##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547431_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1019675 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19081275896732 31.0 31.0 33.0 30.0 34.0 2 31.583466300536937 31.0 31.0 34.0 30.0 34.0 3 31.709715350479318 31.0 31.0 34.0 30.0 34.0 4 35.47888788094246 37.0 35.0 37.0 33.0 37.0 5 35.347049795277904 37.0 35.0 37.0 33.0 37.0 6 35.395460318238655 37.0 35.0 37.0 33.0 37.0 7 35.8308716012455 37.0 35.0 37.0 35.0 37.0 8 35.87265942579744 37.0 35.0 37.0 35.0 37.0 9 37.62054576213009 39.0 37.0 39.0 35.0 39.0 10 36.881513227253784 39.0 37.0 39.0 32.0 39.0 11 36.59263883100007 39.0 35.0 39.0 32.0 39.0 12 35.95574472258318 37.0 35.0 39.0 31.0 39.0 13 35.644477897369256 37.0 35.0 39.0 30.0 39.0 14 36.693284625003066 38.0 35.0 41.0 31.0 41.0 15 36.92427979503273 38.0 35.0 41.0 31.0 41.0 16 37.0450006129404 38.0 35.0 41.0 32.0 41.0 17 36.97125162429205 38.0 35.0 41.0 32.0 41.0 18 36.90351239365484 38.0 35.0 40.0 32.0 41.0 19 36.818059675877116 38.0 35.0 40.0 31.0 41.0 20 36.64176919116385 38.0 35.0 40.0 31.0 41.0 21 36.53478118027803 38.0 35.0 40.0 31.0 41.0 22 36.439753843136295 38.0 35.0 40.0 31.0 41.0 23 36.387169441243536 38.0 35.0 40.0 31.0 41.0 24 36.259337534018194 38.0 35.0 40.0 30.0 41.0 25 36.13880010787751 38.0 35.0 40.0 30.0 41.0 26 35.99274866991934 38.0 35.0 40.0 30.0 41.0 27 35.89383480030402 37.0 34.0 40.0 30.0 41.0 28 35.81447814254542 37.0 34.0 40.0 30.0 41.0 29 35.80254688994042 37.0 34.0 40.0 30.0 41.0 30 35.76516144850075 37.0 34.0 40.0 30.0 41.0 31 35.64781131242798 37.0 34.0 40.0 29.0 41.0 32 35.50954961139579 37.0 34.0 40.0 29.0 41.0 33 35.42138034177557 37.0 34.0 40.0 28.0 41.0 34 35.29821560791429 37.0 34.0 40.0 27.0 41.0 35 35.20821143991958 37.0 34.0 40.0 27.0 41.0 36 35.14253953465565 37.0 34.0 40.0 27.0 41.0 37 35.084223894868465 37.0 34.0 40.0 26.0 41.0 38 35.00652168583127 37.0 34.0 40.0 26.0 41.0 39 34.976115919288006 37.0 34.0 40.0 26.0 41.0 40 34.86113908843504 37.0 34.0 40.0 26.0 41.0 41 34.820842915634884 37.0 34.0 40.0 26.0 41.0 42 34.77376811238875 36.0 34.0 40.0 26.0 41.0 43 34.720657072106306 36.0 33.0 40.0 26.0 41.0 44 34.55561428886655 36.0 33.0 40.0 25.0 41.0 45 34.41075931056464 36.0 33.0 40.0 24.0 41.0 46 34.370572976683746 36.0 33.0 40.0 24.0 41.0 47 34.326842376247335 35.0 33.0 40.0 24.0 41.0 48 34.25232451516415 35.0 33.0 40.0 24.0 41.0 49 34.20179272807512 36.0 33.0 40.0 24.0 41.0 50 34.05989163213769 35.0 33.0 40.0 24.0 41.0 51 33.50386054380072 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 4.0 12 2.0 13 7.0 14 14.0 15 34.0 16 80.0 17 203.0 18 484.0 19 885.0 20 1599.0 21 2628.0 22 4249.0 23 6105.0 24 8868.0 25 12252.0 26 15610.0 27 18227.0 28 20831.0 29 24058.0 30 28909.0 31 35008.0 32 43188.0 33 55642.0 34 88328.0 35 131487.0 36 83766.0 37 95533.0 38 131309.0 39 210193.0 40 168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.43418246009758 24.858901120455045 28.402186971338907 13.304729448108466 2 30.44901561772133 26.336528795939884 29.71750802951921 13.496947556819574 3 29.32257827248878 25.79743545737612 31.697060337852744 13.182925932282345 4 26.154215804055212 27.68146713413588 30.719984308725817 15.44433275308309 5 22.100669330914265 32.8252629514306 30.21756932355898 14.856498394096157 6 19.240051977345722 42.49559908794469 27.896045308554196 10.368303626155392 7 87.78895236227228 3.7787530340549687 6.5676808787113545 1.8646137249613848 8 88.47093436634222 3.293598450486675 6.116850957412901 2.118616225758207 9 84.0802216392478 5.414960649226469 7.830926520705127 2.6738911908206044 10 43.175325471351165 29.15987937332974 14.868953342976928 12.795841812342168 11 36.9274523745311 24.072572143084805 22.284257238826097 16.715718243557998 12 34.53963272611371 22.968691004486725 26.32436805845 16.167308210949567 13 22.502365949935026 34.94956726407924 26.540809571677247 16.00725721430848 14 17.683379508176625 39.884178782455194 26.352121999656752 16.08031970971143 15 15.702356142888666 26.840709049452034 39.98793733297374 17.468997474685562 16 17.577659548385515 22.70429303454532 40.55753058572584 19.16051683134332 17 17.290313089955134 23.472773187535246 27.785519896045308 31.45139382646431 18 20.65972000882634 27.80464363645279 30.72675117071616 20.80888518400471 19 26.542084487704415 29.066418221492142 24.027263588888616 20.364233701914824 20 28.228602250717138 26.173437614926325 24.53428788584598 21.063672248510553 21 22.849927673033076 29.507343025964154 27.692156814671343 19.95057248633143 22 23.665285507637236 25.725844018927603 25.6850467060583 24.92382376737686 23 19.686468727780913 31.54897393777429 24.495942334567385 24.26861499987741 24 19.792482898962906 27.21671120700223 34.30946134797852 18.68134454605634 25 19.45051119229166 28.514968004511243 31.307818667712752 20.726702135484345 26 17.54617892956089 34.21354843455022 25.3065927869174 22.933679848971487 27 17.995930075759432 33.578247971167286 27.796013435653517 20.629808517419765 28 17.57844411209454 29.637188319807784 33.72309804594601 19.061269522151665 29 16.600093166940447 28.099541520582537 32.7181700051487 22.582195307328316 30 19.171794934660554 31.709024934415375 29.81655919778361 19.30262093314046 31 26.825017775271533 29.57285409566774 23.56142888665506 20.04069924240567 32 26.089097016206143 29.889131340868413 25.234510996150732 18.78726064677471 33 25.702601319047737 29.06377031897418 23.45639542010935 21.777232941868732 34 20.275676073258637 29.71270257680143 26.53727903498664 23.474342314953294 35 20.212126412827615 27.398828057959644 28.684629906587883 23.704415622624854 36 26.51903792875181 28.624218500992963 25.179885747909875 19.676857822345355 37 19.734523254958688 32.108465932772695 27.401377890013972 20.75563292225464 38 20.75190624463677 33.86824233211563 24.52585382597396 20.85399759727364 39 20.211636060509473 31.05391423737956 25.539608208497803 23.19484149361316 40 21.706327996665603 27.585652291171208 28.027852011670383 22.680167700492802 41 17.95542697428102 26.26366244146419 28.153872557432514 27.62703802682227 42 21.020325103586927 28.691789050432735 25.004928040797314 25.282957805183027 43 21.64101306788928 28.713462622894546 25.6731801799593 23.97234412925687 44 20.030990266506485 31.058327408242825 27.05960232426999 21.851080000980705 45 18.431068722877384 34.79579277711035 23.951357050040453 22.821781449971805 46 22.29720254002501 32.030892196042856 25.887562213450366 19.78434305048177 47 21.29560889499105 30.10282688111408 25.590310638193543 23.011253585701326 48 20.667173364062077 28.99718047417069 28.78250422928874 21.553141932478486 49 21.399367445509597 27.11971951847402 28.84879986270135 22.632113173315027 50 19.417167234658102 30.330546497658567 28.48799862701351 21.76428764066982 51 18.7391080491333 31.47032142594454 26.465099173756347 23.325471351165813 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1579.0 1 1675.0 2 1771.0 3 6207.5 4 10644.0 5 7144.0 6 3644.0 7 4001.0 8 4358.0 9 5343.0 10 6328.0 11 6860.0 12 7392.0 13 7493.5 14 7595.0 15 7092.0 16 6589.0 17 6141.5 18 5694.0 19 5129.0 20 4564.0 21 4624.0 22 4684.0 23 4905.5 24 5127.0 25 5819.0 26 8343.5 27 10176.0 28 10580.0 29 10984.0 30 13775.0 31 16566.0 32 18951.0 33 21336.0 34 23791.5 35 26247.0 36 29614.5 37 32982.0 38 36372.0 39 39762.0 40 48266.5 41 56771.0 42 68724.0 43 80677.0 44 83127.5 45 85578.0 46 85572.5 47 85567.0 48 92162.0 49 98757.0 50 92466.5 51 86176.0 52 78714.0 53 71252.0 54 63517.0 55 55782.0 56 50115.0 57 44448.0 58 39806.0 59 35164.0 60 30874.0 61 26584.0 62 22423.0 63 18262.0 64 15322.5 65 12383.0 66 10450.0 67 8517.0 68 7105.0 69 5693.0 70 5073.5 71 4454.0 72 3926.0 73 3398.0 74 3083.5 75 2074.0 76 1379.0 77 1104.5 78 830.0 79 631.5 80 433.0 81 285.5 82 138.0 83 94.0 84 50.0 85 44.5 86 39.0 87 31.5 88 24.0 89 14.5 90 5.0 91 4.5 92 4.0 93 4.0 94 4.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1019675.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.397252649118336 #Duplication Level Percentage of deduplicated Percentage of total 1 77.73641532620951 16.633457187717 2 8.828205586966293 3.7779869076535166 3 3.202906836530804 2.0560022037851393 4 1.6332720770957476 1.3979014111347199 5 1.0157187956859337 1.0866795845875066 6 0.6459632838097411 0.8293103751438697 7 0.49011541802401537 0.7340986398681674 8 0.4006234246199307 0.6857792506998139 9 0.33382340938004995 0.642861344762549 >10 3.360874192045677 16.832423201248417 >50 1.310935535114873 20.427410045249168 >100 1.0355834460516369 32.89030636153839 >500 0.0023177785274208526 0.3016312720198985 >1k 0.0027813342329050233 0.9053897569870548 >5k 4.6355570548417053E-4 0.798762457604815 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8053 0.7897614435972247 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2136 0.20947851030965747 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1980 0.19417951798367125 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1413 0.13857356510652905 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1307 0.12817809596194868 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1281 0.1256282639076176 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.80704636281168E-5 0.0 0.0 0.08169269620222129 0.0 2 9.80704636281168E-5 0.0 0.0 0.26224041974158435 0.0 3 9.80704636281168E-5 0.0 0.0 0.3875744722583176 0.0 4 9.80704636281168E-5 0.0 0.0 0.6421653958369088 0.0 5 9.80704636281168E-5 0.0 0.0 1.1499742565032975 0.0 6 9.80704636281168E-5 0.0 0.0 1.6687670090960356 0.0 7 9.80704636281168E-5 0.0 0.0 2.000049035231814 0.0 8 9.80704636281168E-5 0.0 0.0 2.7444038541692204 0.0 9 9.80704636281168E-5 0.0 0.0 2.9992889891386962 0.0 10 9.80704636281168E-5 0.0 0.0 3.4672812415720697 0.0 11 9.80704636281168E-5 0.0 0.0 4.083457964547527 0.0 12 1.961409272562336E-4 0.0 0.0 4.5749871282516485 0.0 13 1.961409272562336E-4 0.0 0.0 4.768284012062667 0.0 14 1.961409272562336E-4 0.0 0.0 4.843700198592689 0.0 15 1.961409272562336E-4 0.0 0.0 4.954814033883345 0.0 16 1.961409272562336E-4 0.0 0.0 5.212935494152549 0.0 17 1.961409272562336E-4 0.0 0.0 5.510677421727511 0.0 18 1.961409272562336E-4 0.0 0.0 5.887562213450364 0.0 19 2.942113908843504E-4 0.0 0.0 6.077916983352539 0.0 20 2.942113908843504E-4 0.0 0.0 6.262681736827911 0.0 21 2.942113908843504E-4 0.0 0.0 6.533258145977885 0.0 22 2.942113908843504E-4 0.0 0.0 6.80069630029176 0.0 23 2.942113908843504E-4 0.0 0.0 7.121484786819329 0.0 24 2.942113908843504E-4 0.0 0.0 7.354598278863364 0.0 25 2.942113908843504E-4 0.0 0.0 7.5457376124745625 0.0 26 2.942113908843504E-4 0.0 0.0 7.716870571505627 0.0 27 2.942113908843504E-4 0.0 0.0 7.883198077818913 0.0 28 2.942113908843504E-4 0.0 0.0 8.072768284012062 0.0 29 2.942113908843504E-4 0.0 0.0 8.274205016304215 0.0 30 2.942113908843504E-4 0.0 0.0 8.522617500674235 0.0 31 2.942113908843504E-4 0.0 0.0 8.74827763748253 0.0 32 2.942113908843504E-4 0.0 0.0 8.957363865937676 0.0 33 2.942113908843504E-4 0.0 0.0 9.171255547110599 0.0 34 3.922818545124672E-4 0.0 0.0 9.411724323926741 0.0 35 3.922818545124672E-4 0.0 0.0 9.667590163532498 0.0 36 3.922818545124672E-4 0.0 0.0 9.895211709613358 0.0 37 3.922818545124672E-4 0.0 0.0 10.133326795302425 0.0 38 3.922818545124672E-4 0.0 0.0 10.361046411846912 0.0 39 3.922818545124672E-4 0.0 0.0 10.57827248878319 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTACG 25 3.8904946E-5 45.0 1 AATCCCG 25 3.8904946E-5 45.0 23 ATTAGCG 25 3.8904946E-5 45.0 1 AGTCACG 20 7.0329127E-4 45.0 1 TCTTCGA 25 3.8904946E-5 45.0 26 GACCGTT 25 3.8904946E-5 45.0 37 CGCATCA 20 7.0329127E-4 45.0 18 CGTTCGA 20 7.0329127E-4 45.0 14 ATCGTAG 20 7.0329127E-4 45.0 1 CGCCTAT 25 3.8904946E-5 45.0 32 CCCGTGA 20 7.0329127E-4 45.0 11 CCGTAGA 25 3.8904946E-5 45.0 12 TACGATT 20 7.0329127E-4 45.0 44 CGGATGT 25 3.8904946E-5 45.0 6 TGTTACG 25 3.8904946E-5 45.0 1 TCCGTTA 20 7.0329127E-4 45.0 45 CATGTCG 20 7.0329127E-4 45.0 13 TAGATCA 25 3.8904946E-5 45.0 33 CGGTCCC 20 7.0329127E-4 45.0 28 ATACGGA 20 7.0329127E-4 45.0 4 >>END_MODULE