##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547425_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1391745 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296008248637502 31.0 31.0 33.0 30.0 34.0 2 31.719327175596103 31.0 31.0 34.0 30.0 34.0 3 31.83991463953526 31.0 31.0 34.0 30.0 34.0 4 35.60438657943804 37.0 35.0 37.0 33.0 37.0 5 35.479818501234064 37.0 35.0 37.0 33.0 37.0 6 35.51240708606821 37.0 35.0 37.0 33.0 37.0 7 35.91021702970013 37.0 35.0 37.0 35.0 37.0 8 35.89004091985242 37.0 35.0 37.0 35.0 37.0 9 37.612411756464006 39.0 37.0 39.0 35.0 39.0 10 36.953502257956735 39.0 37.0 39.0 32.0 39.0 11 36.61680480260392 39.0 35.0 39.0 32.0 39.0 12 36.024819201793434 38.0 35.0 39.0 31.0 39.0 13 35.72001192747235 38.0 35.0 39.0 30.0 39.0 14 36.81028708563709 39.0 35.0 41.0 31.0 41.0 15 37.03976446834729 39.0 35.0 41.0 32.0 41.0 16 37.1501956177317 39.0 35.0 41.0 32.0 41.0 17 37.050272858892974 39.0 35.0 41.0 32.0 41.0 18 36.96499933536675 38.0 35.0 41.0 32.0 41.0 19 36.905971999180885 38.0 35.0 41.0 31.0 41.0 20 36.74393513179498 38.0 35.0 40.0 31.0 41.0 21 36.621115218664336 38.0 35.0 40.0 31.0 41.0 22 36.53086017912764 38.0 35.0 40.0 31.0 41.0 23 36.47629486723502 38.0 35.0 40.0 31.0 41.0 24 36.32555245393373 38.0 35.0 40.0 31.0 41.0 25 36.25546993163259 38.0 35.0 40.0 30.0 41.0 26 36.100638407179474 38.0 35.0 40.0 30.0 41.0 27 35.999236929178835 38.0 35.0 40.0 30.0 41.0 28 36.101956177316964 38.0 35.0 40.0 30.0 41.0 29 36.15589781173994 38.0 35.0 40.0 30.0 41.0 30 36.0980431041606 38.0 35.0 40.0 30.0 41.0 31 35.95748430926643 38.0 35.0 40.0 30.0 41.0 32 35.839832009455755 38.0 34.0 40.0 30.0 41.0 33 35.61686012883107 38.0 34.0 40.0 29.0 41.0 34 35.4271055401672 38.0 34.0 40.0 27.0 41.0 35 35.282715583673735 38.0 34.0 40.0 27.0 41.0 36 35.10857161333434 37.0 34.0 40.0 26.0 41.0 37 35.0298783182264 37.0 34.0 40.0 26.0 41.0 38 34.98662757904645 37.0 34.0 40.0 26.0 41.0 39 34.96916892103079 37.0 34.0 40.0 26.0 41.0 40 34.79198703785536 37.0 34.0 40.0 25.0 41.0 41 34.7211378521209 37.0 34.0 40.0 24.0 41.0 42 34.639337666023586 37.0 33.0 40.0 24.0 41.0 43 34.55962981724382 37.0 33.0 40.0 24.0 41.0 44 34.40417748941078 36.0 33.0 40.0 24.0 41.0 45 34.32481022026305 36.0 33.0 40.0 23.0 41.0 46 34.21945758741724 36.0 33.0 40.0 23.0 41.0 47 34.10637940139896 36.0 33.0 40.0 23.0 41.0 48 34.05770094377921 36.0 33.0 40.0 23.0 41.0 49 33.94369801939292 36.0 33.0 40.0 23.0 41.0 50 33.860988183898634 35.0 33.0 40.0 23.0 41.0 51 33.411092549281655 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 1.0 13 3.0 14 18.0 15 55.0 16 124.0 17 311.0 18 689.0 19 1369.0 20 2390.0 21 3654.0 22 5567.0 23 7942.0 24 11423.0 25 15917.0 26 21701.0 27 26524.0 28 29544.0 29 33566.0 30 39641.0 31 47256.0 32 57691.0 33 74105.0 34 118740.0 35 166580.0 36 107511.0 37 131358.0 38 188374.0 39 299609.0 40 77.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.039953439746505 23.921120607582566 30.055721414483255 14.983204538187673 2 29.52250591882852 26.335212269489023 30.486260054823262 13.656021756859193 3 27.076080747550733 25.913008489342516 33.087742366597325 13.92316839650942 4 24.72715907008827 28.473966136037852 31.674624302584164 15.124250491289711 5 22.719391842614847 32.30505588308203 30.834815285846183 14.140736988456936 6 22.0291073436585 41.83711815023585 26.201495245177814 9.932279260927828 7 89.18192628678385 3.0604025881177948 6.415040111514682 1.3426310135836665 8 89.24034216038139 2.4439103427711255 6.329176681073041 1.9865708157744415 9 84.5954539085824 4.997395356189531 7.913662344754248 2.4934883904738294 10 44.20299695705751 33.36243349176753 12.47901016349978 9.955559387675185 11 35.67420755957449 22.995735569375135 25.48656542685621 15.84349144419416 12 35.302947019748586 20.70566087896849 26.994456599448892 16.996935501834027 13 22.653790744712573 31.317446802395555 28.175348213932867 17.853414238959004 14 17.36798048493079 32.96465947425713 30.068223704773505 19.59913633603857 15 16.97257759144096 25.94246790899195 39.64871438374127 17.436240115825814 16 20.032908327315706 23.96279490855006 37.99137054561001 18.01292621852423 17 19.41275161757362 24.496082256447842 28.82381470743563 27.26735141854291 18 21.529303141020804 25.844533301718347 32.218689486939056 20.40747407032179 19 25.305425922133722 26.690090497900123 27.109204631595585 20.89527894837057 20 27.295301941088347 26.07381380928259 27.99471167491171 18.636172574717353 21 23.608275941354197 28.081293627783825 29.50626731189981 18.804163118962165 22 24.529277992735736 24.056993199185193 28.143086556804587 23.270642251274477 23 21.370294127156914 27.72857096666415 27.881688096598158 23.019446809580778 24 20.843257924404256 25.37232036041085 34.71670456872488 19.06771714646002 25 19.78875440544065 27.354364484873305 31.644230803775113 21.212650305910923 26 19.499118013716593 32.3433531286263 26.999989222163546 21.15753963549357 27 19.350240166122386 31.537170961634498 28.75483655411013 20.35775231813299 28 17.470298079030282 29.311332176512224 33.960172301678824 19.25819744277867 29 18.066240582865394 24.91886085453873 34.04704166352313 22.967856899072746 30 20.488810809451444 28.956453948101124 30.718845765567686 19.835889476879746 31 25.780584805406164 26.28132308720347 27.71614052861695 20.22195157877341 32 26.60940042895789 26.264222253358195 27.535791398567984 19.59058591911593 33 25.146345056026785 26.540565980118487 27.61396663900355 20.699122324851178 34 21.1346906222045 26.39822668664159 29.62381758152535 22.84326510962856 35 20.72542024580652 26.574049125378572 30.36411124164269 22.336419387172217 36 26.090196120697396 26.850967670083243 27.298104178567193 19.760732030652168 37 21.406435805409753 29.524733338362992 30.262152908758427 18.806677947468824 38 20.53206585976598 30.09509644367323 27.40365512360382 21.96918257295697 39 21.04875533951981 29.5809936446691 28.076695084228792 21.293555931582294 40 23.90452273943862 26.279095667669004 27.504320116113224 22.312061476779153 41 18.312837481004063 25.627252118743016 29.589687766077837 26.470222634175084 42 21.30634563084473 25.578608150199926 27.36334601525423 25.751700203701112 43 21.57363597498105 26.15004903915588 28.04630158541974 24.23001340044333 44 20.10885614821681 28.21263952807447 28.809156849853963 22.869347473854766 45 19.826189424068346 31.23345153027315 25.61223499994611 23.328124045712396 46 21.290538137374305 30.731922873802315 27.000995153566205 20.97654383525718 47 20.83485121196771 26.06864044778318 29.09290135764813 24.00360698260098 48 21.634710381571338 25.034111852386754 32.216749476376776 21.11442828966513 49 21.142522516696665 24.866767978329364 31.251342738791948 22.739366766182023 50 19.065920840383836 28.849034844745265 30.022884939410595 22.062159375460304 51 19.0488918587816 28.16097776532339 28.408149481406436 24.38198089448857 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1388.0 1 1911.5 2 2435.0 3 9986.5 4 17538.0 5 11690.0 6 5842.0 7 6118.0 8 6394.0 9 7163.5 10 7933.0 11 8479.5 12 9026.0 13 8830.5 14 8635.0 15 8218.0 16 7801.0 17 7147.5 18 6494.0 19 6465.5 20 6437.0 21 6474.0 22 6511.0 23 6833.0 24 7155.0 25 8357.5 26 11742.5 27 13925.0 28 17329.5 29 20734.0 30 23283.5 31 25833.0 32 29880.5 33 33928.0 34 38181.0 35 42434.0 36 44542.5 37 46651.0 38 51485.0 39 56319.0 40 68685.0 41 81051.0 42 91343.5 43 101636.0 44 106325.0 45 111014.0 46 111699.5 47 112385.0 48 109321.5 49 106258.0 50 103059.0 51 99860.0 52 90804.0 53 81748.0 54 77270.5 55 72793.0 56 71775.5 57 70758.0 58 63405.5 59 56053.0 60 52640.0 61 49227.0 62 42882.5 63 36538.0 64 31307.5 65 26077.0 66 20983.0 67 15889.0 68 13254.0 69 10619.0 70 8813.0 71 7007.0 72 5384.0 73 3761.0 74 3268.0 75 2258.5 76 1742.0 77 1307.5 78 873.0 79 636.5 80 400.0 81 282.5 82 165.0 83 104.5 84 44.0 85 55.0 86 66.0 87 39.5 88 13.0 89 10.5 90 8.0 91 6.0 92 4.0 93 4.5 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1391745.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.01182002426246 #Duplication Level Percentage of deduplicated Percentage of total 1 82.07820937396436 17.246125632794712 2 7.061796836812244 2.967624083660096 3 2.1241274425004875 1.3389535059125146 4 1.029504326085009 0.8652703845559129 5 0.6116566488219619 0.6426009710845284 6 0.39423020290808064 0.4970096442979836 7 0.3058957528149332 0.44991985530335565 8 0.22828165061269373 0.38372903660123875 9 0.2000140452605776 0.3782393209205948 >10 3.0925478247017786 17.27691631803069 >50 1.849907308757974 28.24966588271532 >100 1.0214211967339473 28.404017925458337 >500 0.0017195643042658994 0.2694663082317408 >1k 3.439128608531799E-4 0.17473036559515934 >5k 0.0 0.0 >10k+ 3.439128608531799E-4 0.8557307648378316 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11842 0.8508742621672792 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2418 0.17373872368860677 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.185224304739733E-5 0.0 0.0 0.039446881433021136 0.0 2 7.185224304739733E-5 0.0 0.0 0.21447894549648103 0.0 3 7.185224304739733E-5 0.0 0.0 0.3131320752005576 0.0 4 7.185224304739733E-5 0.0 0.0 0.6023373534663319 0.0 5 7.185224304739733E-5 0.0 0.0 1.0646346852332862 0.0 6 7.185224304739733E-5 0.0 0.0 1.5919582969581354 0.0 7 7.185224304739733E-5 0.0 0.0 1.8397048309855613 0.0 8 7.185224304739733E-5 0.0 0.0 2.316013350146758 0.0 9 7.185224304739733E-5 0.0 0.0 2.472291978774847 0.0 10 7.185224304739733E-5 0.0 0.0 2.730816349259383 0.0 11 7.185224304739733E-5 0.0 0.0 3.1612831373563406 0.0 12 7.185224304739733E-5 0.0 0.0 3.482175254806017 0.0 13 7.185224304739733E-5 0.0 0.0 3.6021685006951705 0.0 14 7.185224304739733E-5 0.0 0.0 3.64635763016932 0.0 15 7.185224304739733E-5 0.0 0.0 3.720149883778997 0.0 16 7.185224304739733E-5 0.0 0.0 3.8902241430721864 0.0 17 7.185224304739733E-5 0.0 0.0 4.0699984551767745 0.0 18 7.185224304739733E-5 0.0 0.0 4.289507057686573 0.0 19 7.185224304739733E-5 0.0 0.0 4.415823300963898 0.0 20 7.185224304739733E-5 0.0 0.0 4.544582520504834 0.0 21 7.185224304739733E-5 0.0 0.0 4.717890130735157 0.0 22 7.185224304739733E-5 0.0 0.0 4.901688168450399 0.0 23 7.185224304739733E-5 0.0 0.0 5.0911625333663855 0.0 24 7.185224304739733E-5 0.0 0.0 5.243632993112962 0.0 25 7.185224304739733E-5 0.0 0.0 5.371098872279045 0.0 26 7.185224304739733E-5 0.0 0.0 5.5006484664935025 0.0 27 7.185224304739733E-5 0.0 0.0 5.620929121354846 0.0 28 7.185224304739733E-5 0.0 0.0 5.743221639021516 0.0 29 2.1555672914219199E-4 0.0 0.0 5.878806821651955 0.0 30 2.1555672914219199E-4 0.0 0.0 6.036953608599276 0.0 31 2.1555672914219199E-4 0.0 0.0 6.184969229276915 0.0 32 2.1555672914219199E-4 0.0 0.0 6.320482559664306 0.0 33 2.1555672914219199E-4 0.0 0.0 6.4612411037941575 0.0 34 2.1555672914219199E-4 0.0 0.0 6.6114122917632185 0.0 35 2.1555672914219199E-4 0.0 0.0 6.7852228676948725 0.0 36 2.1555672914219199E-4 0.0 0.0 6.93604072585136 0.0 37 2.1555672914219199E-4 0.0 0.0 7.0921756499933535 0.0 38 2.1555672914219199E-4 0.0 0.0 7.256214320870562 0.0 39 2.1555672914219199E-4 0.0 0.0 7.426288580163751 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 50 2.1827873E-11 45.0 25 CTATCGA 25 3.8912323E-5 45.0 43 TAGCGCG 20 7.0338E-4 45.0 1 TAACGCG 40 6.8175723E-9 45.0 1 TCGATCA 20 7.0338E-4 45.0 17 CATTACG 25 3.8912323E-5 45.0 35 TCGGACG 25 3.8912323E-5 45.0 11 CCTCACG 40 6.8175723E-9 45.0 45 AACGCCA 35 1.2121745E-7 45.0 30 GTCGTTG 20 7.0338E-4 45.0 1 CGTAAAC 50 2.1827873E-11 45.0 35 TATCGTC 20 7.0338E-4 45.0 22 CCGTTCC 35 1.2121745E-7 45.0 16 TCGAACT 20 7.0338E-4 45.0 16 CGGACTA 25 3.8912323E-5 45.0 11 CTTAACG 30 2.1658343E-6 44.999996 1 ACTAACG 30 2.1658343E-6 44.999996 25 TACTCGC 135 0.0 43.333332 45 CGTTAGG 125 0.0 43.2 2 GCGCGAC 75 0.0 42.0 9 >>END_MODULE