SRR1547421_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547421_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1046017
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12273	1.1733078907895378	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1999	0.19110588068836357	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1100	0.10516081478599297	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTGCGA	45	3.8562575E-10	45.000004	12
AACGGGA	310	0.0	45.000004	4
ATCGGCC	45	3.8562575E-10	45.000004	35
TATCGTG	45	3.8562575E-10	45.000004	1
GTCGGAC	45	3.8562575E-10	45.000004	10
ACGCGAC	20	7.0329965E-4	45.0	36
TCACGCG	25	3.890564E-5	45.0	34
CGTGGTA	35	1.2117926E-7	45.0	22
TATCACG	25	3.890564E-5	45.0	1
AACCGGA	20	7.0329965E-4	45.0	10
CTGTCGT	20	7.0329965E-4	45.0	44
AATCCGA	20	7.0329965E-4	45.0	26
TCGTTCA	25	3.890564E-5	45.0	16
GCCCATA	25	3.890564E-5	45.0	13
CTCGTTA	20	7.0329965E-4	45.0	45
GTCGATC	20	7.0329965E-4	45.0	45
CAAGTAG	140	0.0	45.0	1
GGTCGAC	35	1.2117926E-7	45.0	8
ACGTTAC	20	7.0329965E-4	45.0	12
CGTGCCA	20	7.0329965E-4	45.0	37