##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547436_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2289014 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226365587978055 31.0 31.0 33.0 30.0 34.0 2 31.62496428593272 31.0 31.0 34.0 30.0 34.0 3 31.570137185705285 31.0 31.0 34.0 30.0 34.0 4 35.44072775439556 37.0 35.0 37.0 33.0 37.0 5 35.35462823731091 37.0 35.0 37.0 33.0 37.0 6 35.41940722075094 37.0 35.0 37.0 33.0 37.0 7 35.907819698787335 37.0 35.0 37.0 35.0 37.0 8 35.959608372862725 37.0 35.0 37.0 35.0 37.0 9 37.68560262191494 39.0 37.0 39.0 35.0 39.0 10 36.98128014944426 39.0 37.0 39.0 32.0 39.0 11 36.6664480863813 39.0 35.0 39.0 32.0 39.0 12 36.42722368670528 39.0 35.0 39.0 32.0 39.0 13 36.372469106785715 39.0 35.0 39.0 32.0 39.0 14 37.53477348762393 40.0 36.0 41.0 32.0 41.0 15 37.643222802481766 40.0 36.0 41.0 32.0 41.0 16 37.64624550133813 40.0 36.0 41.0 32.0 41.0 17 37.57359981197144 40.0 36.0 41.0 32.0 41.0 18 37.352656209180026 39.0 36.0 41.0 32.0 41.0 19 37.172907199344344 38.0 36.0 41.0 32.0 41.0 20 36.9281896047818 38.0 35.0 41.0 32.0 41.0 21 36.87626069565324 38.0 35.0 41.0 31.0 41.0 22 36.78914370991178 38.0 35.0 41.0 31.0 41.0 23 36.70459770014513 38.0 35.0 40.0 31.0 41.0 24 36.59027729843505 38.0 35.0 40.0 31.0 41.0 25 36.47644531662978 38.0 35.0 40.0 31.0 41.0 26 36.31876694506892 38.0 35.0 40.0 31.0 41.0 27 36.21783309320083 38.0 35.0 40.0 30.0 41.0 28 36.092055793455174 38.0 35.0 40.0 30.0 41.0 29 36.038281985169164 38.0 35.0 40.0 30.0 41.0 30 35.89398928971164 38.0 35.0 40.0 30.0 41.0 31 35.6564730490945 38.0 35.0 40.0 29.0 41.0 32 35.349672828562866 38.0 34.0 40.0 27.0 41.0 33 35.009964989292335 38.0 34.0 40.0 24.0 41.0 34 34.692881738600114 38.0 34.0 40.0 23.0 41.0 35 34.44047000149409 38.0 33.0 40.0 21.0 41.0 36 34.35181829381559 38.0 33.0 40.0 21.0 41.0 37 34.28700348709095 38.0 33.0 40.0 21.0 41.0 38 34.1831522218737 38.0 33.0 40.0 20.0 41.0 39 34.093417515139706 38.0 33.0 40.0 19.0 41.0 40 34.01780417245155 37.0 33.0 40.0 18.0 41.0 41 33.91132382763932 37.0 33.0 40.0 18.0 41.0 42 33.85152297015222 37.0 33.0 40.0 18.0 41.0 43 33.80657610656816 37.0 33.0 40.0 18.0 41.0 44 33.67350177849502 37.0 33.0 40.0 18.0 41.0 45 33.559351318952174 37.0 33.0 40.0 18.0 41.0 46 33.526827708349536 37.0 33.0 40.0 18.0 41.0 47 33.471714895583865 37.0 33.0 40.0 18.0 41.0 48 33.374088581371716 36.0 33.0 40.0 18.0 41.0 49 33.27842686851194 36.0 32.0 40.0 18.0 41.0 50 33.18713603324401 36.0 32.0 40.0 18.0 41.0 51 32.70196294124894 35.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 0.0 11 2.0 12 1.0 13 8.0 14 26.0 15 48.0 16 206.0 17 537.0 18 1311.0 19 2544.0 20 4513.0 21 7255.0 22 11167.0 23 17350.0 24 26551.0 25 41149.0 26 55191.0 27 58667.0 28 57438.0 29 57788.0 30 62846.0 31 73178.0 32 86805.0 33 107343.0 34 153865.0 35 215917.0 36 199780.0 37 221134.0 38 302961.0 39 523132.0 40 298.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.82786474875208 23.09396098057941 25.81395308198202 21.264221188686484 2 36.986449187291996 23.65258578584491 27.05662787558311 12.304337151279983 3 25.842568022738178 23.814052688188013 37.982467560268304 12.360911728805503 4 22.96892897990139 26.03981452275958 37.79011399668154 13.20114250065749 5 20.86994662330593 30.313881872282128 36.045825844664996 12.770345659746948 6 18.984593366401427 38.56852775911375 32.8818434487513 9.565035425733527 7 81.53938770142952 2.8218700278810003 13.933379175487786 1.7053630952016896 8 82.09622134246447 2.275958119959074 13.64644340314214 1.9813771344343023 9 76.76527972305979 5.319888825494296 15.287411959909376 2.6274194915365303 10 34.660556903540126 32.910633137237255 21.698600358058098 10.730209601164518 11 24.255946009941397 25.58210653145852 33.95671673480372 16.20523072379636 12 23.469537538870448 23.673948695814005 35.215293571817384 17.64122019349816 13 19.73360582329335 27.655706780299287 36.28772038965249 16.322967006754872 14 16.519296081194785 30.94843456614944 35.59855903022 16.933710322435775 15 15.739484336924109 28.184711845362237 40.279744903264024 15.79605891444963 16 18.045368005612897 27.116173164515377 39.28010051489419 15.558358314977541 17 18.273894349270034 27.242209964639798 34.19380571722147 20.290089968868692 18 19.096082418019286 27.899217741787513 35.894450623718335 17.110249216474866 19 20.66671501353858 29.942499259506494 32.343795188670754 17.04699053828417 20 21.967362366503657 28.72808991120194 32.29342415555344 17.011123566740963 21 19.827095858740925 29.641452607978806 33.709230262462356 16.822221270817916 22 19.845007501046304 27.082577913459684 33.637277884713676 19.435136700780337 23 17.16730435025736 30.574736545953847 33.30617462365892 18.95178448012987 24 17.15489726144095 29.405892668196877 36.69475153930907 16.74445853105311 25 18.33614822801433 29.809734671784444 34.347015789331124 17.507101310870095 26 17.591853959827244 32.4447993765001 32.51963509179062 17.44371157188204 27 17.520600572997804 31.297187347914868 33.516614577280876 17.665597501806456 28 16.691029412664143 30.56106253609633 35.95478227743474 16.79312577380479 29 17.52890109016371 28.570074276522554 35.11590580048877 18.785118832824963 30 18.50726994242936 30.070589345456167 33.961565984305906 17.460574727808567 31 20.165407463650286 29.361725179487763 32.61146502380501 17.86140233305694 32 20.58790378739492 29.89986081343321 31.763632725706355 17.74860267346552 33 19.49857012670084 31.1477343519961 31.25865547349208 18.09504004781098 34 17.698886944334983 31.475997962441472 31.5398682576865 19.28524683553705 35 17.79683304689268 31.75581276479742 31.45677571216253 18.99057847614737 36 19.734916431266914 31.73213444740836 29.785794232800672 18.747154888524054 37 17.952970143476623 32.99757013281701 30.56193627474537 18.487523448960992 38 18.059828380254555 32.66026332735405 29.701653200897855 19.578255091493542 39 17.875775333833694 32.11998703371845 29.599775274419464 20.40446235802839 40 19.87742320492579 30.87530264122456 30.072424196619156 19.174849957230496 41 17.44165828605679 30.715714276976897 30.561018849163872 21.281608587802435 42 19.211896475949906 31.58499685890956 28.93748137844504 20.265625286695492 43 19.080267748471613 31.53322784395377 29.67447992891262 19.71202447866199 44 19.350558799552996 32.603208193571554 29.413013638186573 18.633219368688877 45 18.05764403363195 33.71805502281768 28.212627795199158 20.01167314835121 46 19.28673219124042 32.67808759579452 28.36937650883743 19.66580370412763 47 19.21687678624945 31.45266914051203 29.47203468392941 19.85841938930911 48 19.14086152378273 30.58037216024017 30.19706301490511 20.08170330107199 49 18.802768353535626 30.515191257021584 30.280461368956242 20.401579020486547 50 17.672936906458414 31.667652535109003 31.07766051234287 19.581750046089713 51 17.348124563676762 32.31854414171342 29.808904620067857 20.524426674541964 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2172.0 1 2495.5 2 2819.0 3 40346.5 4 77874.0 5 50618.5 6 23363.0 7 23753.0 8 24143.0 9 27330.0 10 30517.0 11 33925.5 12 37334.0 13 38300.0 14 39266.0 15 37481.5 16 35697.0 17 32959.0 18 30221.0 19 28164.0 20 26107.0 21 24598.5 22 23090.0 23 23028.5 24 22967.0 25 24527.0 26 28902.5 27 31718.0 28 36596.5 29 41475.0 30 46121.5 31 50768.0 32 56866.5 33 62965.0 34 70332.0 35 77699.0 36 85804.5 37 93910.0 38 99568.0 39 105226.0 40 115412.5 41 125599.0 42 136866.5 43 148134.0 44 155161.0 45 162188.0 46 175066.5 47 187945.0 48 186276.5 49 184608.0 50 172249.0 51 159890.0 52 141185.0 53 122480.0 54 109557.0 55 96634.0 56 86013.5 57 75393.0 58 65585.0 59 55777.0 60 48829.5 61 41882.0 62 34510.5 63 27139.0 64 21856.5 65 16574.0 66 12509.5 67 8445.0 68 6558.5 69 4672.0 70 3646.5 71 2621.0 72 2085.5 73 1550.0 74 1197.0 75 698.0 76 552.0 77 476.5 78 401.0 79 265.0 80 129.0 81 93.0 82 57.0 83 46.0 84 35.0 85 28.5 86 22.0 87 17.0 88 12.0 89 10.5 90 9.0 91 5.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2289014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.829362450634147 #Duplication Level Percentage of deduplicated Percentage of total 1 74.25350659865492 19.92174241765867 2 8.051956715362914 4.320577303065785 3 3.642228631866288 2.931560162772539 4 2.336506755514366 2.5074794644820066 5 1.5965893604721755 2.1417737318467087 6 1.1439249453583442 1.8414466185204525 7 0.8875004150248167 1.6667749216852328 8 0.6950346343712241 1.4917868897031643 9 0.5540859181066675 1.3379194733108555 >10 5.6849547790005905 34.19477597804186 >50 1.0114299176635522 18.42043719900924 >100 0.1389726485864465 5.045598819694027 >500 0.0011580380062331517 0.2072774256313113 >1k 0.0018197740097949527 1.0402042285000883 >5k 1.6543400089045026E-4 0.2872589932946139 >10k+ 1.6543400089045026E-4 2.643386372783378 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59556 2.6018189491195773 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTT 6472 0.2827418268302422 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCT 4618 0.2017462540639769 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTC 4083 0.17837374520208266 No Hit CGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTG 3202 0.13988555771174838 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06810792769288436 0.0 2 0.0 0.0 0.0 0.1998240290360828 0.0 3 0.0 0.0 0.0 0.4280445641660558 0.0 4 0.0 0.0 0.0 0.6280433409319471 0.0 5 0.0 0.0 0.0 1.1135799082050175 0.0 6 0.0 0.0 0.0 2.1038752930300992 0.0 7 0.0 0.0 0.0 2.755946446810723 0.0 8 0.0 0.0 0.0 3.6859538648518533 0.0 9 0.0 0.0 0.0 4.236933456938227 0.0 10 0.0 0.0 0.0 4.7912332558909645 0.0 11 0.0 0.0 0.0 5.215083874541615 0.0 12 0.0 0.0 0.0 5.563093978455353 0.0 13 0.0 0.0 0.0 5.80979408601258 0.0 14 0.0 0.0 0.0 5.964576887690508 0.0 15 0.0 0.0 0.0 6.08738085481347 0.0 16 0.0 0.0 0.0 6.256886152727768 0.0 17 0.0 0.0 0.0 6.45076875895036 0.0 18 0.0 0.0 0.0 6.710924441702847 0.0 19 0.0 0.0 0.0 6.8643529484747585 0.0 20 0.0 0.0 0.0 7.027523641183496 0.0 21 0.0 0.0 0.0 7.206203194912744 0.0 22 0.0 0.0 0.0 7.395760794822574 0.0 23 0.0 0.0 0.0 7.608603529729394 0.0 24 0.0 0.0 0.0 7.7852297976333915 0.0 25 0.0 0.0 0.0 7.9417163896769525 0.0 26 0.0 0.0 0.0 8.09916409423446 0.0 27 0.0 0.0 0.0 8.262946403997528 0.0 28 0.0 0.0 0.0 8.43004892062696 0.0 29 0.0 0.0 0.0 8.61161181189805 0.0 30 0.0 0.0 0.0 8.85140938412784 0.0 31 0.0 0.0 0.0 9.046602598323995 0.0 32 0.0 0.0 0.0 9.24052889147904 0.0 33 0.0 0.0 0.0 9.431003916970363 0.0 34 0.0 0.0 0.0 9.623007985097514 0.0 35 0.0 0.0 0.0 9.835195416017552 0.0 36 0.0 0.0 0.0 10.040349250812795 0.0 37 0.0 0.0 0.0 10.247512684500837 0.0 38 0.0 0.0 0.0 10.473286751413491 0.0 39 4.368693245213878E-5 0.0 0.0 10.742835124643188 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTAG 40 6.8193913E-9 45.0 1 TACCGCG 25 3.8920225E-5 45.0 1 CGTTTTT 25160 0.0 44.19515 1 GGCGTAG 120 0.0 39.375004 1 CAGCGCG 40 3.4602272E-7 39.375 1 CTATACG 40 3.4602272E-7 39.375 1 CGCGCCT 40 3.4602272E-7 39.375 17 GTTTTTT 28365 0.0 39.3284 2 CTTAACG 75 0.0 39.0 1 CGCCGAC 75 0.0 39.0 13 GGCGATA 955 0.0 38.638744 8 ACGGGTA 210 0.0 38.57143 5 GCGATAT 210 0.0 38.57143 9 GACCGAT 1080 0.0 38.541668 9 GGGCGAT 3960 0.0 38.238636 7 TGGGCGA 1145 0.0 38.122272 6 AGGGCGA 2030 0.0 37.906403 6 TCGCAAG 95 0.0 37.894737 1 CTAAGCG 95 0.0 37.894737 1 GCGATAA 275 0.0 37.636364 9 >>END_MODULE