SRR1547422_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547422_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2638789
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67384	2.55359560768216	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTT	2704	0.10247124722742137	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	32705	44.002445	1
CGACGGT	150	40.5	28
GTTAGCG	115	39.130432	1
GGCCGAT	600	39.0	8
CGTAAGG	445	38.932587	2
AGGGCGA	1965	38.931297	6
GTTTTTT	37510	38.665688	2
TACGCGG	140	38.571426	2
CGGTCTA	140	38.571426	31
GGGCGAT	3980	38.329147	7
AGGGATT	5060	38.018772	6
ATAGGGA	4110	37.992702	4
TAGGGAT	4125	37.96364	5
CGAGGGT	785	37.834396	4
GACCGAT	1380	37.5	9
TAGGGAC	3140	37.332806	5
AAGGGAT	4495	37.291435	5
TATGGGT	1020	37.27941	4
GCGTAAG	145	37.241383	1
TTAGGGA	3925	37.089176	4