##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547426_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2239511 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.336151061548705 31.0 31.0 33.0 30.0 34.0 2 31.76068614978895 31.0 31.0 34.0 30.0 34.0 3 31.928360700170707 31.0 31.0 34.0 30.0 34.0 4 35.67857760019933 37.0 35.0 37.0 33.0 37.0 5 35.56727026569639 37.0 35.0 37.0 33.0 37.0 6 35.61767412618201 37.0 35.0 37.0 33.0 37.0 7 35.92010621961669 37.0 35.0 37.0 35.0 37.0 8 35.95315004034363 37.0 35.0 37.0 35.0 37.0 9 37.77993945999819 39.0 38.0 39.0 35.0 39.0 10 37.059675973906806 39.0 37.0 39.0 33.0 39.0 11 36.827817769146925 39.0 37.0 39.0 32.0 39.0 12 36.312106080300566 38.0 35.0 39.0 32.0 39.0 13 36.124280255823706 38.0 35.0 39.0 32.0 39.0 14 37.19492246298411 39.0 35.0 41.0 32.0 41.0 15 37.367367251154384 39.0 35.0 41.0 32.0 41.0 16 37.44158345281626 39.0 35.0 41.0 32.0 41.0 17 37.369132815154735 39.0 35.0 41.0 32.0 41.0 18 37.30147563463631 39.0 35.0 41.0 32.0 41.0 19 37.2256586370864 39.0 35.0 41.0 32.0 41.0 20 37.097814210334306 39.0 35.0 41.0 32.0 41.0 21 37.02730819361906 39.0 35.0 41.0 32.0 41.0 22 36.95170910078138 39.0 35.0 41.0 31.0 41.0 23 36.885240572607145 38.0 35.0 41.0 31.0 41.0 24 36.80116328966457 38.0 35.0 41.0 31.0 41.0 25 36.69681015185905 38.0 35.0 40.0 31.0 41.0 26 36.58258476962158 38.0 35.0 40.0 31.0 41.0 27 36.51169384745152 38.0 35.0 40.0 31.0 41.0 28 36.447014102632224 38.0 35.0 40.0 31.0 41.0 29 36.470000370616624 38.0 35.0 40.0 31.0 41.0 30 36.43127673853801 38.0 35.0 40.0 31.0 41.0 31 36.307200991645054 38.0 35.0 40.0 30.0 41.0 32 36.230639635170355 38.0 35.0 40.0 30.0 41.0 33 36.15584027048762 38.0 35.0 41.0 30.0 41.0 34 36.06719323995283 38.0 35.0 41.0 30.0 41.0 35 35.96488876366314 38.0 35.0 41.0 30.0 41.0 36 35.88291327883632 38.0 35.0 41.0 29.0 41.0 37 35.830788506955315 38.0 35.0 41.0 29.0 41.0 38 35.7331774659736 38.0 35.0 40.0 29.0 41.0 39 35.67785646062913 38.0 35.0 40.0 29.0 41.0 40 35.568653156872195 38.0 34.0 40.0 28.0 41.0 41 35.476844721905806 38.0 34.0 40.0 28.0 41.0 42 35.427171378037436 38.0 34.0 40.0 27.0 41.0 43 35.3768599484441 38.0 34.0 40.0 27.0 41.0 44 35.25874934304855 38.0 34.0 40.0 27.0 41.0 45 35.11841111742697 37.0 34.0 40.0 27.0 41.0 46 35.10912828738059 37.0 34.0 40.0 27.0 41.0 47 35.07068462713512 37.0 34.0 40.0 27.0 41.0 48 35.00483141185732 37.0 34.0 40.0 27.0 41.0 49 34.93926218714711 37.0 34.0 40.0 26.0 41.0 50 34.824572417818 37.0 34.0 40.0 26.0 41.0 51 34.25596837881127 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 0.0 12 5.0 13 11.0 14 20.0 15 48.0 16 141.0 17 331.0 18 730.0 19 1551.0 20 2640.0 21 4322.0 22 6900.0 23 10108.0 24 15041.0 25 21523.0 26 28342.0 27 33545.0 28 38120.0 29 44722.0 30 54307.0 31 66395.0 32 83134.0 33 108039.0 34 176533.0 35 255375.0 36 171643.0 37 215914.0 38 325168.0 39 574612.0 40 287.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.9270541649494 24.56143327717524 29.113051911778953 13.398460646096403 2 30.07875379937853 25.194071384333455 30.985692858842846 13.741481957445176 3 28.253087392738863 25.623182918056663 32.073921494469104 14.04980819473537 4 24.993938408875866 28.133507716639926 31.54585978814125 15.326694086342957 5 23.255969718389416 31.95688701685323 30.557161808984194 14.229981455773158 6 20.404945543915616 41.71232023419398 26.917126104761262 10.965608117129142 7 89.94048254284083 3.4424479272484034 5.325448278664405 1.2916212512463658 8 91.44165846919262 2.449775866249373 4.597074986459098 1.5114906780989243 9 87.84841869497404 3.8654420540912726 6.27203885133853 2.014100399596162 10 40.79524503340238 27.587451010510776 15.856229328634688 15.761074627452153 11 35.000453223940404 26.08681091541859 23.255791107969554 15.656944752671453 12 32.872711944705785 23.3479094320144 25.701101713722323 18.078276909557488 13 22.915270342498875 31.19408656621914 27.12051872038137 18.77012437090061 14 18.905466416552542 33.44261314188678 28.748240129206774 18.903680312353902 15 18.169725444527845 26.418803033340758 37.30100008439342 18.11047143773797 16 21.15497534952943 23.506962010903273 36.3139542516201 19.024108387947187 17 21.124477620337654 23.97036674524037 28.525736198661228 26.379419435760752 18 23.665166190297793 25.39438297021091 31.111211331402256 19.829239508089042 19 26.531952734324594 27.368921161807197 25.44309896222881 20.656027141639402 20 28.035852469579297 27.030365110955024 26.06372551865117 18.870056900814507 21 24.153487078205913 29.076392123101876 27.93882235898819 18.831298439704025 22 24.27503146892335 24.44797100795665 27.671665823476644 23.605331699643358 23 21.67794665889116 29.31622126437423 26.95217839965957 22.05365367707504 24 21.453924539776764 26.1349910761769 33.85274731849944 18.558337065546898 25 20.765827897250784 27.10350607788932 30.58319427767937 21.54747174718052 26 19.574005218103416 31.752467391318905 26.734854171290074 21.9386732192876 27 19.439199003711078 30.970957499204065 29.04509064702071 20.544752850064143 28 17.627151641586043 29.3183645894126 33.46936005226141 19.58512371673995 29 19.047059826899712 26.801118637059606 32.82216519588428 21.3296563401564 30 20.721889733964243 29.4000342038954 30.371898150980282 19.50617791116007 31 25.499316591880994 27.9448504606586 27.1384690675777 19.417363879882707 32 26.067029811418653 27.493814497897084 27.220317292480367 19.218838398203893 33 24.95276870709722 29.08349188729147 25.89333117810093 20.07040822751038 34 20.683399188483556 27.855857818961372 29.221066563191695 22.239676429363374 35 20.522962378840738 27.522347512470358 30.07357409720247 21.881116011486437 36 25.52950175283801 28.035629206554468 26.78508835187682 19.649780688730708 37 21.154573476084735 30.794267141353625 28.324397602869556 19.726761779692083 38 21.404181537844646 30.647672639250267 26.232557018027595 21.71558880487749 39 21.090675598378397 29.826377276110723 27.033267530277815 22.049679595233066 40 23.780995047579584 27.207769910484924 27.115294365600345 21.895940676335147 41 19.783158019764137 26.056179228411917 28.5407394739298 25.619923277894145 42 22.47910369719104 27.52743790943648 25.7558904600156 24.23756793335688 43 21.837669026854524 27.243402689247787 26.994017890512705 23.924910393384984 44 21.399939540372877 28.577265304791982 27.962711502645 22.060083652190144 45 19.762707126689712 31.519068225161657 26.35704848067279 22.361176167475847 46 21.81784327024962 29.984626108110206 26.974727965167393 21.222802656472776 47 21.36310114127593 27.92368512590472 28.034378933615418 22.678834799203933 48 21.869417028985346 27.23121252809207 29.73095465929839 21.16841578362419 49 21.916793442854264 26.8835919984318 29.28996553265423 21.909649026059707 50 20.598693196863067 29.889382101717743 28.39776183282868 21.11416286859051 51 19.120736625093603 30.99225679177285 26.981649118937124 22.905357464196424 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2492.0 1 2782.0 2 3072.0 3 10578.0 4 18084.0 5 12604.0 6 7124.0 7 7580.0 8 8036.0 9 8965.0 10 9894.0 11 10327.0 12 10760.0 13 10673.5 14 10587.0 15 10270.5 16 9954.0 17 9389.5 18 8825.0 19 8643.0 20 8461.0 21 8985.0 22 9509.0 23 9179.5 24 8850.0 25 11123.0 26 17064.5 27 20733.0 28 25165.5 29 29598.0 30 34106.0 31 38614.0 32 44756.5 33 50899.0 34 57619.0 35 64339.0 36 70925.0 37 77511.0 38 88498.5 39 99486.0 40 115537.0 41 131588.0 42 155075.0 43 178562.0 44 189217.5 45 199873.0 46 197806.5 47 195740.0 48 192084.5 49 188429.0 50 172760.0 51 157091.0 52 152687.0 53 148283.0 54 137557.5 55 126832.0 56 118940.0 57 111048.0 58 99163.5 59 87279.0 60 77058.5 61 66838.0 62 58151.5 63 49465.0 64 39957.5 65 30450.0 66 24890.0 67 19330.0 68 16033.0 69 12736.0 70 11025.5 71 9315.0 72 8273.5 73 7232.0 74 5719.0 75 3438.5 76 2671.0 77 1995.5 78 1320.0 79 906.5 80 493.0 81 389.5 82 286.0 83 219.0 84 152.0 85 97.0 86 42.0 87 25.5 88 9.0 89 8.5 90 8.0 91 7.0 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2239511.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.458815840389036 #Duplication Level Percentage of deduplicated Percentage of total 1 78.31039065899954 12.88896298245395 2 7.150850336781671 2.3538905759054685 3 2.563144308910844 1.2655896045811441 4 1.3312619086324653 0.8764397835802623 5 0.884055741730877 0.7275255322893518 6 0.6486407632421662 0.640551532126332 7 0.48949276281702897 0.5639529866886096 8 0.4152264415035544 0.5467308426213657 9 0.34214707968129765 0.5068202197321252 >10 4.289219164480754 17.49938877408504 >50 2.0858027525375125 24.903064861722342 >100 1.4829078482263773 35.80643229471407 >500 0.0054881859647648605 0.5658662841845362 >1k 0.001097637192952972 0.3300171552826568 >5k 0.0 0.0 >10k+ 2.74409298238243E-4 0.5247665700327342 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11619 0.5188186170998937 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3404 0.15199746730424632 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.930520993198961E-5 0.0 0.0 0.029381414067624585 0.0 2 8.930520993198961E-5 0.0 0.0 0.07885650036994683 0.0 3 8.930520993198961E-5 0.0 0.0 0.12373236836077162 0.0 4 8.930520993198961E-5 0.0 0.0 0.22219136231079017 0.0 5 8.930520993198961E-5 0.0 0.0 0.3632935940033338 0.0 6 8.930520993198961E-5 0.0 0.0 0.696446679654621 0.0 7 8.930520993198961E-5 0.0 0.0 0.8444700651168938 0.0 8 8.930520993198961E-5 0.0 0.0 1.2673748867498307 0.0 9 8.930520993198961E-5 0.0 0.0 1.4609439292774182 0.0 10 8.930520993198961E-5 0.0 0.0 1.7669482311093805 0.0 11 8.930520993198961E-5 0.0 0.0 2.074024195460527 0.0 12 8.930520993198961E-5 0.0 0.0 2.3079591928773735 0.0 13 8.930520993198961E-5 0.0 0.0 2.4356656430801187 0.0 14 8.930520993198961E-5 0.0 0.0 2.4896952950889726 0.0 15 8.930520993198961E-5 0.0 0.0 2.544975220036874 0.0 16 8.930520993198961E-5 0.0 0.0 2.656517427241929 0.0 17 8.930520993198961E-5 0.0 0.0 2.779535353923245 0.0 18 8.930520993198961E-5 0.0 0.0 2.9371143968482407 0.0 19 8.930520993198961E-5 0.0 0.0 3.0235618400624067 0.0 20 8.930520993198961E-5 0.0 0.0 3.1209491714932414 0.0 21 8.930520993198961E-5 0.0 0.0 3.244770845063945 0.0 22 8.930520993198961E-5 0.0 0.0 3.3785500495420653 0.0 23 8.930520993198961E-5 0.0 0.0 3.5259036459298483 0.0 24 8.930520993198961E-5 0.0 0.0 3.6402589672477608 0.0 25 8.930520993198961E-5 0.0 0.0 3.7392091398524054 0.0 26 8.930520993198961E-5 0.0 0.0 3.835122935319362 0.0 27 8.930520993198961E-5 0.0 0.0 3.9318851302806728 0.0 28 8.930520993198961E-5 0.0 0.0 4.036729446740829 0.0 29 8.930520993198961E-5 0.0 0.0 4.152424346207721 0.0 30 8.930520993198961E-5 0.0 0.0 4.305493476031152 0.0 31 8.930520993198961E-5 0.0 0.0 4.434092978333217 0.0 32 8.930520993198961E-5 0.0 0.0 4.5642553218090915 0.0 33 8.930520993198961E-5 0.0 0.0 4.695578633014082 0.0 34 8.930520993198961E-5 0.0 0.0 4.83261747765472 0.0 35 8.930520993198961E-5 0.0 0.0 4.994304560236587 0.0 36 8.930520993198961E-5 0.0 0.0 5.137639422177431 0.0 37 8.930520993198961E-5 0.0 0.0 5.287002385788683 0.0 38 8.930520993198961E-5 0.0 0.0 5.461058239946131 0.0 39 8.930520993198961E-5 0.0 0.0 5.740137020983599 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACCGT 25 3.8919956E-5 45.0 35 ATCGTAC 30 2.166429E-6 44.999996 40 CGTTTTT 6380 0.0 42.002354 1 TTGCGAA 60 3.6379788E-12 41.249996 18 AACGGGT 315 0.0 40.714287 4 GCGCGAC 670 0.0 40.63433 9 AGGGCGA 1840 0.0 40.23098 6 ACGGGTC 230 0.0 40.1087 5 CGGTCTA 305 0.0 39.836067 31 CGAGGGC 860 0.0 39.767445 4 CGACGGT 300 0.0 39.75 28 ACGCCTA 40 3.4601726E-7 39.375 29 TAAACGG 150 0.0 39.0 2 TAGGGCG 985 0.0 38.60406 5 CTTCGAA 35 6.2509444E-6 38.57143 21 ACGGGTA 315 0.0 38.57143 5 TCCTACG 35 6.2509444E-6 38.57143 39 CGAGGGT 420 0.0 38.57143 4 TAGGGTA 1280 0.0 38.320312 5 AATGGGC 1145 0.0 37.925762 4 >>END_MODULE