SRR1547424_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547424_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2578430
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20098	0.7794665746209903	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTCGC	30	2.1665564E-6	45.000004	18
ACGCGAT	55	1.8189894E-12	45.0	1
CTATCGT	20	7.034921E-4	45.0	26
CGCGCGA	20	7.034921E-4	45.0	13
CGCGAAA	20	7.034921E-4	45.0	12
TACGCAA	35	1.2127202E-7	45.0	18
TACGAGT	25	3.89216E-5	45.0	22
CTACGAT	20	7.034921E-4	45.0	20
GTCCGTT	25	3.89216E-5	45.0	28
ACGCTCG	20	7.034921E-4	45.0	28
AATTACG	35	1.2127202E-7	45.0	1
CCGCGAA	20	7.034921E-4	45.0	11
ATACCGG	75	0.0	45.0	2
TACGTCG	25	3.89216E-5	45.0	1
ATCGACG	25	3.89216E-5	45.0	1
ATATCCG	90	0.0	42.5	1
GACCGAT	1440	0.0	42.34375	9
AGTACGG	250	0.0	42.300003	2
CGTTTTT	9290	0.0	42.287407	1
ATCCGGC	55	6.184564E-11	40.909092	10