##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547427_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1788572 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251776836493022 31.0 31.0 33.0 30.0 34.0 2 31.653364248126437 31.0 31.0 34.0 30.0 34.0 3 31.806480253520686 31.0 31.0 34.0 30.0 34.0 4 35.552097986550166 37.0 35.0 37.0 33.0 37.0 5 35.41541184811123 37.0 35.0 37.0 33.0 37.0 6 35.470321574977135 37.0 35.0 37.0 33.0 37.0 7 35.88294236966698 37.0 35.0 37.0 35.0 37.0 8 35.926855614423125 37.0 35.0 37.0 35.0 37.0 9 37.713371337581044 39.0 37.0 39.0 35.0 39.0 10 36.92745050241198 39.0 37.0 39.0 32.0 39.0 11 36.670820073220426 39.0 35.0 39.0 32.0 39.0 12 35.99569321223859 37.0 35.0 39.0 32.0 39.0 13 35.63708925332612 37.0 35.0 39.0 30.0 39.0 14 36.70459170779818 38.0 35.0 41.0 31.0 41.0 15 36.96283403743322 38.0 35.0 41.0 32.0 41.0 16 37.08557161802824 38.0 35.0 41.0 32.0 41.0 17 37.022404465685476 38.0 35.0 41.0 32.0 41.0 18 36.949753210941466 38.0 35.0 41.0 32.0 41.0 19 36.8981550644872 38.0 35.0 41.0 32.0 41.0 20 36.7552958449534 38.0 35.0 41.0 31.0 41.0 21 36.63869276719081 38.0 35.0 40.0 31.0 41.0 22 36.55162218798013 38.0 35.0 40.0 31.0 41.0 23 36.530228584591505 38.0 35.0 40.0 31.0 41.0 24 36.411948750176116 38.0 35.0 40.0 31.0 41.0 25 36.309371945887555 38.0 35.0 40.0 31.0 41.0 26 36.15568453492507 38.0 35.0 40.0 30.0 41.0 27 36.08356107553959 38.0 35.0 40.0 30.0 41.0 28 36.05142985577321 38.0 35.0 40.0 30.0 41.0 29 36.10677400742045 38.0 35.0 40.0 30.0 41.0 30 36.08644158580141 38.0 35.0 40.0 30.0 41.0 31 35.96727556956052 38.0 35.0 40.0 30.0 41.0 32 35.86668191160322 38.0 34.0 40.0 30.0 41.0 33 35.74554057650461 38.0 34.0 40.0 30.0 41.0 34 35.66052974104481 38.0 34.0 40.0 29.0 41.0 35 35.52595590225051 38.0 34.0 40.0 29.0 41.0 36 35.45403483896651 38.0 34.0 40.0 28.0 41.0 37 35.36740595290544 37.0 34.0 40.0 28.0 41.0 38 35.34047944393628 37.0 34.0 40.0 28.0 41.0 39 35.284081937992994 37.0 34.0 40.0 27.0 41.0 40 35.166135889413454 37.0 34.0 40.0 27.0 41.0 41 35.1231395772717 37.0 34.0 40.0 27.0 41.0 42 35.10012736417656 37.0 34.0 40.0 27.0 41.0 43 35.06847250208546 37.0 34.0 40.0 27.0 41.0 44 34.96885616010985 37.0 34.0 40.0 27.0 41.0 45 34.84398335655484 37.0 34.0 40.0 26.0 41.0 46 34.822752452794745 37.0 34.0 40.0 26.0 41.0 47 34.7675005535142 36.0 34.0 40.0 26.0 41.0 48 34.71597676805854 36.0 34.0 40.0 26.0 41.0 49 34.69262014612775 36.0 34.0 40.0 26.0 41.0 50 34.54737466537551 36.0 34.0 40.0 26.0 41.0 51 33.97902237091937 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 4.0 13 3.0 14 13.0 15 44.0 16 111.0 17 310.0 18 627.0 19 1334.0 20 2309.0 21 3630.0 22 5750.0 23 8954.0 24 13097.0 25 18381.0 26 24437.0 27 29425.0 28 33797.0 29 39866.0 30 48121.0 31 58844.0 32 72673.0 33 95349.0 34 158115.0 35 238429.0 36 132685.0 37 159841.0 38 234045.0 39 408150.0 40 223.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.620125999959747 24.900814728174208 30.144551072028413 14.334508199837636 2 28.23543027622036 26.697779010294248 31.657266243684905 13.409524469800488 3 27.60694006168049 26.767163972152087 32.22436670148029 13.401529264687136 4 24.89237223885871 28.286308854214425 32.26529320597661 14.556025700950256 5 22.34408231818456 32.19775329145263 30.97191502494728 14.486249365415539 6 20.615943892669684 41.22769449594425 27.10022297117477 11.056138640211296 7 88.79989175722308 3.6701905207059036 5.90459875252436 1.625318969546655 8 90.10394884857864 2.3568522821558204 5.130405709135556 2.408793160129981 9 86.39534779701349 3.636308742393373 7.476467259914614 2.49187620067853 10 43.46445096982397 24.612875523042966 15.937407048751743 15.985266458381323 11 38.32828647658579 25.20071878571285 22.229913025586892 14.24108171211447 12 36.07140221360952 22.04585557640397 24.216022614689262 17.666719595297252 13 20.74397899553387 34.73782436491234 26.2969564546465 18.221240184907288 14 15.925498106869615 37.45200081405724 28.282786491122526 18.339714587950613 15 15.110210827408682 26.013769644163055 42.48953914072232 16.386480387705944 16 16.749954712474533 22.530991204156166 42.14630442610082 18.57274965726848 17 17.055393912014726 23.002931947945065 28.849383754190494 31.09229038584972 18 20.235920052421708 25.349776246077877 33.466754483465024 20.947549218035395 19 26.170039562287677 26.658641642606508 26.77912882455948 20.392189970546333 20 28.70547006215014 24.615950601932717 26.34638135898359 20.332197976933553 21 21.5981240900562 29.567889914412167 29.013481145852673 19.82050484967896 22 21.783747033946636 25.35218039866441 27.353329919063924 25.51074264832503 23 20.309833766826273 29.953001612459552 26.60608574885439 23.131078871859785 24 19.81178280773712 24.901821117629037 36.37225675007771 18.914139324556125 25 18.673668155377587 25.492292174986524 33.9462990586904 21.887740610945492 26 17.38258230588425 34.38497303994472 27.506636579349337 20.7258080748217 27 17.553444871103874 33.86528470757677 28.679751220526768 19.90151920079259 28 15.863549244872447 29.969327485837866 35.687408726067495 18.47971454322219 29 16.511943606407794 26.18569450936278 35.057185285244316 22.24517659898511 30 18.867789499108785 30.115030314686802 30.37221873092053 20.64496145528388 31 25.182771507101755 28.703625014816293 25.732483791538723 20.38111968654323 32 27.301612683190836 27.330071140552352 26.15388142048517 19.21443475577164 33 25.830159479182274 28.206300892555625 25.757363975283077 20.206175652979024 34 20.220880121124562 28.090845657876784 27.909192361280393 23.779081859718257 35 20.08322840791425 26.17719610952201 30.674247388419364 23.06532809414438 36 26.768394003707986 26.40329827370662 27.496516774275793 19.331790948309603 37 20.020049514361176 30.473025407979105 30.25279384894765 19.25413122871207 38 21.608243895129746 30.47979058153655 26.033673791158535 21.878291732175164 39 20.663747391773995 28.973728762386976 29.434599222172775 20.927924623666254 40 23.351310430891235 26.19922485647768 28.495022845040623 21.954441867590457 41 17.847366502438817 25.553570110680475 30.377474320295743 26.22158906658496 42 22.438179732210948 26.535638487016456 27.022675072627774 24.003506708144823 43 22.04518465010075 26.282475628602036 28.253153912730376 23.419185808566834 44 20.728212227408235 29.63134836059158 27.805366515857344 21.835072896142847 45 19.08013767407742 32.753336181042755 25.316453573018027 22.850072571861798 46 22.311933766155345 30.2303737283151 26.67256336339829 20.785129142131265 47 21.03258912696833 27.890853708992424 27.797259489693456 23.27929767434579 48 21.729961108638623 25.370239498326043 30.773768123396767 22.12603126963857 49 21.342221615903636 24.870175760327236 31.12237024844401 22.66523237532512 50 19.816367470809116 29.84034190404412 28.700661756977077 21.64262886816969 51 18.55871611542616 30.97208275652308 26.309424501781308 24.15977662626945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2081.0 1 2315.0 2 2549.0 3 8238.5 4 13928.0 5 9539.5 6 5151.0 7 5623.5 8 6096.0 9 6895.5 10 7695.0 11 8166.0 12 8637.0 13 8539.5 14 8442.0 15 7852.0 16 7262.0 17 7194.5 18 7127.0 19 6802.0 20 6477.0 21 7217.5 22 7958.0 23 8253.0 24 8548.0 25 10698.0 26 15339.0 27 17830.0 28 21684.5 29 25539.0 30 30798.0 31 36057.0 32 38826.5 33 41596.0 34 46379.0 35 51162.0 36 50651.0 37 50140.0 38 61232.5 39 72325.0 40 95414.0 41 118503.0 42 136482.0 43 154461.0 44 155707.0 45 156953.0 46 155068.5 47 153184.0 48 159816.5 49 166449.0 50 163025.5 51 159602.0 52 147413.0 53 135224.0 54 118206.0 55 101188.0 56 86177.0 57 71166.0 58 66232.0 59 61298.0 60 52078.5 61 42859.0 62 36618.0 63 30377.0 64 23914.0 65 17451.0 66 13180.0 67 8909.0 68 6497.0 69 4085.0 70 3492.0 71 2899.0 72 2493.0 73 2087.0 74 1539.0 75 762.5 76 534.0 77 402.5 78 271.0 79 334.5 80 398.0 81 266.5 82 135.0 83 104.5 84 74.0 85 43.5 86 13.0 87 9.5 88 6.0 89 5.5 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1788572.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.463269200717868 #Duplication Level Percentage of deduplicated Percentage of total 1 77.74830707529598 13.577396163559715 2 8.865781535880911 3.096510592716845 3 3.154250168977853 1.652505594818102 4 1.5368641888051573 1.073546922161894 5 0.9285514823491936 0.8107772251494796 6 0.6067791596904806 0.6357808686636142 7 0.4292376173188569 0.5247124443619742 8 0.33995599742298604 0.4749394479516924 9 0.278887990485982 0.4383266449233553 >10 2.970003703015488 12.681509966994179 >50 1.4816859551541388 19.076908246458153 >100 1.6483672532559117 43.6564762146698 >500 0.008091337390808868 0.9073798055028578 >1k 0.0029128814606911926 0.8494463122525507 >5k 3.2365349563235474E-4 0.5437835498158089 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9621 0.537915163605379 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2937 0.16420921271271158 No Hit GAGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT 1918 0.10723638746441294 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1182105053640558E-4 0.0 0.0 0.10572680328217147 0.0 2 1.1182105053640558E-4 0.0 0.0 0.35603822490791537 0.0 3 1.1182105053640558E-4 0.0 0.0 0.5226515902071597 0.0 4 1.1182105053640558E-4 0.0 0.0 0.9527153505701755 0.0 5 1.1182105053640558E-4 0.0 0.0 1.517803029455901 0.0 6 1.1182105053640558E-4 0.0 0.0 2.2765647678706813 0.0 7 1.1182105053640558E-4 0.0 0.0 2.615326640470722 0.0 8 1.1182105053640558E-4 0.0 0.0 3.541987686265915 0.0 9 1.1182105053640558E-4 0.0 0.0 3.8244476599208754 0.0 10 1.1182105053640558E-4 0.0 0.0 4.3812046705416385 0.0 11 1.1182105053640558E-4 0.0 0.0 5.021324274337292 0.0 12 1.1182105053640558E-4 0.0 0.0 5.5002538337847175 0.0 13 1.1182105053640558E-4 0.0 0.0 5.7105333193184284 0.0 14 1.1182105053640558E-4 0.0 0.0 5.783943838995579 0.0 15 1.1182105053640558E-4 0.0 0.0 5.885589173933171 0.0 16 1.1182105053640558E-4 0.0 0.0 6.13137184301219 0.0 17 1.1182105053640558E-4 0.0 0.0 6.401531501108146 0.0 18 1.1182105053640558E-4 0.0 0.0 6.738783789525946 0.0 19 1.1182105053640558E-4 0.0 0.0 6.906235812704213 0.0 20 1.1182105053640558E-4 0.0 0.0 7.0756447042668675 0.0 21 1.1182105053640558E-4 0.0 0.0 7.323719704881883 0.0 22 1.1182105053640558E-4 0.0 0.0 7.588903326228969 0.0 23 1.1182105053640558E-4 0.0 0.0 7.857609310667952 0.0 24 1.1182105053640558E-4 0.0 0.0 8.062800938402257 0.0 25 2.2364210107281117E-4 0.0 0.0 8.232321651015447 0.0 26 2.2364210107281117E-4 0.0 0.0 8.392896679585725 0.0 27 2.2364210107281117E-4 0.0 0.0 8.554757650237173 0.0 28 2.2364210107281117E-4 0.0 0.0 8.719525968202566 0.0 29 2.2364210107281117E-4 0.0 0.0 8.90201792267798 0.0 30 2.2364210107281117E-4 0.0 0.0 9.134773439369509 0.0 31 2.2364210107281117E-4 0.0 0.0 9.342928324943028 0.0 32 2.2364210107281117E-4 0.0 0.0 9.530843600369456 0.0 33 2.2364210107281117E-4 0.0 0.0 9.73329561236562 0.0 34 2.2364210107281117E-4 0.0 0.0 9.924845071934481 0.0 35 2.2364210107281117E-4 0.0 0.0 10.142504746803596 0.0 36 2.2364210107281117E-4 0.0 0.0 10.350995095528724 0.0 37 2.2364210107281117E-4 0.0 0.0 10.562169149466726 0.0 38 2.2364210107281117E-4 0.0 0.0 10.757017330026413 0.0 39 2.2364210107281117E-4 0.0 0.0 10.95057956850493 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 35 1.2124292E-7 45.000004 1 TCGAGTA 35 1.2124292E-7 45.000004 1 TCCATCG 25 3.8916798E-5 45.0 18 GGTCGAA 20 7.03434E-4 45.0 17 CGCGGAT 20 7.03434E-4 45.0 23 ACGTTAG 25 3.8916798E-5 45.0 1 GCGAACG 45 3.8562575E-10 45.0 1 CGTTGCC 25 3.8916798E-5 45.0 16 TAACGCG 40 6.8193913E-9 45.0 1 CGCGAAC 20 7.03434E-4 45.0 40 CGTTAGT 20 7.03434E-4 45.0 31 TACGCGG 110 0.0 45.0 2 CGCTATA 25 3.8916798E-5 45.0 31 CTACGAT 20 7.03434E-4 45.0 39 CGCTAAC 45 3.8562575E-10 45.0 24 GTCGTAA 25 3.8916798E-5 45.0 10 GTCCGAT 25 3.8916798E-5 45.0 8 CGTACGT 20 7.03434E-4 45.0 12 TCCGTCT 20 7.03434E-4 45.0 24 TTACGGC 25 3.8916798E-5 45.0 14 >>END_MODULE