##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547422_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2638789 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29023654411171 31.0 31.0 33.0 30.0 34.0 2 31.68688629519071 31.0 31.0 34.0 30.0 34.0 3 31.609656171827304 31.0 31.0 34.0 30.0 34.0 4 35.492167050870684 37.0 35.0 37.0 33.0 37.0 5 35.438070266322924 37.0 35.0 37.0 33.0 37.0 6 35.497552854737535 37.0 35.0 37.0 33.0 37.0 7 35.95029992924785 37.0 35.0 37.0 35.0 37.0 8 35.94813075240195 37.0 35.0 37.0 35.0 37.0 9 37.664879609548166 39.0 37.0 39.0 35.0 39.0 10 36.90948651066834 39.0 37.0 39.0 32.0 39.0 11 36.65670313162591 39.0 35.0 39.0 32.0 39.0 12 36.50422978116098 39.0 35.0 39.0 32.0 39.0 13 36.43899190120923 39.0 35.0 39.0 32.0 39.0 14 37.60165287940794 40.0 36.0 41.0 32.0 41.0 15 37.698973279030646 40.0 36.0 41.0 32.0 41.0 16 37.728680845645485 40.0 36.0 41.0 32.0 41.0 17 37.63661323432832 40.0 36.0 41.0 32.0 41.0 18 37.4008122665359 39.0 36.0 41.0 32.0 41.0 19 37.21344146879497 38.0 36.0 41.0 32.0 41.0 20 36.93426075370179 38.0 35.0 41.0 32.0 41.0 21 36.82389194437297 38.0 35.0 40.0 31.0 41.0 22 36.75044840644705 38.0 35.0 40.0 31.0 41.0 23 36.641730354340574 38.0 35.0 40.0 31.0 41.0 24 36.49609195733346 38.0 35.0 40.0 31.0 41.0 25 36.402833648313674 38.0 35.0 40.0 31.0 41.0 26 36.245368993125254 38.0 35.0 40.0 30.0 41.0 27 36.1494624996542 38.0 35.0 40.0 30.0 41.0 28 36.13525295125908 38.0 35.0 40.0 30.0 41.0 29 36.09951458794166 38.0 35.0 40.0 30.0 41.0 30 35.9851640278931 38.0 35.0 40.0 30.0 41.0 31 35.79780194627157 38.0 35.0 40.0 29.0 41.0 32 35.528012660352914 38.0 34.0 40.0 27.0 41.0 33 35.07456602252018 38.0 34.0 40.0 24.0 41.0 34 34.59386028970107 38.0 34.0 40.0 22.0 41.0 35 34.23607078853217 38.0 33.0 40.0 20.0 41.0 36 33.995482018456194 38.0 33.0 40.0 18.0 41.0 37 33.862970097268104 38.0 33.0 40.0 18.0 41.0 38 33.764114523745555 38.0 33.0 40.0 18.0 41.0 39 33.70808806615459 37.0 33.0 40.0 17.0 41.0 40 33.57567656982047 37.0 33.0 40.0 16.0 41.0 41 33.47070720698017 37.0 33.0 40.0 15.0 41.0 42 33.37818711537755 37.0 33.0 40.0 15.0 41.0 43 33.32503773511258 37.0 33.0 40.0 15.0 41.0 44 33.19885030595474 37.0 32.0 40.0 15.0 41.0 45 33.11278469024996 37.0 32.0 40.0 15.0 41.0 46 33.036001741708034 37.0 32.0 40.0 15.0 41.0 47 32.90252308918978 36.0 32.0 40.0 14.0 41.0 48 32.85091949375263 36.0 32.0 40.0 14.0 41.0 49 32.73525317863611 36.0 31.0 40.0 13.0 41.0 50 32.649879925981196 36.0 31.0 40.0 13.0 41.0 51 32.26265912128632 35.0 31.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 4.0 13 9.0 14 24.0 15 86.0 16 316.0 17 783.0 18 1766.0 19 3371.0 20 5917.0 21 9340.0 22 14113.0 23 20718.0 24 31401.0 25 48438.0 26 69608.0 27 76934.0 28 74226.0 29 71329.0 30 74985.0 31 83631.0 32 98809.0 33 121600.0 34 172211.0 35 233742.0 36 224124.0 37 256799.0 38 363927.0 39 580428.0 40 148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.50311677060955 23.006310849408575 25.083021037301577 22.4075513426803 2 37.52850265784797 23.970313655241096 26.635096629552418 11.866087057358508 3 25.352652296185862 23.73524370459328 38.86354687699547 12.048557122225384 4 21.57580617472636 26.513866777525603 38.94195405543982 12.968372992308213 5 20.49125564795063 30.16758823839269 36.98689057745807 12.354265536198612 6 19.129494628028233 38.25266059544738 33.523711065947296 9.094133710577086 7 82.32477094606655 2.308710548664558 14.398309224420746 0.9682092808481466 8 82.92648635415716 1.9159167330165465 14.130989631986491 1.0266072808398095 9 78.39599907381756 4.619808556121766 15.384746563669927 1.5994458063907344 10 31.887733350411875 33.83840087252145 25.058085356578342 9.215780420488336 11 23.504456021303714 25.541185748462645 35.123952691935585 15.83040553829806 12 23.670289666964656 23.22792765924066 35.98988020641286 17.111902467381817 13 20.331030635643852 26.306082070222363 36.93561705767305 16.42727023646074 14 17.164843418704564 28.909928001064124 36.534145018794604 17.391083561436705 15 16.792665120250234 27.62373194673769 39.988267345361834 15.595335587650244 16 19.544419807722406 26.159272302559998 38.524641416953 15.77166647276459 17 19.28464155337922 26.429699381041832 35.48476213899633 18.80089692658261 18 19.536537404089525 26.892411632760332 36.86255323938367 16.70849772376647 19 20.978827788049745 28.26667838921566 34.089917761518635 16.66457606121596 20 22.20583002278697 28.04517526789751 34.18613614047959 15.562858568835933 21 21.024037920424863 27.180308846216956 36.302106761851746 15.493546471506436 22 21.01255538051735 25.009426672613838 35.26378956407655 18.714228382792257 23 17.85436425572488 28.662124936855506 35.59553264774107 17.88797815967855 24 17.66692979241614 27.747614530756344 38.26774327162952 16.31771240519799 25 18.23487971186783 29.19699149875189 35.77080244005868 16.7973263493216 26 18.141389857241332 30.74035097160099 33.978730394889475 17.139528776268204 27 17.21638221168877 30.486749793181644 35.335034366142956 16.961833628986632 28 16.820594598507117 29.691612326715024 37.13779313162212 16.349999943155744 29 17.19497087489754 27.908900635859858 36.902078946062 17.994049543180605 30 17.930990314117572 28.583604069897213 35.982566245349666 17.502839370635545 31 19.57272824769241 28.904812017937015 33.97456181604516 17.547897918325415 32 20.06382473172353 28.78706861367089 33.73445167461286 17.414654979992715 33 19.450058341155735 29.38173533389748 32.726792479429015 18.441413845517772 34 18.115961526291038 30.03669486268133 33.245022622119464 18.60232098890817 35 18.80995411152616 30.43464255762776 32.54432241456213 18.211080916283947 36 20.64769104312622 31.24592379307326 30.346533959327555 17.75985120447296 37 18.692627565144466 32.40293179939738 31.143149376475343 17.761291258982816 38 18.876461892178572 32.26048009143588 30.626321392123433 18.236736624262115 39 18.5855708811883 32.42259991230826 30.271385851616024 18.72044335488741 40 20.234622775826335 30.960982480978966 30.298026860048306 18.5063678831464 41 18.111982428303286 30.769152061798046 31.081227032551674 20.037638477346995 42 19.03585318871649 31.3366851233653 29.883594330581186 19.743867357337024 43 19.1010724995443 31.427560142171274 29.84410652007417 19.627260838210255 44 18.67887125495824 32.073576174525506 30.07140775560304 19.176144814913204 45 18.569616593065984 32.78253774742884 28.83800106791411 19.809844591591066 46 19.473932929082242 32.59233686361433 29.087395771317826 18.846334435985597 47 18.92565112254144 31.496910135672085 30.42532009948503 19.15211864230145 48 19.078865343155517 30.596156039759148 31.078650092902464 19.246328524182875 49 19.01133436587768 30.504106239642503 30.89898434471267 19.585575049767147 50 18.204411190133047 31.939916378308382 30.690896468038936 19.164775963519627 51 17.924131107110117 31.963677277720954 29.933768861398164 20.178422753770764 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1987.0 1 2644.0 2 3301.0 3 49303.0 4 95305.0 5 63700.5 6 32096.0 7 32896.0 8 33696.0 9 36401.0 10 39106.0 11 41702.5 12 44299.0 13 44623.0 14 44947.0 15 42449.5 16 39952.0 17 37704.0 18 35456.0 19 33128.0 20 30800.0 21 29901.0 22 29002.0 23 29256.0 24 29510.0 25 31436.5 26 36054.5 27 38746.0 28 45753.0 29 52760.0 30 57752.5 31 62745.0 32 70556.0 33 78367.0 34 87130.0 35 95893.0 36 102192.5 37 108492.0 38 115876.5 39 123261.0 40 136744.5 41 150228.0 42 158818.0 43 167408.0 44 171366.0 45 175324.0 46 180111.0 47 184898.0 48 181099.5 49 177301.0 50 169658.0 51 162015.0 52 150025.0 53 138035.0 54 124735.0 55 111435.0 56 102576.0 57 93717.0 58 83248.0 59 72779.0 60 64076.5 61 55374.0 62 46387.5 63 37401.0 64 31349.0 65 25297.0 66 19691.0 67 14085.0 68 10844.5 69 7604.0 70 6209.5 71 4815.0 72 3895.5 73 2976.0 74 2705.0 75 1803.0 76 1172.0 77 972.0 78 772.0 79 530.5 80 289.0 81 220.5 82 152.0 83 118.5 84 85.0 85 74.0 86 63.0 87 45.5 88 28.0 89 19.0 90 10.0 91 8.0 92 6.0 93 4.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2638789.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.593153949535413 #Duplication Level Percentage of deduplicated Percentage of total 1 77.79027111735562 20.68688655599936 2 6.947270863014389 3.694996871785268 3 3.0396725224098766 2.425034380338555 4 1.8888983367707672 2.009270570590656 5 1.3264630791162029 1.7637418435655983 6 1.0096586318963063 1.6110004460697473 7 0.7337997206902668 1.3659834258309647 8 0.5648431350529147 1.2016768358240308 9 0.45371273380340793 1.0859087321008747 >10 4.787559790754808 28.782510142095987 >50 1.146231233836272 21.42484735650117 >100 0.30858268072142564 10.596663893179793 >500 0.002024103051711613 0.36675604477532836 >1k 8.67472736447834E-4 0.3939388232275935 >5k 0.0 0.0 >10k+ 1.4457878940797234E-4 2.5907840781151825 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 67384 2.55359560768216 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTT 2704 0.10247124722742137 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1368851393574856E-4 0.0 0.0 0.02565570797816726 0.0 2 1.1368851393574856E-4 0.0 0.0 0.06290764437778087 0.0 3 1.1368851393574856E-4 0.0 0.0 0.11459802204723454 0.0 4 1.1368851393574856E-4 0.0 0.0 0.1870555015956183 0.0 5 1.1368851393574856E-4 0.0 0.0 0.3736562491354936 0.0 6 1.1368851393574856E-4 0.0 0.0 0.7375352860725128 0.0 7 1.1368851393574856E-4 0.0 0.0 0.9779485968753091 0.0 8 1.1368851393574856E-4 0.0 0.0 1.318483592284188 0.0 9 1.5158468524766475E-4 0.0 0.0 1.4878794780484532 0.0 10 1.5158468524766475E-4 0.0 0.0 1.683385825846629 0.0 11 1.5158468524766475E-4 0.0 0.0 1.8802564358120335 0.0 12 1.5158468524766475E-4 0.0 0.0 2.039306666808146 0.0 13 1.5158468524766475E-4 0.0 0.0 2.1415505370076957 0.0 14 1.5158468524766475E-4 0.0 0.0 2.1979779360911387 0.0 15 1.5158468524766475E-4 0.0 0.0 2.248683013306483 0.0 16 1.5158468524766475E-4 0.0 0.0 2.3295155467148 0.0 17 1.5158468524766475E-4 0.0 0.0 2.423005401341297 0.0 18 1.5158468524766475E-4 0.0 0.0 2.5281293805605527 0.0 19 1.5158468524766475E-4 0.0 0.0 2.6063091819770356 0.0 20 1.5158468524766475E-4 0.0 0.0 2.6883922890386462 0.0 21 1.5158468524766475E-4 0.0 0.0 2.7900298204972054 0.0 22 1.5158468524766475E-4 0.0 0.0 2.912396557663383 0.0 23 1.5158468524766475E-4 0.0 0.0 3.050528102095317 0.0 24 1.5158468524766475E-4 0.0 0.0 3.163269211748268 0.0 25 1.8948085655958092E-4 0.0 0.0 3.264868847035515 0.0 26 1.8948085655958092E-4 3.789617131191619E-5 0.0 3.362565176677635 0.0 27 1.8948085655958092E-4 3.789617131191619E-5 0.0 3.466552270757533 0.0 28 1.8948085655958092E-4 3.789617131191619E-5 0.0 3.5748595283669897 0.0 29 1.8948085655958092E-4 3.789617131191619E-5 0.0 3.6953314569675713 0.0 30 1.8948085655958092E-4 3.789617131191619E-5 0.0 3.8408527548053293 0.0 31 1.8948085655958092E-4 3.789617131191619E-5 0.0 3.972655638628174 0.0 32 1.8948085655958092E-4 3.789617131191619E-5 0.0 4.108513412781393 0.0 33 1.8948085655958092E-4 3.789617131191619E-5 0.0 4.2390657229509445 0.0 34 1.8948085655958092E-4 3.789617131191619E-5 0.0 4.369390656092624 0.0 35 1.8948085655958092E-4 3.789617131191619E-5 0.0 4.5223774996788295 0.0 36 1.8948085655958092E-4 3.789617131191619E-5 0.0 4.660509044110764 0.0 37 1.8948085655958092E-4 3.789617131191619E-5 0.0 4.808076735199366 0.0 38 1.8948085655958092E-4 3.789617131191619E-5 0.0 4.965270053801194 0.0 39 1.8948085655958092E-4 3.789617131191619E-5 0.0 5.167370335407643 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 32705 0.0 44.002445 1 CGACGGT 150 0.0 40.5 28 GTTAGCG 115 0.0 39.130432 1 GGCCGAT 600 0.0 39.0 8 CGTAAGG 445 0.0 38.932587 2 AGGGCGA 1965 0.0 38.931297 6 GTTTTTT 37510 0.0 38.665688 2 TACGCGG 140 0.0 38.571426 2 CGGTCTA 140 0.0 38.571426 31 GGGCGAT 3980 0.0 38.329147 7 AGGGATT 5060 0.0 38.018772 6 ATAGGGA 4110 0.0 37.992702 4 TAGGGAT 4125 0.0 37.96364 5 CGAGGGT 785 0.0 37.834396 4 GACCGAT 1380 0.0 37.5 9 TAGGGAC 3140 0.0 37.332806 5 AAGGGAT 4495 0.0 37.291435 5 TATGGGT 1020 0.0 37.27941 4 GCGTAAG 145 0.0 37.241383 1 TTAGGGA 3925 0.0 37.089176 4 >>END_MODULE