##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547433_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1033513 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.278847968046847 31.0 31.0 33.0 30.0 34.0 2 31.69276922496379 31.0 31.0 34.0 30.0 34.0 3 31.80928638536719 31.0 31.0 34.0 30.0 34.0 4 35.590934027922245 37.0 35.0 37.0 33.0 37.0 5 35.47769500722294 37.0 35.0 37.0 33.0 37.0 6 35.524632007531594 37.0 35.0 37.0 33.0 37.0 7 35.89603033537072 37.0 35.0 37.0 35.0 37.0 8 35.93150158730466 37.0 35.0 37.0 35.0 37.0 9 37.683909152569925 39.0 37.0 39.0 35.0 39.0 10 37.001716475748246 39.0 37.0 39.0 33.0 39.0 11 36.712746719199465 39.0 35.0 39.0 32.0 39.0 12 36.330632512605064 38.0 35.0 39.0 32.0 39.0 13 36.19729601853097 38.0 35.0 39.0 32.0 39.0 14 37.257181090126586 39.0 35.0 41.0 32.0 41.0 15 37.402636444824594 39.0 35.0 41.0 32.0 41.0 16 37.46517460351249 39.0 35.0 41.0 32.0 41.0 17 37.39578312028973 39.0 35.0 41.0 32.0 41.0 18 37.289875405534325 39.0 36.0 41.0 32.0 41.0 19 37.18587671369397 39.0 35.0 41.0 32.0 41.0 20 37.03250370338834 39.0 35.0 41.0 32.0 41.0 21 36.96917116669069 39.0 35.0 41.0 31.0 41.0 22 36.90134328257119 39.0 35.0 41.0 31.0 41.0 23 36.82035929881869 38.0 35.0 41.0 31.0 41.0 24 36.718495074566064 38.0 35.0 40.0 31.0 41.0 25 36.58552045305671 38.0 35.0 40.0 31.0 41.0 26 36.44553285735158 38.0 35.0 40.0 31.0 41.0 27 36.35471638963419 38.0 35.0 40.0 30.0 41.0 28 36.23235798678875 38.0 35.0 40.0 30.0 41.0 29 36.2484680889355 38.0 35.0 40.0 30.0 41.0 30 36.1610390967506 38.0 35.0 40.0 30.0 41.0 31 36.04522342728151 38.0 35.0 40.0 30.0 41.0 32 35.959167422180464 38.0 35.0 40.0 30.0 41.0 33 35.84897722621776 38.0 35.0 40.0 29.0 41.0 34 35.66780292071798 38.0 35.0 40.0 28.0 41.0 35 35.548338530816736 38.0 34.0 40.0 27.0 41.0 36 35.449235761911076 38.0 34.0 40.0 27.0 41.0 37 35.406571567072696 38.0 34.0 40.0 27.0 41.0 38 35.30006105390063 38.0 34.0 40.0 26.0 41.0 39 35.21330162271786 38.0 34.0 40.0 26.0 41.0 40 35.10726909095483 38.0 34.0 40.0 25.0 41.0 41 35.007094250386785 38.0 34.0 40.0 25.0 41.0 42 34.9548975194313 38.0 34.0 40.0 25.0 41.0 43 34.9275055079133 38.0 34.0 40.0 25.0 41.0 44 34.79712301635296 37.0 34.0 40.0 24.0 41.0 45 34.67782698427596 37.0 34.0 40.0 24.0 41.0 46 34.65857130002235 37.0 34.0 40.0 24.0 41.0 47 34.60161991189274 37.0 33.0 40.0 24.0 41.0 48 34.50817164370453 37.0 33.0 40.0 24.0 41.0 49 34.411733572775574 37.0 33.0 40.0 24.0 41.0 50 34.32209851254895 36.0 33.0 40.0 24.0 41.0 51 33.76730916785759 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 0.0 13 5.0 14 9.0 15 28.0 16 69.0 17 213.0 18 468.0 19 937.0 20 1550.0 21 2454.0 22 3860.0 23 5880.0 24 8437.0 25 12502.0 26 16243.0 27 18222.0 28 20189.0 29 22731.0 30 26741.0 31 32515.0 32 39819.0 33 51003.0 34 78132.0 35 101530.0 36 84579.0 37 104834.0 38 150086.0 39 250338.0 40 136.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.992062992918328 24.058333083376795 28.765288873966753 16.184315049738128 2 32.74240382075504 25.4137103258498 29.15222159759964 12.691664255795523 3 28.531523067440855 25.614578626490424 32.4487452020439 13.405153104024818 4 25.415161686403557 27.783395080661784 32.286870121614335 14.514573111320322 5 22.98364897200132 31.48039744057404 31.03899031748996 14.496963269934678 6 21.231469754129847 40.43587260150574 27.83874029644523 10.493917347919185 7 87.57528932872638 3.2166987739873614 7.65873288483067 1.5492790124555762 8 88.21156579549556 2.636735096704154 7.351431476914175 1.8002676308861136 9 83.0984225645928 5.180002573746049 9.040428132011884 2.681146729649264 10 40.12731334777598 32.0174008454659 15.899461351719815 11.955824455038302 11 30.94078158668541 24.212274059445793 28.019966850924956 16.826977502943844 12 30.504212332113866 21.98443560942146 29.458458674443378 18.052893384021296 13 23.76699664155168 27.175855552857097 30.097347590209317 18.959800215381904 14 19.40517439064627 29.660004276675767 31.14552018213607 19.789301150541892 15 18.54625921493005 26.04553595358742 36.95280078721797 18.45540404426456 16 21.958407876823998 23.86104480543544 34.92766902786902 19.252878289871536 17 21.587536876652738 24.536508007156176 30.204554756447184 23.671400359743902 18 22.961394776843637 25.46847499741174 31.692586353534015 19.877543872210605 19 25.177235312956874 27.46699847994171 27.528923196902216 19.826843010199195 20 25.94761749489363 26.952152512837284 27.952817235970905 19.14741275629818 21 23.77841401124127 27.091096096517415 30.060966818995023 19.069523073246298 22 23.445955687059573 24.251654309137862 29.938471988257525 22.36391801554504 23 21.34622399524728 27.55669256216419 29.340704954848174 21.756378487740356 24 21.018216510097115 26.454529357637497 33.44999046939903 19.077263662866358 25 21.83639683293776 28.019676578814202 29.77727420941972 20.366652378828327 26 20.139853102960487 29.808043053159466 28.25489374589386 21.797210097986188 27 19.486547339027183 29.157156223482435 30.13479269249637 21.221503744994017 28 18.87910456859275 28.3155606170411 31.690167419277742 21.115167395088402 29 20.313435825190396 26.043891078293164 31.4810747421658 22.161598354350648 30 21.024408981793165 27.472126620565007 31.219249298267172 20.28421509937466 31 23.83995169872077 27.381948751491276 28.075312066708403 20.702787483079554 32 25.19649002963678 26.272044957344516 27.926112201781688 20.60535281123701 33 23.801248750620456 27.285191381240487 27.2006254396413 21.712934428497753 34 20.26854040539403 27.242618138330144 30.318825210713364 22.170016245562465 35 21.261174266796836 27.3852385020798 29.258267675394507 22.09531955572886 36 24.092681949815823 28.321075787145393 27.06100455436942 20.525237708669366 37 21.394022136151168 29.667454594185077 28.394321116425242 20.544202153238516 38 22.16450107545817 28.84288828490788 28.194226874746615 20.798383764887333 39 21.216472361740973 28.775641912583588 27.766752812978645 22.24113291269679 40 23.110981671251356 27.02936489429741 29.028952707900142 20.830700726551093 41 20.342076006784627 26.76328212610775 29.64587770061915 23.248764166488474 42 21.191121930735267 27.889924945307897 27.725147143770805 23.193805980186024 43 20.992962836461658 27.3854320168203 28.96025497502209 22.661350171695954 44 21.679940165242236 27.938884174654792 28.229833586998904 22.151342073104065 45 20.111309678736504 29.600595251341783 27.255293353832993 23.03280171608872 46 21.412599551239317 28.857111618334745 27.870573471257735 21.8597153591682 47 21.161127145957526 28.111886352663195 29.031565156896917 21.695421344482362 48 20.945454967668525 27.33976253806193 29.910025321403793 21.80475717286575 49 21.418792022935367 27.42597335495538 29.583082167326392 21.572152454782863 50 20.33539974823732 28.395869234349252 29.67635627224815 21.592374745165277 51 19.39356350621618 29.413853526757766 28.66166173042816 22.530921236597894 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1282.0 1 1428.0 2 1574.0 3 8113.5 4 14653.0 5 9899.0 6 5145.0 7 5243.5 8 5342.0 9 5901.5 10 6461.0 11 6586.0 12 6711.0 13 6720.0 14 6729.0 15 6486.0 16 6243.0 17 5955.0 18 5667.0 19 5415.0 20 5163.0 21 5435.5 22 5708.0 23 5868.0 24 6028.0 25 6954.0 26 9563.0 27 11246.0 28 13116.5 29 14987.0 30 17181.5 31 19376.0 32 22723.0 33 26070.0 34 30448.5 35 34827.0 36 36053.0 37 37279.0 38 40659.0 39 44039.0 40 49677.0 41 55315.0 42 61307.0 43 67299.0 44 69670.5 45 72042.0 46 74971.5 47 77901.0 48 80341.5 49 82782.0 50 79981.0 51 77180.0 52 70275.0 53 63370.0 54 58190.0 55 53010.0 56 50725.0 57 48440.0 58 44836.5 59 41233.0 60 38072.0 61 34911.0 62 30609.0 63 26307.0 64 23181.5 65 20056.0 66 16795.0 67 13534.0 68 12153.5 69 10773.0 70 8635.5 71 6498.0 72 5463.0 73 4428.0 74 3507.5 75 2127.5 76 1668.0 77 1259.0 78 850.0 79 657.5 80 465.0 81 371.5 82 278.0 83 188.0 84 98.0 85 76.5 86 55.0 87 34.5 88 14.0 89 10.0 90 6.0 91 3.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1033513.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.199812167118466 #Duplication Level Percentage of deduplicated Percentage of total 1 73.18871475229643 17.71153149758386 2 7.016186460272506 3.395807889361488 3 3.016701678764734 2.1901084197101253 4 1.8359347479524142 1.7771710420613758 5 1.3236575788745608 1.6016132391173583 6 1.0233333101253466 1.4858684333633387 7 0.8240066387563009 1.3958564117652783 8 0.7348061129449183 1.4225735930013967 9 0.5987531706378445 1.3040742837512223 >10 9.772016022977098 55.690292418843526 >50 0.6290754648766457 9.220061348408223 >100 0.03438676076154919 1.4827990155401 >500 0.0020227506330323026 0.3434345006281967 >1k 0.0 0.0 >5k 4.0455012660646055E-4 0.9788079068645128 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9998 0.9673801877673527 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9351474050157086E-4 0.0 0.0 0.024479614673448714 0.0 2 1.9351474050157086E-4 0.0 0.0 0.09046814118448437 0.0 3 1.9351474050157086E-4 0.0 0.0 0.16942215530912527 0.0 4 1.9351474050157086E-4 0.0 0.0 0.28330558009429974 0.0 5 1.9351474050157086E-4 0.0 0.0 0.524424946759257 0.0 6 1.9351474050157086E-4 0.0 0.0 0.9951495530293282 0.0 7 1.9351474050157086E-4 0.0 0.0 1.2453641124978592 0.0 8 1.9351474050157086E-4 0.0 0.0 1.7722079935133859 0.0 9 1.9351474050157086E-4 0.0 0.0 2.0718655691800683 0.0 10 1.9351474050157086E-4 0.0 0.0 2.4754405604960943 0.0 11 1.9351474050157086E-4 0.0 0.0 2.8297660503544706 0.0 12 1.9351474050157086E-4 0.0 0.0 3.1076532177147262 0.0 13 1.9351474050157086E-4 0.0 0.0 3.271463445549306 0.0 14 1.9351474050157086E-4 0.0 0.0 3.3741230153853894 0.0 15 1.9351474050157086E-4 0.0 0.0 3.450464580513259 0.0 16 1.9351474050157086E-4 0.0 0.0 3.572862653880503 0.0 17 1.9351474050157086E-4 0.0 0.0 3.7079359427505993 0.0 18 1.9351474050157086E-4 0.0 0.0 3.8867435629740505 0.0 19 1.9351474050157086E-4 0.0 0.0 3.9923058539176575 0.0 20 1.9351474050157086E-4 0.0 0.0 4.110156330883115 0.0 21 1.9351474050157086E-4 0.0 0.0 4.250938304598007 0.0 22 1.9351474050157086E-4 0.0 0.0 4.405169552777759 0.0 23 1.9351474050157086E-4 0.0 0.0 4.578268488156414 0.0 24 1.9351474050157086E-4 0.0 0.0 4.711309872251244 0.0 25 1.9351474050157086E-4 0.0 0.0 4.831192253991968 0.0 26 1.9351474050157086E-4 0.0 0.0 4.9443016198151355 0.0 27 1.9351474050157086E-4 0.0 0.0 5.068344568476642 0.0 28 1.9351474050157086E-4 0.0 0.0 5.193935635062162 0.0 29 1.9351474050157086E-4 0.0 0.0 5.340232778881349 0.0 30 1.9351474050157086E-4 0.0 0.0 5.532683188310162 0.0 31 1.9351474050157086E-4 0.0 0.0 5.684979289084898 0.0 32 1.9351474050157086E-4 0.0 0.0 5.842210015742424 0.0 33 1.9351474050157086E-4 0.0 0.0 5.998086139216439 0.0 34 1.9351474050157086E-4 0.0 0.0 6.173313736740612 0.0 35 1.9351474050157086E-4 0.0 0.0 6.367118749352935 0.0 36 1.9351474050157086E-4 0.0 0.0 6.533734940924788 0.0 37 1.9351474050157086E-4 0.0 0.0 6.7066403615629415 0.0 38 1.9351474050157086E-4 0.0 0.0 6.918539002412161 0.0 39 1.9351474050157086E-4 0.0 0.0 7.248868664448342 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAC 20 7.032955E-4 45.000004 24 CGTTAAT 20 7.032955E-4 45.000004 23 GTATACG 20 7.032955E-4 45.000004 1 GTACGTT 20 7.032955E-4 45.000004 9 TCGTTAG 25 3.8905317E-5 45.0 1 TAGGACG 45 3.8562575E-10 45.0 1 CGCGTAA 30 2.1652886E-6 44.999996 31 AATCGCG 30 2.1652886E-6 44.999996 1 CGGTCTA 200 0.0 42.75 31 CGTTTTT 4965 0.0 41.737164 1 GCGTAAG 65 0.0 41.53846 1 CGACGGT 220 0.0 40.909092 28 CGATCGT 40 3.4577715E-7 39.375004 10 AGGGCGA 1015 0.0 39.01478 6 TCACGAC 225 0.0 39.0 25 TACGGGA 370 0.0 38.91892 4 TATTGCG 70 0.0 38.571426 1 TGCGCGA 35 6.2476793E-6 38.571426 38 ACGTAGG 70 0.0 38.571426 2 GCGTAAC 35 6.2476793E-6 38.571426 32 >>END_MODULE