SRR1547430_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547430_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2656310
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	39014	1.4687291769409443	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTT	4182	0.15743644378856383	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCT	2949	0.11101866875477637	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTC	2796	0.1052587988600728	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCGC	25	3.8921935E-5	44.999996	34
CGTTTTT	19525	0.0	43.236874	1
TAACGCG	45	1.9299478E-8	40.0	1
TATTGCG	215	0.0	38.720932	1
CGTTAGG	355	0.0	38.661972	2
TAGGGAC	3500	0.0	38.314285	5
CGACCCG	525	0.0	37.714283	32
TATGGGA	3620	0.0	37.665745	4
CGAGGGA	1915	0.0	37.59791	4
TAGGGAT	5285	0.0	37.251656	5
TAGGGCG	980	0.0	37.19388	5
ATAGGGA	4700	0.0	37.101063	4
CACGACC	655	0.0	37.099236	27
AGGGATT	6120	0.0	36.985294	6
GTTTTTT	23160	0.0	36.85881	2
ACGGGAT	1635	0.0	36.74312	5
TAAGGGA	3895	0.0	36.73941	4
GGGCGAT	4615	0.0	36.663055	7
GGCGATT	1235	0.0	36.072876	8
TACGGGA	1285	0.0	36.070038	4