##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547432_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2366533 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27743327475256 31.0 31.0 33.0 30.0 34.0 2 31.679743320714312 31.0 31.0 34.0 30.0 34.0 3 31.837138548247584 31.0 31.0 34.0 30.0 34.0 4 35.579961487965726 37.0 35.0 37.0 33.0 37.0 5 35.4545560953513 37.0 35.0 37.0 33.0 37.0 6 35.503831976989126 37.0 35.0 37.0 33.0 37.0 7 35.887372793871876 37.0 35.0 37.0 35.0 37.0 8 35.912161377001716 37.0 35.0 37.0 35.0 37.0 9 37.650163340211186 39.0 37.0 39.0 35.0 39.0 10 36.99237534401591 39.0 37.0 39.0 32.0 39.0 11 36.680419415237395 39.0 35.0 39.0 32.0 39.0 12 36.00130105939786 37.0 35.0 39.0 31.0 39.0 13 35.67711796116936 38.0 35.0 39.0 30.0 39.0 14 36.768106339527066 39.0 35.0 41.0 31.0 41.0 15 37.02280804873627 39.0 35.0 41.0 32.0 41.0 16 37.12233972651131 39.0 35.0 41.0 32.0 41.0 17 37.05814159363085 38.0 35.0 41.0 32.0 41.0 18 37.002022790301254 38.0 35.0 41.0 32.0 41.0 19 36.9217843148606 38.0 35.0 41.0 32.0 41.0 20 36.76936894604893 38.0 35.0 41.0 31.0 41.0 21 36.67405567553886 38.0 35.0 41.0 31.0 41.0 22 36.56895678192529 38.0 35.0 40.0 31.0 41.0 23 36.51049700130951 38.0 35.0 40.0 31.0 41.0 24 36.398885627202326 38.0 35.0 40.0 31.0 41.0 25 36.31117630728158 38.0 35.0 40.0 31.0 41.0 26 36.13822794780381 38.0 35.0 40.0 30.0 41.0 27 36.05306412376248 38.0 35.0 40.0 30.0 41.0 28 35.99059256727035 38.0 35.0 40.0 30.0 41.0 29 36.02255282305381 38.0 35.0 40.0 30.0 41.0 30 36.01768832296021 38.0 35.0 40.0 30.0 41.0 31 35.91612455858422 38.0 35.0 40.0 30.0 41.0 32 35.80603017156321 38.0 34.0 40.0 30.0 41.0 33 35.73897427164548 38.0 34.0 40.0 29.0 41.0 34 35.67058562039912 38.0 34.0 40.0 29.0 41.0 35 35.55986542338518 38.0 34.0 40.0 29.0 41.0 36 35.45161381649865 38.0 34.0 40.0 28.0 41.0 37 35.37013513016721 38.0 34.0 40.0 27.0 41.0 38 35.292003111725045 37.0 34.0 40.0 27.0 41.0 39 35.25269751150734 37.0 34.0 40.0 27.0 41.0 40 35.099757746881195 37.0 34.0 40.0 27.0 41.0 41 35.04878782590397 37.0 34.0 40.0 26.0 41.0 42 34.98873161709556 37.0 34.0 40.0 26.0 41.0 43 34.963741895845104 37.0 34.0 40.0 27.0 41.0 44 34.83110186927459 37.0 34.0 40.0 26.0 41.0 45 34.703118443731825 36.0 34.0 40.0 26.0 41.0 46 34.66860888903725 36.0 34.0 40.0 26.0 41.0 47 34.625054879860116 36.0 33.0 40.0 26.0 41.0 48 34.55785066170639 36.0 34.0 40.0 26.0 41.0 49 34.48884972235756 36.0 33.0 40.0 26.0 41.0 50 34.374912160531885 36.0 33.0 40.0 25.0 41.0 51 33.78798732153746 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 3.0 12 3.0 13 9.0 14 31.0 15 62.0 16 177.0 17 455.0 18 1006.0 19 1998.0 20 3539.0 21 5617.0 22 8399.0 23 12721.0 24 17921.0 25 25222.0 26 33378.0 27 40065.0 28 46156.0 29 54068.0 30 64031.0 31 77610.0 32 95692.0 33 123212.0 34 204434.0 35 301136.0 36 180736.0 37 218765.0 38 316266.0 39 533552.0 40 266.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.17591599187503 24.510877304478747 29.080008603302804 13.233198100343413 2 29.47658029699987 26.55796475265716 30.116588274915244 13.848866675427725 3 29.67209838189453 26.11330583600567 30.929084868032685 13.28551091406712 4 26.538231243764614 28.644899521789892 29.862376734235273 14.954492500210224 5 23.750059686469616 32.64991445291487 29.162365367396102 14.437660493219406 6 21.862361522108504 42.22751172284519 25.625841684861356 10.28428507018495 7 89.01899952377592 4.022720156448273 5.579639075390032 1.3786412443857745 8 89.61894890119851 3.3084262928089316 5.22621066344733 1.846414142545234 9 84.31359292264253 6.31818783004505 6.930475932513936 2.4377433147984835 10 44.714652193736576 32.33920676364961 12.285651626239735 10.660489416374078 11 39.23528638730159 21.67719613459859 23.465677427696974 15.621840050402847 12 36.29837403492789 21.72046618407603 25.611221140799646 16.369938640196438 13 22.10267086915754 34.8757021347262 25.78704797270944 17.234579023406816 14 17.234240976145273 37.69193161472922 27.730946494302 17.3428809148235 15 16.767228684324284 26.34207932025457 40.247315376544506 16.643376618876644 16 18.959465175427514 22.91947756485965 39.20558048419354 18.915476775519295 17 18.374643412958957 23.7277908231155 28.4031534738793 29.49441229004624 18 22.130686535957874 25.178731925563685 32.19612826020174 20.4944532782767 19 27.574768659469356 26.25587726856122 25.81810606486366 20.351248007105756 20 29.80562705020382 25.073218924054725 25.642448256584633 19.47870576915682 21 23.323655321941423 28.809908841330333 27.423703789467545 20.442732047260698 22 24.390870526631154 24.00427122714959 26.300795298438683 25.30406294778057 23 21.70707106133741 29.43166226712241 25.818866671202134 23.04240000033805 24 20.44243625590685 25.60475598692264 35.53633099559567 18.41647676157484 25 20.7661587647415 27.51421594374556 31.591953292009872 20.12767199950307 26 18.791751477794733 34.32422028342727 26.078740503512943 20.80528773526505 27 19.907476464515813 32.374110143403875 27.734411478732813 19.9840019133475 28 17.49711497790227 29.665759995740604 34.38988596398191 18.44723906237521 29 17.54735725214903 26.721326091797582 33.306951561630456 22.42436509442294 30 19.625418280666274 30.95566383397147 29.531977791985152 19.886940093377103 31 27.767455598548597 27.3263461781433 24.570753925679465 20.33544429762864 32 26.95990294663121 28.088135682029364 26.16511157883706 18.786849792502366 33 25.217058033841067 28.75637060628354 25.050062686639063 20.97650867323633 34 20.227395941658113 28.324895532832205 27.630546457623872 23.817162067885807 35 21.699042438875775 26.137983286098272 29.763455654326393 22.399518620699563 36 28.056190215813597 27.873348903226784 25.235270330056668 18.835190550902944 37 20.872559140312006 32.11537722060077 27.98008732605884 19.031976313028384 38 20.876277660188975 32.52234386759027 25.481664527813475 21.119713944407284 39 22.54225907688589 30.14561808350021 26.40622378813226 20.90589905148164 40 23.88025013807118 28.07482507110613 26.377405259085762 21.667519531736936 41 18.94695742675044 26.51968090028747 28.381476193232885 26.15188547972921 42 21.46811390333454 28.029273202613275 25.01684954319251 25.485763350859674 43 22.749313024580683 26.229763117607064 26.67961951090477 24.34130434690748 44 20.49458004599978 29.60968640623224 27.863545532642053 22.032188015125925 45 19.46547967004897 33.96766493431531 24.535808290017506 22.031047105618217 46 22.30845713962155 31.327896124837473 25.521385081044716 20.842261654496262 47 22.22791737955904 28.043851490767295 27.41816826555979 22.310062864113874 48 22.324767919990972 26.59882621539611 30.163872635623505 20.91253322898941 49 21.019609699083006 27.249355914326994 29.963452865436484 21.767581521153517 50 20.355220062428877 30.757737162338323 28.177549182707363 20.709493592525437 51 20.67606916954042 30.801429770892696 26.209522537822206 22.31297852174468 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3274.0 1 3822.0 2 4370.0 3 12373.0 4 20376.0 5 14225.5 6 8075.0 7 8433.5 8 8792.0 9 9441.0 10 10090.0 11 10561.0 12 11032.0 13 10770.0 14 10508.0 15 9966.5 16 9425.0 17 9038.0 18 8651.0 19 8328.0 20 8005.0 21 8416.5 22 8828.0 23 10414.0 24 12000.0 25 14217.5 26 18751.0 27 21067.0 28 29052.0 29 37037.0 30 44176.5 31 51316.0 32 52841.5 33 54367.0 34 60336.0 35 66305.0 36 73921.0 37 81537.0 38 90575.5 39 99614.0 40 122674.5 41 145735.0 42 171905.5 43 198076.0 44 207136.5 45 216197.0 46 201815.5 47 187434.0 48 187556.5 49 187679.0 50 182282.5 51 176886.0 52 159522.0 53 142158.0 54 130611.0 55 119064.0 56 112218.5 57 105373.0 58 97898.5 59 90424.0 60 80505.0 61 70586.0 62 63650.5 63 56715.0 64 47765.5 65 38816.0 66 32502.0 67 26188.0 68 22836.5 69 19485.0 70 16210.5 71 12936.0 72 11340.5 73 9745.0 74 7359.5 75 4172.5 76 3371.0 77 2685.0 78 1999.0 79 1479.5 80 960.0 81 688.0 82 416.0 83 272.0 84 128.0 85 79.5 86 31.0 87 27.5 88 24.0 89 17.5 90 11.0 91 11.0 92 11.0 93 7.0 94 3.0 95 1.5 96 0.0 97 1.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2366533.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.888411911767161 #Duplication Level Percentage of deduplicated Percentage of total 1 79.96524976627869 11.905555771477 2 8.011302033741462 2.3855112925584168 3 2.6866847342253033 1.2000140700060895 4 1.2965131247987234 0.7721208580406311 5 0.7604394276933949 0.5660867716723872 6 0.5192236743272775 0.46382495626354503 7 0.35720199280737613 0.37227192832342143 8 0.2815608078363901 0.33535946282224766 9 0.22435430679134966 0.30062514003197344 >10 2.448579129615987 8.886717913513396 >50 1.3313130125546624 14.712743178154813 >100 2.0991992272848776 55.146993985109475 >500 0.015219912318124794 1.459092311724315 >1k 0.002871681569457508 0.9111898305584611 >5k 0.0 0.0 >10k+ 2.871681569457508E-4 0.5818925297438371 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13610 0.5751029036992089 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3493 0.14759988557100195 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3236 0.13674011729394858 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2656 0.11223169083211602 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.267677230784443E-4 0.0 0.0 0.03536819473888596 0.0 2 1.267677230784443E-4 0.0 0.0 0.11776721473987474 0.0 3 1.267677230784443E-4 0.0 0.0 0.17274215064822676 0.0 4 1.267677230784443E-4 0.0 0.0 0.32503244197313114 0.0 5 1.267677230784443E-4 0.0 0.0 0.543622252468062 0.0 6 1.267677230784443E-4 0.0 0.0 0.8380614172715952 0.0 7 1.267677230784443E-4 0.0 0.0 0.9798722434886815 0.0 8 1.267677230784443E-4 0.0 0.0 1.3398925770314634 0.0 9 1.267677230784443E-4 0.0 0.0 1.4574062563251813 0.0 10 1.267677230784443E-4 0.0 0.0 1.6968282293126695 0.0 11 1.267677230784443E-4 0.0 0.0 1.9890700869161766 0.0 12 1.267677230784443E-4 0.0 0.0 2.22616798498056 0.0 13 1.267677230784443E-4 0.0 0.0 2.331342939227976 0.0 14 1.267677230784443E-4 0.0 0.0 2.3670491812284045 0.0 15 1.267677230784443E-4 0.0 0.0 2.424432703875247 0.0 16 1.267677230784443E-4 0.0 0.0 2.551496218307541 0.0 17 1.267677230784443E-4 0.0 0.0 2.7028568796632033 0.0 18 1.267677230784443E-4 0.0 0.0 2.896388936896295 0.0 19 1.267677230784443E-4 0.0 0.0 2.994464898651318 0.0 20 1.267677230784443E-4 0.0 0.0 3.0968087070833157 0.0 21 1.267677230784443E-4 0.0 0.0 3.234436198438813 0.0 22 1.267677230784443E-4 0.0 0.0 3.3768808632712917 0.0 23 1.267677230784443E-4 0.0 0.0 3.5345376548731835 0.0 24 1.267677230784443E-4 0.0 0.0 3.664009756043968 0.0 25 1.267677230784443E-4 0.0 0.0 3.7662690526605798 0.0 26 1.267677230784443E-4 0.0 0.0 3.864091478969446 0.0 27 1.267677230784443E-4 0.0 0.0 3.960096901247521 0.0 28 1.267677230784443E-4 0.0 0.0 4.064299969618002 0.0 29 1.267677230784443E-4 0.0 0.0 4.179193782634766 0.0 30 1.267677230784443E-4 0.0 0.0 4.322652589251872 0.0 31 1.267677230784443E-4 0.0 0.0 4.459477218361206 0.0 32 1.267677230784443E-4 0.0 0.0 4.577497968547237 0.0 33 1.267677230784443E-4 0.0 0.0 4.698054073194839 0.0 34 1.267677230784443E-4 0.0 0.0 4.827526174365623 0.0 35 1.267677230784443E-4 0.0 0.0 4.994394753844548 0.0 36 1.267677230784443E-4 0.0 0.0 5.1351491823693145 0.0 37 1.267677230784443E-4 0.0 0.0 5.2771712881248645 0.0 38 1.267677230784443E-4 0.0 0.0 5.418390531634252 0.0 39 1.267677230784443E-4 0.0 0.0 5.562652200497521 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGTT 20 7.034803E-4 45.0 13 CGCATTA 25 3.892063E-5 45.0 16 CGCATCG 100 0.0 45.0 21 TCGATAG 90 0.0 45.0 1 CCGTCGA 20 7.034803E-4 45.0 43 ATATCGA 25 3.892063E-5 45.0 16 ACGATAC 35 1.2126657E-7 45.0 20 TACGATA 35 1.2126657E-7 45.0 23 CGCTAAT 20 7.034803E-4 45.0 22 GCGATCG 25 3.892063E-5 45.0 9 TTACGAC 20 7.034803E-4 45.0 18 ACCCGTA 20 7.034803E-4 45.0 33 ACGTAAC 20 7.034803E-4 45.0 44 CACGTAA 20 7.034803E-4 45.0 23 TTACCCG 20 7.034803E-4 45.0 24 TACCGTT 70 0.0 45.0 14 CGAAGTA 40 6.8212103E-9 45.0 21 CGTATCA 65 0.0 44.999996 38 ATTACGT 30 2.16648E-6 44.999996 33 GAACGTA 30 2.16648E-6 44.999996 36 >>END_MODULE