##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547429_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 944183 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17600507528731 31.0 31.0 33.0 30.0 34.0 2 31.572181452112567 31.0 31.0 34.0 30.0 34.0 3 31.654985315346707 31.0 31.0 34.0 30.0 34.0 4 35.44197046547121 37.0 35.0 37.0 33.0 37.0 5 35.30344117612793 37.0 35.0 37.0 33.0 37.0 6 35.3704546682158 37.0 35.0 37.0 33.0 37.0 7 35.82982112577752 37.0 35.0 37.0 35.0 37.0 8 35.870728449887366 37.0 35.0 37.0 35.0 37.0 9 37.61598969691257 39.0 37.0 39.0 35.0 39.0 10 36.890705509419256 39.0 37.0 39.0 32.0 39.0 11 36.554836297624504 39.0 35.0 39.0 32.0 39.0 12 35.75267930051695 37.0 35.0 39.0 31.0 39.0 13 35.368643578628294 37.0 35.0 39.0 30.0 39.0 14 36.421846188715534 38.0 35.0 41.0 31.0 41.0 15 36.73287275877664 38.0 35.0 41.0 31.0 41.0 16 36.8764476801637 38.0 35.0 41.0 32.0 41.0 17 36.81779591456317 38.0 35.0 41.0 32.0 41.0 18 36.73136034010356 38.0 35.0 40.0 31.0 41.0 19 36.601280683935215 38.0 35.0 40.0 31.0 41.0 20 36.41823777805786 38.0 35.0 40.0 31.0 41.0 21 36.28855952712557 38.0 35.0 40.0 31.0 41.0 22 36.17871959143513 37.0 35.0 40.0 30.0 41.0 23 36.13083162903801 37.0 35.0 40.0 31.0 41.0 24 36.001600325360656 37.0 35.0 40.0 30.0 41.0 25 35.847676774523585 37.0 34.0 40.0 30.0 41.0 26 35.66957994371854 36.0 34.0 40.0 30.0 41.0 27 35.55703608304746 36.0 34.0 40.0 30.0 41.0 28 35.49523450432808 36.0 34.0 40.0 30.0 41.0 29 35.488978301875804 36.0 34.0 40.0 30.0 41.0 30 35.423008039755004 36.0 34.0 40.0 29.0 41.0 31 35.27221629705259 36.0 34.0 40.0 29.0 41.0 32 35.06541952142752 36.0 34.0 40.0 28.0 41.0 33 34.94204619231653 36.0 34.0 40.0 27.0 41.0 34 34.81644554074793 36.0 34.0 40.0 26.0 41.0 35 34.67357281374479 35.0 34.0 40.0 26.0 41.0 36 34.55755081377233 35.0 33.0 40.0 25.0 41.0 37 34.4652307868284 35.0 33.0 40.0 24.0 41.0 38 34.39695906407974 35.0 33.0 40.0 24.0 41.0 39 34.3571203887382 35.0 33.0 40.0 24.0 41.0 40 34.22710745692307 35.0 33.0 40.0 23.0 41.0 41 34.1697351043177 35.0 33.0 40.0 23.0 41.0 42 34.11054954389139 35.0 33.0 40.0 23.0 41.0 43 34.0357811991955 35.0 33.0 40.0 23.0 41.0 44 33.89177415818755 35.0 33.0 40.0 23.0 41.0 45 33.74131497813453 35.0 33.0 40.0 23.0 41.0 46 33.70388155685921 35.0 33.0 39.0 23.0 41.0 47 33.64469175996602 35.0 33.0 39.0 23.0 41.0 48 33.56606187571689 35.0 33.0 39.0 23.0 41.0 49 33.52021165388489 35.0 33.0 39.0 23.0 41.0 50 33.341425338096535 35.0 33.0 39.0 23.0 41.0 51 32.7941214785693 35.0 32.0 38.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 1.0 13 3.0 14 10.0 15 25.0 16 86.0 17 216.0 18 553.0 19 1065.0 20 1876.0 21 2938.0 22 4442.0 23 6508.0 24 9529.0 25 13204.0 26 16453.0 27 19116.0 28 21080.0 29 24300.0 30 28354.0 31 34211.0 32 41939.0 33 53877.0 34 89609.0 35 137869.0 36 82018.0 37 81131.0 38 106435.0 39 167223.0 40 108.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.26618462734449 25.373682855971776 28.337409167502486 15.02272334918125 2 31.33492130233228 26.089857580574954 29.340604522640206 13.23461659445256 3 27.232009049093236 26.41903105647952 32.840773451756704 13.508186442670542 4 24.947812023728453 28.34471707285558 32.64960288418665 14.057868019229321 5 22.750674392570083 32.95145114877095 31.079991908348276 13.217882550310692 6 19.69120392974667 41.52055268946804 28.064686612658775 10.723556768126517 7 86.07070875031641 4.0580057044026425 8.025139194414642 1.8461463508663047 8 86.53629645947872 3.489048203579179 7.448767876566301 2.5258874603757957 9 82.05072533608421 5.659919740135122 9.522942056783485 2.766412866997182 10 47.785757633848526 25.9779089434993 14.564019898684894 11.672313523967281 11 39.57114245861237 23.592778094924395 21.90602881009296 14.930050636370279 12 36.11217316981983 24.39145801184728 24.915932610521477 14.58043620781141 13 19.95672449090907 39.94236286821516 25.547801644384617 14.553110996491148 14 14.75910919811096 42.35736080823315 27.963752789448655 14.919777204207236 15 12.979793112140337 27.775018190329632 44.355702231453016 14.88948646607702 16 14.841190743743532 23.61565501602973 43.491357078024066 18.051797162202664 17 14.587850024836287 25.977485296812162 28.01342536351534 31.421239314836214 18 19.369762005882336 28.19146288378418 32.63096242995267 19.807812680380817 19 25.071093209684985 30.101050326049084 25.047157171861812 19.780699292404123 20 27.21029715637752 28.19389885223521 24.645222377441662 19.9505816139456 21 19.7603642514216 33.402105312211724 27.60195851863463 19.23557191773205 22 21.37297536600426 29.202495702633918 25.078189291694514 24.34633963966731 23 17.35458062684882 34.34005907753052 24.844124497051947 23.461235798568712 24 18.005619673304857 29.02075127385263 36.231111977233226 16.742517075609285 25 16.369390255914375 30.361804861981206 33.5350244603006 19.73378042180382 26 15.58945670489725 37.54251029726229 27.070705572966258 19.797327424874204 27 16.61817677293491 37.14163461955998 27.603547193711385 18.636641413793726 28 14.903149071737154 32.93609395636227 34.70270064171882 17.458056330181755 29 15.944048982029969 28.876923223570007 33.90921039671335 21.269817397686676 30 18.423864865179738 34.048484245109265 29.09086480057362 18.43678608913738 31 26.40706303756793 30.838195561665483 23.319843716737115 19.434897684029472 32 27.602276253649983 30.979163996809937 24.7744346170181 16.644125132521978 33 24.455746396620146 31.22869189553296 23.9117840503377 20.40377765750919 34 19.269675476046487 31.350702141428094 26.913850387054204 22.46577199547122 35 18.259595862242804 30.36614724052435 30.091412363916742 21.282844533316105 36 25.96636457127485 30.74192185201386 25.00521614983536 18.286497426875933 37 18.21744301687279 36.060064627302125 28.06934672621727 17.65314562960782 38 18.116403281990888 36.801022683102744 24.69680136160045 20.385772673305915 39 17.634928822060978 35.95510616056421 26.29066611027735 20.11929890709746 40 21.77872298060863 30.756431751048265 25.764179189839258 21.70066607850385 41 15.783169152590123 29.862431329519808 27.286977206749114 27.067422311140955 42 20.259420048867646 31.3935963685006 24.27495517288492 24.07202840974684 43 20.653623291247566 31.12712260229214 25.797223631435855 22.42203047502444 44 18.893900864556976 34.08767156366933 27.074094746463345 19.944332825310347 45 16.709366722340903 38.68021347556565 23.148902278477795 21.461517523615655 46 21.052168912170625 34.86114450270763 25.869137656577166 18.217548928544574 47 20.909717713621195 31.57311665217442 25.614843732623864 21.90232190158052 48 20.269587569358908 29.71595548744258 29.309254667792157 20.705202275406357 49 19.744159765638653 28.28784250510759 30.125727745574743 21.84226998367901 50 17.519379188144672 34.76518852807136 27.701515490111557 20.01391679367241 51 17.013121397017315 35.16129818054339 25.806649770224627 22.018930652214667 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2478.0 1 2129.5 2 1781.0 3 8836.0 4 15891.0 5 10132.0 6 4373.0 7 5470.5 8 6568.0 9 8690.5 10 10813.0 11 12317.0 12 13821.0 13 13899.0 14 13977.0 15 12620.0 16 11263.0 17 9968.5 18 8674.0 19 7708.5 20 6743.0 21 6342.5 22 5942.0 23 6223.0 24 6504.0 25 6457.5 26 6707.0 27 7003.0 28 8366.5 29 9730.0 30 12781.0 31 15832.0 32 17019.0 33 18206.0 34 21078.5 35 23951.0 36 25208.0 37 26465.0 38 30935.5 39 35406.0 40 46888.0 41 58370.0 42 68881.5 43 79393.0 44 86183.0 45 92973.0 46 92553.5 47 92134.0 48 90272.0 49 88410.0 50 79442.0 51 70474.0 52 62498.5 53 54523.0 54 47842.5 55 41162.0 56 35855.0 57 30548.0 58 27486.5 59 24425.0 60 21714.0 61 19003.0 62 15694.0 63 12385.0 64 10708.5 65 9032.0 66 7861.5 67 6691.0 68 5711.0 69 4731.0 70 4092.0 71 3453.0 72 2603.0 73 1753.0 74 1423.0 75 982.0 76 871.0 77 702.5 78 534.0 79 375.0 80 216.0 81 142.0 82 68.0 83 50.5 84 33.0 85 31.5 86 30.0 87 21.5 88 13.0 89 12.0 90 11.0 91 8.5 92 6.0 93 11.0 94 16.0 95 8.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 944183.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.160861185286116 #Duplication Level Percentage of deduplicated Percentage of total 1 76.66307845703952 17.75582918180191 2 8.373858541691108 3.8789155053866033 3 3.528644909335372 2.451793647518492 4 1.9799729226291456 1.8343151204655554 5 1.2712408665070551 1.4721516621116375 6 0.8356764374148413 1.1612991577667748 7 0.600513472698976 0.9735886426752561 8 0.44364885708516677 0.8220231675168308 9 0.3446535760796908 0.718422626933475 >10 3.708944529077238 20.139921346587478 >50 1.6150281184483521 26.8508160959238 >100 0.6264239498276605 19.001343996356454 >500 0.006929468471544916 1.045982842083105 >1k 9.239291295393222E-4 0.4736667391470853 >5k 0.0 0.0 >10k+ 4.619645647696611E-4 1.4199302677255408 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13271 1.4055537962450075 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2257 0.23904264321641036 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2170 0.22982832777120538 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0591167178396561E-4 0.0 0.0 0.0902367443599387 0.0 2 1.0591167178396561E-4 0.0 0.0 0.3020600879278699 0.0 3 1.0591167178396561E-4 0.0 0.0 0.49037104035976076 0.0 4 1.0591167178396561E-4 0.0 0.0 0.8091651724294973 0.0 5 1.0591167178396561E-4 0.0 0.0 1.4053419729014396 0.0 6 1.0591167178396561E-4 0.0 0.0 2.3962515741122217 0.0 7 1.0591167178396561E-4 0.0 0.0 2.98056626734436 0.0 8 1.0591167178396561E-4 0.0 0.0 4.135427136476721 0.0 9 1.0591167178396561E-4 0.0 0.0 4.6333179055331435 0.0 10 1.0591167178396561E-4 0.0 0.0 5.253960302187182 0.0 11 1.0591167178396561E-4 0.0 0.0 5.9235338912054125 0.0 12 1.0591167178396561E-4 0.0 0.0 6.4044787927764 0.0 13 1.0591167178396561E-4 0.0 0.0 6.633671650516902 0.0 14 1.0591167178396561E-4 0.0 0.0 6.734393650383454 0.0 15 1.0591167178396561E-4 0.0 0.0 6.8526969877661426 0.0 16 1.0591167178396561E-4 0.0 0.0 7.102436709832734 0.0 17 1.0591167178396561E-4 0.0 0.0 7.376536116409636 0.0 18 1.0591167178396561E-4 0.0 0.0 7.728056955060619 0.0 19 1.0591167178396561E-4 0.0 0.0 7.8952914848075 0.0 20 3.177350153518968E-4 0.0 0.0 8.058925017713728 0.0 21 3.177350153518968E-4 0.0 0.0 8.293095724028076 0.0 22 3.177350153518968E-4 0.0 0.0 8.5122269729491 0.0 23 3.177350153518968E-4 0.0 0.0 8.763555370092451 0.0 24 3.177350153518968E-4 0.0 0.0 8.96171610800025 0.0 25 3.177350153518968E-4 0.0 0.0 9.120265880660847 0.0 26 3.177350153518968E-4 0.0 0.0 9.261234315805305 0.0 27 3.177350153518968E-4 0.0 0.0 9.399660870826947 0.0 28 3.177350153518968E-4 0.0 0.0 9.551855943180506 0.0 29 3.177350153518968E-4 0.0 0.0 9.7071224540158 0.0 30 3.177350153518968E-4 0.0 0.0 9.929536964762129 0.0 31 3.177350153518968E-4 0.0 0.0 10.1146705670405 0.0 32 3.177350153518968E-4 0.0 0.0 10.274279456418936 0.0 33 3.177350153518968E-4 0.0 0.0 10.428169115521039 0.0 34 3.177350153518968E-4 0.0 0.0 10.596886408672894 0.0 35 3.177350153518968E-4 0.0 0.0 10.811357544035426 0.0 36 3.177350153518968E-4 0.0 0.0 10.983781745699721 0.0 37 3.177350153518968E-4 0.0 0.0 11.159595120861104 0.0 38 3.177350153518968E-4 0.0 0.0 11.325982357233714 0.0 39 3.177350153518968E-4 0.0 0.0 11.499147940600498 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 35 1.2116107E-7 45.000004 1 TCGATAG 55 1.8189894E-12 45.000004 1 GTTACAT 35 1.2116107E-7 45.000004 32 AATAGTC 35 1.2116107E-7 45.000004 34 CGAACGA 25 3.890275E-5 45.0 18 GATCGTC 20 7.032646E-4 45.0 9 TCGATTG 25 3.890275E-5 45.0 1 CGACACC 20 7.032646E-4 45.0 17 TCGATAA 20 7.032646E-4 45.0 14 CGTTCCG 25 3.890275E-5 45.0 14 CCGTCAC 20 7.032646E-4 45.0 32 ATCCGTC 40 6.8121153E-9 45.0 28 TACGCGC 20 7.032646E-4 45.0 34 CTACGAT 50 2.1827873E-11 45.0 42 TACGAAG 50 2.1827873E-11 45.0 1 CCGAGTT 20 7.032646E-4 45.0 41 GTCGTCA 20 7.032646E-4 45.0 9 GGTATCG 25 3.890275E-5 45.0 1 CGTAATT 20 7.032646E-4 45.0 39 CCGGTCA 20 7.032646E-4 45.0 31 >>END_MODULE