798694569713 14.261550408340481 3 29.623901756926575 26.11536110520834 30.421431513443885 13.8393056244212 4 26.684125747356212 28.234061866272096 29.65984306503278 15.421969321338905 5 24.040472011690106 32.58341925142388 28.108791978529656 15.267316758356353 6 21.89317561133017 41.61491905335317 25.898467116326536 10.593438218990128 7 88.49261629111935 4.0094234437020075 5.656296156378795 1.8416641087998489 8 88.73036673251534 3.5858669332095063 5.508267812591001 2.175498521684152 9 82.80024765397702 6.474551192752973 7.589453193660687 3.1357479596093154 10 40.31853968104057 35.60452230853383 12.969302974733523 11.10763503569208 11 35.5193912539319 23.071171660409732 24.731686329448 16.67775075621037 12 34.31516067338795 21.342643968550043 26.90784071441876 17.43435464364324 13 24.80396246363238 29.440784727305164 27.043538828418296 18.711713980644163 14 19.670717278324766 32.1435317450948 28.314667464196425 19.87108351238401 15 18.39506318586903 26.449064345435325 37.122124367419865 18.033748101275783 16 21.567014798899198 23.892115736259008 36.14403544809892 18.396834016742876 17 20.802999656327636 24.109140897798138 28.702413839240037 26.38544560663419 18 22.9561332399384 25.6960677060788 30.053033105355254 21.29476594862754 19 26.362555977931514 26.67966587700727 26.582532524260383 20.375245620800836 20 29.910317254189 24.82927878649551 25.859508837101924 19.400895122213566 21 26.005307245715247 27.319919617395595 26.806641009294896 19.86813212759427 22 25.01042822625709 24.80665150310748 26.497598228644435 23.685322041990993 23 22.396288338488418 29.005947368282975 26.811494397615803 21.7862698956128 24 22.6931976483366 25.06532398334632 32.022393796058005 20.21908457225908 25 21.581902895505237 26.689831757949715 29.83056427853727 21.897701068007777 26 21.39819558892588 30.135475120482084 26.991200938146847 21.47512835244519 27 21.211274552242134 30.242512008856774 27.442172534019626 21.10404090488146 28 18.631108382719837 29.352767874242154 31.69387187579523 20.322251867242777 29 20.39321627485394 26.178061635408223 31.06870299099893 22.360019098738906 30 21.007038724791894 27.72714513205151 29.940224620058398 21.325591523098193 31 26.037575719416438 26.124608777549536 26.129003061569822 21.7088124414642 32 26.061711488363677 27.65480341153847 26.414631522888314 19.86885357720954 33 25.09896976994939 27.483098403104066 25.940835884641515 21.47709594230502 34 21.196583214622077 27.885470529439075 28.87798844106544 22.039957814873407 35 21.919803660766522 26.634608069217187 28.634466402747282 22.81112186726901 36 24.954876605881257 27.771153558583023 26.370032819398865 20.90393701613686 37 22.04494237585164 30.487214601090834 27.048392216739202 20.419450806318324 38 21.75439493988357 30.51076009308012 25.801661695222954 21.933183271813355 39 21.796960467184537 28.816599637438777 26.879573006765884 22.5068668886108 40 23.65856281989732 26.43043782809561 27.776793982847863 22.13420536915921 41 19.120447980859286 26.705900408471656 28.639582136382835 25.534069474286227 42 22.198020866946326 26.81851213478253 25.929686208769155 25.05378078950199 43 21.698318628878447 26.968048964129526 26.888230402149134 24.445402004842894 44 21.73819511670431 28.06314389378163 27.314672711102716 22.88398827841134 45 21.02599317377491 29.763928568617732 25.45831726468281 23.75176099292455 46 21.83670578235308 29.893264808737147 26.118640421641388 22.15138898726838 47 22.07852257612605 27.873599403951445 27.138704591305352 22.90917342861715 48 22.013657697080358 25.671669591816926 29.24054966590324 23.074123045199475 49 21.430660821613056 25.717973539851563 29.40182644808055 23.44953919045483 50 19.91686276978936 28.953937409654834 28.523297575666945 22.605902244888856 51 19.05256613069519 29.551560036413534 27.081054208412365 24.31481962447892 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1474.0 1 1837.5 2 2201.0 3 6664.0 4 11127.0 5 7891.0 6 4655.0 7 4752.5 8 4850.0 9 5216.5 10 5583.0 11 5722.0 12 5861.0 13 5884.5 14 5908.0 15 5794.5 16 5681.0 17 5503.5 18 5326.0 19 5364.0 20 5402.0 21 5445.0 22 5488.0 23 6409.5 24 7331.0 25 8624.5 26 12050.0 27 14182.0 28 18768.0 29 23354.0 30 24967.5 31 26581.0 32 30475.5 33 34370.0 34 39541.0 35 44712.0 36 45596.5 37 46481.0 38 53336.5 39 60192.0 40 73372.5 41 86553.0 42 96622.0 43 106691.0 44 113379.5 45 120068.0 46 122709.5 47 125351.0 48 123771.0 49 122191.0 50 119005.5 51 115820.0 52 105999.0 53 96178.0 54 92527.5 55 88877.0 56 82211.5 57 75546.0 58 72284.0 59 69022.0 60 64337.0 61 59652.0 62 52397.5 63 45143.0 64 37193.5 65 29244.0 66 24471.0 67 19698.0 68 16075.0 69 12452.0 70 10525.0 71 8598.0 72 7021.5 73 5445.0 74 4497.5 75 2834.5 76 2119.0 77 1451.5 78 784.0 79 702.0 80 620.0 81 390.0 82 160.0 83 172.5 84 185.0 85 127.5 86 70.0 87 37.5 88 5.0 89 5.5 90 6.0 91 3.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1524708.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.436038576864647 #Duplication Level Percentage of deduplicated Percentage of total 1 77.29707632696247 15.023489573696935 2 7.3504061179944085 2.857255537299225 3 2.5729374964507365 1.5002313731063417 4 1.2999457420629015 1.0106318236226197 5 0.8132632720556423 0.7903308164410316 6 0.6082174392558489 0.7092802567499106 7 0.48071702529336086 0.6540264253710165 8 0.3679656858135903 0.5721436211548316 9 0.3437939686495466 0.6013793553449384 >10 5.996708985443424 30.11124255272094 >50 2.357480991674833 32.18335703006061 >100 0.5056862291158726 12.7017593203964 >500 0.004435844115049645 0.5615264727436766 >1k 0.0010236563342422257 0.29008111394600705 >5k 3.4121877808074194E-4 0.4332647273455108 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6533 0.42847548514207306 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2263 0.1484218617597599 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05063264572626365 0.0 2 0.0 0.0 0.0 0.1614735411632916 0.0 3 0.0 0.0 0.0 0.24227589807359837 0.0 4 0.0 0.0 0.0 0.425064996051703 0.0 5 0.0 0.0 0.0 0.7401417189389706 0.0 6 0.0 0.0 0.0 1.162714434501557 0.0 7 0.0 0.0 0.0 1.373574481146554 0.0 8 0.0 0.0 0.0 1.9367642853582456 0.0 9 0.0 0.0 0.0 2.14132804445179 0.0 10 0.0 0.0 0.0 2.516678603378483 0.0 11 0.0 0.0 0.0 2.9106556796448895 0.0 12 0.0 0.0 0.0 3.253541005884405 0.0 13 0.0 0.0 0.0 3.3993394144977267 0.0 14 0.0 0.0 0.0 3.463810775571454 0.0 15 0.0 0.0 0.0 3.5553692903821585 0.0 16 0.0 0.0 0.0 3.7335017590253345 0.0 17 0.0 0.0 0.0 3.9391804857061157 0.0 18 0.0 0.0 0.0 4.1906384697922485 0.0 19 0.0 0.0 0.0 4.326270997463121 0.0 20 0.0 0.0 0.0 4.481317078417638 0.0 21 0.0 0.0 0.0 4.675387024925429 0.0 22 0.0 0.0 0.0 4.887755557129627 0.0 23 0.0 0.0 0.0 5.106092445241974 0.0 24 0.0 0.0 0.0 5.271304407138941 0.0 25 0.0 0.0 0.0 5.42444848456229 0.0 26 0.0 0.0 0.0 5.570312479504272 0.0 27 0.0 0.0 0.0 5.710601636510073 0.0 28 0.0 0.0 0.0 5.8590890845984935 0.0 29 0.0 0.0 0.0 6.026858913313237 0.0 30 0.0 0.0 0.0 6.22447052156872 0.0 31 0.0 0.0 0.0 6.406406997274233 0.0 32 0.0 0.0 0.0 6.587425264378491 0.0 33 0.0 0.0 0.0 6.759130272812893 0.0 34 0.0 0.0 0.0 6.936541291840799 0.0 35 0.0 0.0 0.0 7.129693029747335 0.0 36 6.558632866096328E-5 0.0 0.0 7.330715127093188 0.0 37 6.558632866096328E-5 0.0 0.0 7.537574407689866 0.0 38 6.558632866096328E-5 0.0 0.0 7.7395147136369715 0.0 39 6.558632866096328E-5 0.0 0.0 7.931682656613594 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 45 3.8562575E-10 45.0 1 CGAACGT 20 7.034013E-4 45.0 37 ACGTTAG 45 3.8562575E-10 45.0 1 GCGCGAA 25 3.8914077E-5 45.0 34 CGACAGT 25 3.8914077E-5 45.0 12 TTAACGC 35 1.2122837E-7 45.0 36 CACCGTA 20 7.034013E-4 45.0 17 CCGTTAG 45 3.8562575E-10 45.0 1 TCACGAC 215 0.0 41.860466 25 TACGGGA 510 0.0 41.47059 4 CGAGGGA 935 0.0 40.18717 4 TTGGGAC 1165 0.0 40.171673 5 TCGTACA 45 1.9290383E-8 40.0 34 ATACCGG 90 0.0 40.0 2 CACGACG 220 0.0 38.863636 26 GCTACGA 180 0.0 38.75 10 CGTTTTT 3360 0.0 38.70536 1 CGGTTAT 35 6.249633E-6 38.571426 22 CGGTCTA 235 0.0 38.29787 31 ATAGGGA 2110 0.0 38.28199 4 >>END_MODULE