##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547430_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2656310 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238681855656907 31.0 31.0 33.0 30.0 34.0 2 31.641654400277076 31.0 31.0 34.0 30.0 34.0 3 31.678832666368006 31.0 31.0 34.0 30.0 34.0 4 35.49308439150551 37.0 35.0 37.0 33.0 37.0 5 35.39189928886312 37.0 35.0 37.0 33.0 37.0 6 35.4479842337679 37.0 35.0 37.0 33.0 37.0 7 35.90647815955216 37.0 35.0 37.0 35.0 37.0 8 35.95621934186898 37.0 35.0 37.0 35.0 37.0 9 37.682794929808644 39.0 37.0 39.0 35.0 39.0 10 37.012496658898996 39.0 37.0 39.0 33.0 39.0 11 36.698028091600754 39.0 35.0 39.0 32.0 39.0 12 36.411689147727486 39.0 35.0 39.0 32.0 39.0 13 36.32399719912209 39.0 35.0 39.0 32.0 39.0 14 37.422919011711734 40.0 36.0 41.0 32.0 41.0 15 37.54136866555485 40.0 36.0 41.0 32.0 41.0 16 37.57305962030034 40.0 36.0 41.0 32.0 41.0 17 37.47942634707545 39.0 36.0 41.0 32.0 41.0 18 37.31980228211316 39.0 36.0 41.0 32.0 41.0 19 37.202826477331335 39.0 36.0 41.0 32.0 41.0 20 37.01856409831684 39.0 35.0 41.0 32.0 41.0 21 36.9508016760092 39.0 35.0 41.0 31.0 41.0 22 36.884846271707744 38.0 35.0 41.0 31.0 41.0 23 36.80818428571966 38.0 35.0 41.0 31.0 41.0 24 36.71415572730592 38.0 35.0 40.0 31.0 41.0 25 36.61717269445208 38.0 35.0 40.0 31.0 41.0 26 36.47298093972466 38.0 35.0 40.0 31.0 41.0 27 36.37991386547504 38.0 35.0 40.0 30.0 41.0 28 36.25704755845515 38.0 35.0 40.0 30.0 41.0 29 36.247308484326 38.0 35.0 40.0 30.0 41.0 30 36.13977397216439 38.0 35.0 40.0 30.0 41.0 31 35.97197352718621 38.0 35.0 40.0 30.0 41.0 32 35.78693864797407 38.0 35.0 40.0 29.0 41.0 33 35.55438408920646 38.0 34.0 40.0 27.0 41.0 34 35.33596191709552 38.0 34.0 40.0 25.0 41.0 35 35.137398496410434 38.0 34.0 40.0 25.0 41.0 36 35.06145630592815 38.0 34.0 40.0 24.0 41.0 37 34.99704853725657 38.0 34.0 40.0 24.0 41.0 38 34.894508924033715 38.0 34.0 40.0 24.0 41.0 39 34.82203921981998 38.0 34.0 40.0 23.0 41.0 40 34.74135435999563 38.0 34.0 40.0 23.0 41.0 41 34.63040157210567 38.0 34.0 40.0 23.0 41.0 42 34.58455677236467 38.0 33.0 40.0 23.0 41.0 43 34.54189157139039 38.0 33.0 40.0 23.0 41.0 44 34.41468729176941 38.0 33.0 40.0 23.0 41.0 45 34.31065500638103 37.0 33.0 40.0 23.0 41.0 46 34.28425296746238 37.0 33.0 40.0 23.0 41.0 47 34.22857535453317 37.0 33.0 40.0 23.0 41.0 48 34.132466843101895 37.0 33.0 40.0 22.0 41.0 49 34.04863212501553 37.0 33.0 40.0 22.0 41.0 50 33.94587755194236 37.0 33.0 40.0 22.0 41.0 51 33.38228218844939 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 9.0 14 14.0 15 58.0 16 220.0 17 495.0 18 1267.0 19 2520.0 20 4397.0 21 7172.0 22 11039.0 23 16760.0 24 25111.0 25 37749.0 26 50760.0 27 57062.0 28 58691.0 29 62672.0 30 71481.0 31 83398.0 32 100486.0 33 125536.0 34 183788.0 35 245268.0 36 216030.0 37 264404.0 38 380964.0 39 648646.0 40 308.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.903697234133066 23.34919493583204 27.318611156077417 18.428496673957483 2 34.620921503890735 24.209900199901366 28.687577880593757 12.48160041561414 3 27.171602712032854 24.74315874276722 35.375577398722285 12.709661146477632 4 24.096434527596553 27.475595845364438 34.80711965094436 13.620849976094657 5 21.944426667068225 31.276469990324923 33.2637756888315 13.51532765377535 6 20.231674766875855 39.72917317632355 29.89831759094383 10.140834465856772 7 85.47308107863917 2.8545614028483124 10.054587002270067 1.6177705162424567 8 86.11280309903589 2.272776897274791 9.654332513900862 1.960087489788466 9 80.59925234629995 5.317903407358328 11.55625661161536 2.5265876347263685 10 35.86064879475664 37.242979923277026 16.48967929195011 10.406691990016226 11 25.853496015148835 24.656196001219737 33.12888932391174 16.361418659719686 12 25.77044847928141 22.96877999932237 32.969307046240836 18.291464475155383 13 22.101938403273714 26.41909265108365 33.79793774070045 17.681031204942194 14 17.678923017268318 30.021797154699563 33.83302400698713 18.46625582104498 15 17.306865539037236 26.703735633265698 38.583448467987544 17.40595035970952 16 21.094902326912145 25.43822068960325 36.84641476333711 16.6204622201475 17 19.927116940417346 25.447067548591846 32.984139652374914 21.6416758586159 18 20.82494136603032 25.47247873930377 34.87303816196152 18.829541732704392 19 23.102085223486714 27.807823635042595 31.114478355312446 17.975612786158244 20 24.288881945254882 27.500479989157895 30.53314560424047 17.677492461346755 21 22.31027252090306 27.203790220267965 32.89936039091823 17.586576867910747 22 21.51202231667238 24.40927451991673 32.90899782028453 21.169705343126367 23 18.990027519378387 28.30091367347938 32.5359991868419 20.17305962030034 24 19.10688135044479 26.94534899917555 35.934811825427005 18.01295782495266 25 20.209727027342442 28.156803987486402 32.31140190715692 19.32206707801424 26 18.55201388392168 30.899254981534536 30.740500920449797 19.80823021409399 27 19.129883183815142 28.74562833404234 32.56750906332469 19.556979418817832 28 18.174610644088983 28.47005808809966 35.032131038922415 18.323200228888947 29 19.330612767335136 26.148454058449506 34.47007314658304 20.050860027632318 30 20.968825174772523 26.793898302532458 33.397570313705856 18.839706208989163 31 22.852716738633667 27.022900188607508 30.77690480403266 19.347478268726164 32 23.903798878895913 27.61729617401583 30.2395804706529 18.239324476435357 33 22.425771088464824 27.29429170541089 30.849223170488383 19.4307140356359 34 21.132096780872715 28.238797429516886 31.06794764165327 19.561158147957126 35 20.42303044448878 28.55013157349858 31.36561621196321 19.66122177004943 36 24.105206094168224 28.336150524599912 28.941840372546878 18.61680300868498 37 21.003083224473045 30.75330063132692 29.793021145875294 18.450594998324743 38 21.214203161528587 30.647477139339912 29.019617439229606 19.118702259901895 39 20.562810816508616 30.297405046850706 28.72624053668435 20.41354359995633 40 22.60907047746686 28.502960874295546 29.288034905564487 19.599933742673105 41 19.557167649860144 28.522800426155083 29.70929597825555 22.210735945729226 42 21.388956861209724 29.094156931984593 28.300876027270917 21.21601017953477 43 20.994010488233677 28.427819042205165 29.76162420801789 20.81654626154327 44 20.494407655732953 30.1196396504926 29.178559731356657 20.20739296241779 45 19.7604195293471 30.264201090987118 28.64210126077152 21.333278118894256 46 21.17079708317177 29.35873448505634 28.813052693397985 20.65741573837391 47 20.5020121898423 28.69872115829854 30.027481732177343 20.771784919681817 48 20.877194303375735 28.056627426768717 30.654516980322327 20.411661289533225 49 21.04106824881132 27.652871841012534 30.072845413374193 21.233214496801956 50 20.02469591275115 29.094834563736917 30.33945586170289 20.541013661809053 51 19.527276560341225 29.682416585413602 29.443061992011476 21.3472448622337 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2939.0 1 3126.0 2 3313.0 3 29713.5 4 56114.0 5 37555.0 6 18996.0 7 19221.5 8 19447.0 9 21180.0 10 22913.0 11 23751.5 12 24590.0 13 24804.0 14 25018.0 15 24482.0 16 23946.0 17 23654.0 18 23362.0 19 21750.0 20 20138.0 21 20208.5 22 20279.0 23 20637.5 24 20996.0 25 24695.0 26 32840.5 27 37287.0 28 40199.5 29 43112.0 30 49233.0 31 55354.0 32 62794.0 33 70234.0 34 79009.5 35 87785.0 36 94868.5 37 101952.0 38 111089.0 39 120226.0 40 137318.0 41 154410.0 42 164095.0 43 173780.0 44 184641.0 45 195502.0 46 206846.5 47 218191.0 48 221524.0 49 224857.0 50 212752.0 51 200647.0 52 178868.5 53 157090.0 54 143789.5 55 130489.0 56 116845.5 57 103202.0 58 92641.0 59 82080.0 60 71489.5 61 60899.0 62 52971.0 63 45043.0 64 37539.5 65 30036.0 66 24559.0 67 19082.0 68 15643.0 69 12204.0 70 10566.5 71 8929.0 72 7497.5 73 6066.0 74 4698.0 75 2724.5 76 2119.0 77 1547.5 78 976.0 79 776.0 80 576.0 81 414.0 82 252.0 83 158.5 84 65.0 85 58.5 86 52.0 87 30.5 88 9.0 89 15.0 90 21.0 91 14.0 92 7.0 93 4.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2656310.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.003210808919704 #Duplication Level Percentage of deduplicated Percentage of total 1 76.33923026091541 16.797081764215843 2 7.530513862071593 3.313909680133067 3 2.9928409488618275 1.975563309461222 4 1.8134869791311619 1.596101452042157 5 1.2358013591075845 1.3595798911196835 6 0.8751920994372954 1.1554221757331895 7 0.6769732043795145 1.042690888956664 8 0.5616184581536648 0.9885927463148431 9 0.4672280537625658 0.9252465626501106 >10 5.289348493613523 27.595448424011153 >50 1.7463076553627659 27.14108296793872 >100 0.46677886187976 13.384584317398987 >500 0.00242654394541821 0.33907580006769555 >1k 0.0020798948103584653 0.8977442732643744 >5k 0.0 0.0 >10k+ 1.7332456752987212E-4 1.4878757466922816 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39014 1.4687291769409443 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTT 4182 0.15743644378856383 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCT 2949 0.11101866875477637 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTC 2796 0.1052587988600728 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.7646208462114736E-5 0.0 0.0 0.04705776057764342 0.0 2 3.7646208462114736E-5 0.0 0.0 0.12995471161122008 0.0 3 3.7646208462114736E-5 0.0 0.0 0.2718056250964684 0.0 4 3.7646208462114736E-5 0.0 0.0 0.4458440468168248 0.0 5 3.7646208462114736E-5 0.0 0.0 0.771370811388731 0.0 6 3.7646208462114736E-5 0.0 0.0 1.5382617239704703 0.0 7 3.7646208462114736E-5 0.0 0.0 1.9914467814374075 0.0 8 3.7646208462114736E-5 0.0 0.0 2.875379756127862 0.0 9 3.7646208462114736E-5 0.0 0.0 3.3748696500032 0.0 10 3.7646208462114736E-5 0.0 0.0 3.917916207069205 0.0 11 3.7646208462114736E-5 0.0 0.0 4.333643287116338 0.0 12 3.7646208462114736E-5 0.0 0.0 4.666134600253735 0.0 13 3.7646208462114736E-5 0.0 0.0 4.881772082324729 0.0 14 3.7646208462114736E-5 0.0 0.0 5.021477161927637 0.0 15 3.7646208462114736E-5 0.0 0.0 5.128618271210815 0.0 16 3.7646208462114736E-5 0.0 0.0 5.275589069046911 0.0 17 3.7646208462114736E-5 0.0 0.0 5.450154537685737 0.0 18 3.7646208462114736E-5 0.0 0.0 5.662592092037451 0.0 19 3.7646208462114736E-5 0.0 0.0 5.814494543182083 0.0 20 3.7646208462114736E-5 0.0 0.0 5.9730227270160485 0.0 21 3.7646208462114736E-5 0.0 0.0 6.144275329310209 0.0 22 3.7646208462114736E-5 0.0 0.0 6.346021360458681 0.0 23 3.7646208462114736E-5 0.0 0.0 6.561847073571985 0.0 24 3.7646208462114736E-5 0.0 0.0 6.740290101682409 0.0 25 3.7646208462114736E-5 0.0 0.0 6.889293794775459 0.0 26 3.7646208462114736E-5 0.0 0.0 7.0377327947415775 0.0 27 3.7646208462114736E-5 0.0 0.0 7.196486855826316 0.0 28 3.7646208462114736E-5 0.0 0.0 7.366195963573529 0.0 29 3.7646208462114736E-5 0.0 0.0 7.557815164645692 0.0 30 3.7646208462114736E-5 0.0 0.0 7.8144117215234665 0.0 31 3.7646208462114736E-5 0.0 0.0 8.01472719675038 0.0 32 3.7646208462114736E-5 0.0 0.0 8.219484924575822 0.0 33 3.7646208462114736E-5 0.0 0.0 8.413024082279554 0.0 34 3.7646208462114736E-5 0.0 0.0 8.613979543050322 0.0 35 3.7646208462114736E-5 0.0 0.0 8.83379575426061 0.0 36 3.7646208462114736E-5 0.0 0.0 9.041640471179946 0.0 37 3.7646208462114736E-5 0.0 0.0 9.254906242117825 0.0 38 3.7646208462114736E-5 0.0 0.0 9.504651189055494 0.0 39 3.7646208462114736E-5 0.0 0.0 9.867146530337196 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCGC 25 3.8921935E-5 44.999996 34 CGTTTTT 19525 0.0 43.236874 1 TAACGCG 45 1.9299478E-8 40.0 1 TATTGCG 215 0.0 38.720932 1 CGTTAGG 355 0.0 38.661972 2 TAGGGAC 3500 0.0 38.314285 5 CGACCCG 525 0.0 37.714283 32 TATGGGA 3620 0.0 37.665745 4 CGAGGGA 1915 0.0 37.59791 4 TAGGGAT 5285 0.0 37.251656 5 TAGGGCG 980 0.0 37.19388 5 ATAGGGA 4700 0.0 37.101063 4 CACGACC 655 0.0 37.099236 27 AGGGATT 6120 0.0 36.985294 6 GTTTTTT 23160 0.0 36.85881 2 ACGGGAT 1635 0.0 36.74312 5 TAAGGGA 3895 0.0 36.73941 4 GGGCGAT 4615 0.0 36.663055 7 GGCGATT 1235 0.0 36.072876 8 TACGGGA 1285 0.0 36.070038 4 >>END_MODULE