##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547423_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2363910 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.301731030369176 31.0 31.0 33.0 30.0 34.0 2 31.724036871116073 31.0 31.0 34.0 30.0 34.0 3 31.80461861915217 31.0 31.0 34.0 30.0 34.0 4 35.58906811173014 37.0 35.0 37.0 33.0 37.0 5 35.4740366596021 37.0 35.0 37.0 33.0 37.0 6 35.51059811921774 37.0 35.0 37.0 33.0 37.0 7 35.94356468731889 37.0 35.0 37.0 35.0 37.0 8 35.934621876467375 37.0 35.0 37.0 35.0 37.0 9 37.6628230347179 39.0 37.0 39.0 35.0 39.0 10 36.92103168056313 39.0 37.0 39.0 32.0 39.0 11 36.63305540397054 39.0 35.0 39.0 32.0 39.0 12 36.34342635717942 38.0 35.0 39.0 32.0 39.0 13 36.196304427833546 39.0 35.0 39.0 32.0 39.0 14 37.32890423070252 39.0 36.0 41.0 32.0 41.0 15 37.48042142044325 39.0 36.0 41.0 32.0 41.0 16 37.54115723525853 39.0 35.0 41.0 32.0 41.0 17 37.450233299914125 39.0 35.0 41.0 32.0 41.0 18 37.326473089077 39.0 36.0 41.0 32.0 41.0 19 37.262199491520406 39.0 36.0 41.0 32.0 41.0 20 37.08436827121168 39.0 35.0 41.0 32.0 41.0 21 36.975996548091935 39.0 35.0 41.0 31.0 41.0 22 36.89764796460102 39.0 35.0 41.0 31.0 41.0 23 36.794009501207746 38.0 35.0 41.0 31.0 41.0 24 36.6556645557572 38.0 35.0 40.0 31.0 41.0 25 36.58393847481503 38.0 35.0 40.0 31.0 41.0 26 36.45697551937256 38.0 35.0 40.0 31.0 41.0 27 36.35626187122183 38.0 35.0 40.0 30.0 41.0 28 36.427723559695586 38.0 35.0 40.0 30.0 41.0 29 36.465575254557066 38.0 35.0 40.0 30.0 41.0 30 36.396418222351954 38.0 35.0 40.0 30.0 41.0 31 36.29674056964944 38.0 35.0 40.0 30.0 41.0 32 36.1670347009827 38.0 35.0 40.0 30.0 41.0 33 35.94767821109941 38.0 35.0 40.0 29.0 41.0 34 35.72363880181564 38.0 35.0 40.0 28.0 41.0 35 35.56536712480594 38.0 35.0 40.0 27.0 41.0 36 35.398297735531386 38.0 34.0 40.0 26.0 41.0 37 35.291737418091216 38.0 34.0 40.0 26.0 41.0 38 35.22940848001827 38.0 34.0 40.0 25.0 41.0 39 35.20145521614613 38.0 34.0 40.0 25.0 41.0 40 35.0582682927861 38.0 34.0 40.0 24.0 41.0 41 34.99931046444239 38.0 34.0 40.0 24.0 41.0 42 34.92941990177291 38.0 34.0 40.0 24.0 41.0 43 34.873719388640005 38.0 34.0 40.0 24.0 41.0 44 34.7318019721563 38.0 34.0 40.0 24.0 41.0 45 34.643718246464545 38.0 34.0 40.0 23.0 41.0 46 34.570147763662746 37.0 33.0 40.0 23.0 41.0 47 34.435291106683415 37.0 33.0 40.0 23.0 41.0 48 34.40154828229501 37.0 33.0 40.0 23.0 41.0 49 34.297402608390335 37.0 33.0 40.0 23.0 41.0 50 34.23016020068446 37.0 33.0 40.0 23.0 41.0 51 33.81575567597751 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 4.0 13 8.0 14 20.0 15 69.0 16 178.0 17 477.0 18 1025.0 19 2027.0 20 3589.0 21 5784.0 22 8769.0 23 12784.0 24 18917.0 25 27415.0 26 37853.0 27 44839.0 28 49005.0 29 53590.0 30 61522.0 31 73481.0 32 89383.0 33 113097.0 34 169476.0 35 238113.0 36 189561.0 37 231025.0 38 341624.0 39 590065.0 40 206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.67371854258411 24.435490352847612 30.035661256139196 15.855129848429087 2 31.30076864178416 26.05327613995457 29.524051254066357 13.121903964194914 3 26.028402096526516 24.803143943720364 35.220968649398664 13.947485310354454 4 23.323561387700884 27.95715572927903 34.38108895854749 14.33819392447259 5 22.2038910110791 32.75221983916477 32.039925377869714 13.00396377188641 6 21.238160505264585 40.50365707662305 28.49258220490628 9.765600213206087 7 88.70126189237322 2.5627456206031534 7.760447732781704 0.9755447542419128 8 89.43496156791079 2.087008388644238 7.290125258575834 1.1879047848691362 9 85.07840823043179 4.847477272823415 8.383398691151523 1.6907158055932756 10 36.08817594578474 37.783883481181604 15.350880532676795 10.777060040356865 11 27.00238164735544 26.057464116654188 31.14116019645418 15.798994039536193 12 29.58589794027691 22.520527431247384 30.09243160695627 17.80114302151943 13 20.969664665744467 29.160501034303337 31.148901607929236 18.720932692022963 14 16.57694243858692 31.169926097017232 31.797911087985582 20.455220376410267 15 16.24634609608657 27.45950564953826 38.80511525396483 17.489033000410338 16 19.088120952151307 25.53269794535325 37.572242598068456 17.806938504426988 17 18.831469895215978 26.606512092253936 30.656327863581943 23.905690148948143 18 19.024878273707543 27.847253068010204 33.72886446607527 19.399004192206977 19 22.72561138114395 28.455355745354094 29.47942180539868 19.339611068103267 20 24.715365644208113 26.886514291999276 31.080244171732424 17.31787589206019 21 21.791777182718462 28.61238372019239 31.791734879923517 17.80410421716563 22 22.084808643307063 25.345634986103533 31.359527223963685 21.21002914662572 23 19.588647621948382 29.33664987245707 30.965011358300444 20.1096911472941 24 18.91840213882931 26.64720738099166 36.61243448354633 17.821955996632695 25 18.336273377582057 29.936841927146123 32.37056402316501 19.356320672106804 26 18.0359658362628 32.91297045995829 29.752993980312283 19.29806972346663 27 17.637642719054448 32.9157624444247 30.614025068636288 18.832569767884564 28 16.473385196559935 30.686785875942824 34.817780710771565 18.02204821672568 29 17.385983391922704 26.522752558261526 34.53388665389122 21.557377395924547 30 17.941799814713757 30.377933170044546 32.83894056880338 18.841326446438316 31 21.942121315955347 29.465292671886832 29.94788295662694 18.64470305553088 32 22.250931719058677 28.78705196052303 30.339776049003557 18.622240271414732 33 20.75218599692882 29.78802069452729 30.318243926376216 19.141549382167682 34 18.43864614135056 29.55315557698897 30.509283348350824 21.498914933309642 35 18.42430549386398 28.846783506986306 31.84516330993989 20.883747689209827 36 21.97795178327432 29.85841254531687 28.696608584929205 19.467027086479604 37 19.13275040081898 31.427550118236315 31.043779162489265 18.395920318455442 38 18.61301826211658 31.184520561273484 30.240237572496415 19.962223604113525 39 18.890313082985394 32.377247864766424 29.18076407308231 19.551674979165874 40 21.288162408890354 29.285717307342495 29.130296838712134 20.295823445055014 41 17.177007584891133 29.009268542372595 31.212778828297182 22.600945044439086 42 19.366938673638167 29.061597099720377 28.99458947252645 22.576874754115003 43 19.725116438443088 29.78916286999082 29.06696955467848 21.418751136887614 44 18.331662372932982 30.930534580419728 29.609714413831323 21.12808863281597 45 17.616195202016996 32.840082744266915 27.998993193480292 21.544728860235796 46 19.33923034294876 31.93048804734529 28.363347166347282 20.366934443358673 47 18.96337000985655 29.919074753268948 29.991370229831084 21.126185007043414 48 19.080168026701525 28.567500454755045 31.851424123591848 20.500907394951582 49 18.71627938457894 29.01108756255526 30.90587205096641 21.366761001899395 50 17.74538793778105 30.99889589705192 30.566265213142636 20.689450952024398 51 16.990494561975712 30.999615044565992 29.855451349670677 22.154439043787626 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1866.0 1 2734.5 2 3603.0 3 23825.5 4 44048.0 5 28950.0 6 13852.0 7 13889.0 8 13926.0 9 15142.5 10 16359.0 11 17249.0 12 18139.0 13 18075.0 14 18011.0 15 17882.5 16 17754.0 17 17604.5 18 17455.0 19 17555.5 20 17656.0 21 17813.5 22 17971.0 23 19306.5 24 20642.0 25 23065.5 26 31915.5 27 38342.0 28 44183.0 29 50024.0 30 56310.5 31 62597.0 32 73235.0 33 83873.0 34 92787.0 35 101701.0 36 103905.0 37 106109.0 38 117323.0 39 128537.0 40 142527.0 41 156517.0 42 168855.5 43 181194.0 44 184861.5 45 188529.0 46 183042.0 47 177555.0 48 173821.0 49 170087.0 50 159675.0 51 149263.0 52 138570.0 53 127877.0 54 114830.0 55 101783.0 56 90548.5 57 79314.0 58 74796.5 59 70279.0 60 62686.5 61 55094.0 62 47056.5 63 39019.0 64 30365.0 65 21711.0 66 17002.5 67 12294.0 68 9540.5 69 6787.0 70 5015.5 71 3244.0 72 2909.5 73 2575.0 74 1905.5 75 947.5 76 659.0 77 604.5 78 550.0 79 376.0 80 202.0 81 155.5 82 109.0 83 80.0 84 51.0 85 31.0 86 11.0 87 11.0 88 11.0 89 6.5 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2363910.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.851525408849405 #Duplication Level Percentage of deduplicated Percentage of total 1 80.10061093571383 17.503205351261116 2 7.440020632564555 3.2515159978969637 3 2.682781451357157 1.7586860115216238 4 1.3921542761410113 1.2168277815253463 5 0.8906625491553704 0.973116766178958 6 0.6306659332975192 0.8268607599567879 7 0.4574077497201022 0.6996539945649408 8 0.3509899604006135 0.6135732830356041 9 0.28319032585897974 0.5569326540943054 >10 3.3612526659754978 17.73760406605159 >50 1.402958866754602 22.38377414895751 >100 1.0045764156831263 30.603832314002986 >500 0.001948740984022549 0.2682726677041 >1k 5.846222952067647E-4 0.2587766669266374 >5k 0.0 0.0 >10k+ 1.948740984022549E-4 1.3473675363214965 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31641 1.3385027348756933 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2649 0.1120601038110588 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.230279494566206E-5 0.0 0.0 0.031050251490115952 0.0 2 4.230279494566206E-5 0.0 0.0 0.10863357742046018 0.0 3 4.230279494566206E-5 0.0 0.0 0.16887275742308294 0.0 4 4.230279494566206E-5 0.0 0.0 0.30043444970409194 0.0 5 4.230279494566206E-5 0.0 0.0 0.5448176961051817 0.0 6 4.230279494566206E-5 0.0 0.0 0.8931812124827088 0.0 7 4.230279494566206E-5 0.0 0.0 1.0661150382205753 0.0 8 4.230279494566206E-5 0.0 0.0 1.4044527921959804 0.0 9 4.230279494566206E-5 0.0 0.0 1.5375796878899788 0.0 10 4.230279494566206E-5 0.0 0.0 1.758611791481063 0.0 11 4.230279494566206E-5 0.0 0.0 2.0510087101454793 0.0 12 4.230279494566206E-5 0.0 0.0 2.274198256278792 0.0 13 4.230279494566206E-5 0.0 0.0 2.3809705107216432 0.0 14 4.230279494566206E-5 0.0 0.0 2.4294918165243176 0.0 15 4.230279494566206E-5 0.0 0.0 2.4878696735493313 0.0 16 4.230279494566206E-5 0.0 0.0 2.6115630459704473 0.0 17 4.230279494566206E-5 0.0 0.0 2.766433578266516 0.0 18 4.230279494566206E-5 0.0 0.0 2.946474273555254 0.0 19 4.230279494566206E-5 0.0 0.0 3.0669526335604993 0.0 20 4.230279494566206E-5 0.0 0.0 3.18328531966107 0.0 21 4.230279494566206E-5 0.0 0.0 3.349112275848065 0.0 22 4.230279494566206E-5 0.0 0.0 3.534779242864576 0.0 23 4.230279494566206E-5 0.0 0.0 3.7311488170023392 0.0 24 4.230279494566206E-5 0.0 0.0 3.8788278741576456 0.0 25 4.230279494566206E-5 0.0 0.0 4.012420100596047 0.0 26 4.230279494566206E-5 0.0 0.0 4.13213701029227 0.0 27 4.230279494566206E-5 0.0 0.0 4.25676104420219 0.0 28 4.230279494566206E-5 0.0 0.0 4.391622354488961 0.0 29 4.230279494566206E-5 0.0 0.0 4.542304910085409 0.0 30 4.230279494566206E-5 0.0 0.0 4.720780401961157 0.0 31 8.460558989132412E-5 4.230279494566206E-5 0.0 4.881996353499075 0.0 32 8.460558989132412E-5 4.230279494566206E-5 0.0 5.035428590766992 0.0 33 8.460558989132412E-5 4.230279494566206E-5 0.0 5.183996006616157 0.0 34 8.460558989132412E-5 4.230279494566206E-5 0.0 5.338020483013313 0.0 35 8.460558989132412E-5 4.230279494566206E-5 0.0 5.522799091335965 0.0 36 8.460558989132412E-5 4.230279494566206E-5 0.0 5.6951406779445914 0.0 37 8.460558989132412E-5 4.230279494566206E-5 0.0 5.869343587530828 0.0 38 8.460558989132412E-5 4.230279494566206E-5 0.0 6.047903684996467 0.0 39 1.2690838483698618E-4 4.230279494566206E-5 0.0 6.232978412883739 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAGT 20 7.0348004E-4 45.000004 1 CTCGCGA 25 3.8920618E-5 45.0 26 CGATCGA 25 3.8920618E-5 45.0 10 TCGCGAC 25 3.8920618E-5 45.0 27 CGTTTTT 13030 0.0 43.08327 1 GACGGGT 180 0.0 41.250004 4 GCGATGT 350 0.0 40.5 9 TACGGGA 945 0.0 40.47619 4 TGCGTAG 145 0.0 40.344826 1 AAGGGCG 720 0.0 40.000004 5 CTCGTCC 920 0.0 39.375004 37 TCGCGAG 40 3.4602817E-7 39.375004 1 CGTATGG 335 0.0 38.955223 2 TAAGGGA 3675 0.0 38.693874 4 ACGGGAT 1355 0.0 38.690037 5 GGGCGAT 3395 0.0 38.57143 7 TCGATAG 135 0.0 38.333332 1 TCGTCCC 935 0.0 38.26203 38 TATGGGA 2880 0.0 38.20313 4 GGTCGGA 65 9.094947E-12 38.07692 8 >>END_MODULE