##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547420_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1411027 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44550742119038 31.0 31.0 33.0 30.0 34.0 2 31.863432804616778 31.0 31.0 34.0 30.0 34.0 3 31.92623954041985 31.0 31.0 34.0 30.0 34.0 4 35.70032040492492 37.0 35.0 37.0 33.0 37.0 5 35.613048510056856 37.0 35.0 37.0 33.0 37.0 6 35.64624064599756 37.0 35.0 37.0 33.0 37.0 7 35.99673216742132 37.0 35.0 37.0 35.0 37.0 8 35.9821668897902 37.0 35.0 37.0 35.0 37.0 9 37.715679430655825 39.0 38.0 39.0 35.0 39.0 10 37.131353971256395 39.0 37.0 39.0 33.0 39.0 11 36.792052171928674 39.0 37.0 39.0 32.0 39.0 12 36.12460640370453 38.0 35.0 39.0 32.0 39.0 13 35.726672841837896 38.0 35.0 39.0 31.0 39.0 14 36.81953003025456 39.0 35.0 41.0 31.0 41.0 15 37.089332805112875 39.0 35.0 41.0 32.0 41.0 16 37.255931318110854 39.0 35.0 41.0 32.0 41.0 17 37.170036434455184 39.0 35.0 41.0 32.0 41.0 18 37.02557924121934 38.0 35.0 40.0 32.0 41.0 19 36.91832544664276 38.0 35.0 40.0 32.0 41.0 20 36.68624342411591 38.0 35.0 40.0 32.0 41.0 21 36.558249416914066 38.0 35.0 40.0 31.0 41.0 22 36.46677420063542 38.0 35.0 40.0 31.0 41.0 23 36.40596317434039 38.0 35.0 40.0 31.0 41.0 24 36.26599278397933 38.0 35.0 40.0 31.0 41.0 25 36.188786607201706 37.0 35.0 40.0 31.0 41.0 26 36.05924479120527 37.0 35.0 40.0 31.0 41.0 27 35.96420266940321 37.0 35.0 40.0 30.0 41.0 28 36.063243297257955 37.0 35.0 40.0 30.0 41.0 29 36.11230826908344 37.0 35.0 40.0 31.0 41.0 30 36.06729495608518 37.0 35.0 40.0 30.0 41.0 31 35.90246607612753 37.0 35.0 40.0 30.0 41.0 32 35.702319657951264 37.0 34.0 40.0 30.0 41.0 33 35.43483930498849 37.0 34.0 40.0 29.0 41.0 34 35.15465543891081 37.0 34.0 40.0 27.0 41.0 35 34.952776948988216 37.0 34.0 40.0 25.0 41.0 36 34.73588953294303 37.0 34.0 40.0 24.0 41.0 37 34.62395049846672 37.0 34.0 40.0 24.0 41.0 38 34.572608461779964 37.0 34.0 40.0 23.0 41.0 39 34.556611602754586 37.0 34.0 40.0 23.0 41.0 40 34.365785346417894 37.0 33.0 40.0 23.0 41.0 41 34.301728457357655 36.0 34.0 40.0 23.0 41.0 42 34.23256535842333 36.0 33.0 40.0 23.0 41.0 43 34.164919594026195 36.0 33.0 40.0 23.0 41.0 44 34.0047773713756 36.0 33.0 40.0 23.0 41.0 45 33.91651187397548 36.0 33.0 40.0 23.0 41.0 46 33.83609810443032 36.0 33.0 40.0 22.0 41.0 47 33.74138765594138 35.0 33.0 40.0 22.0 41.0 48 33.729226301126765 35.0 33.0 40.0 22.0 41.0 49 33.63312395864856 36.0 33.0 40.0 22.0 41.0 50 33.56144354431205 35.0 33.0 40.0 21.0 41.0 51 33.124386705569776 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 2.0 13 7.0 14 29.0 15 59.0 16 145.0 17 320.0 18 749.0 19 1397.0 20 2481.0 21 3892.0 22 5893.0 23 8874.0 24 12670.0 25 19012.0 26 26326.0 27 31194.0 28 32760.0 29 34174.0 30 38885.0 31 45759.0 32 55702.0 33 72181.0 34 123620.0 35 180826.0 36 99639.0 37 122255.0 38 180269.0 39 311758.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.258901495152113 24.088341328691797 29.09788402348077 17.55487315267532 2 31.594930500975533 27.044627778206937 28.36416312373895 12.99627859707858 3 27.869913190888624 25.1579877635226 34.0247918714525 12.947307174136286 4 24.353467368094304 27.003452095530417 33.53082542006638 15.112255116308901 5 22.526712812724348 32.23007072153828 31.786847452245777 13.456369013491592 6 22.178597574674335 40.064931429377324 27.989754979883447 9.766716016064894 7 86.50727448872347 3.718213754945866 8.802453815554202 0.9720579407764699 8 87.28975420030942 2.632196265556931 8.659579157592306 1.4184703765413418 9 82.55086543347505 5.71938028117109 9.814766124248509 1.914988161105351 10 43.93083902717666 33.16378779428034 14.583278704092834 8.32209447445017 11 38.73448204747322 20.502584287898102 27.008342150788046 13.754591513840628 12 39.42327113513774 18.961295566987733 27.368221869602777 14.247211428271747 13 22.145288502629647 33.31941911813169 27.13300312467444 17.40228925456423 14 15.708700117006973 35.937299569746 29.585259530824004 18.768740782423016 15 14.957049014653863 26.508209977555353 43.527657514703826 15.00708349308695 16 19.06412846812995 21.605256313309383 42.5637496660234 16.766865552537265 17 18.02913764229884 22.52607497942988 30.9436318369528 28.501155541318486 18 20.345322945627547 25.41808200693537 35.033773272942334 19.202821774494748 19 25.761023708263554 25.568681534796994 28.97251434593385 19.6977804110056 20 27.681964980117318 24.00818694468639 30.22110845504728 18.08873962014901 21 23.32301224569055 27.10472584861948 31.116839011585178 18.45542289410479 22 24.04943349772896 23.97261002092802 29.525941034438034 22.452015446904987 23 20.568989820889325 28.40080310298811 29.221836293706644 21.808370782415928 24 20.465235604988425 24.18068541565824 38.1043736229002 17.249705356453138 25 18.264498127959282 25.774063855617218 35.526605798471614 20.43483221795189 26 18.317863513596837 31.79988759959944 30.09545529603615 19.786793590767576 27 18.22743292651381 33.1418888511701 31.07204894023998 17.558629282076105 28 15.647113768907328 29.516373535020946 37.35173033542235 17.48478236064937 29 16.762613330574112 24.74679789968583 37.29595535733902 21.194633412401036 30 18.304539884778958 29.68837591343043 33.162937349887706 18.844146851902906 31 24.889459946549568 27.347385981983336 28.628722200213037 19.13443187125406 32 25.476904410758973 26.504241237056412 30.34392679941631 17.674927552768303 33 24.339718517080115 28.85125514961797 28.219091484429427 18.58993484887249 34 19.60557806477126 28.305836812477718 30.026144078036776 22.06244104471424 35 19.828252754908306 26.988073226097022 31.846165948631743 21.337508070362933 36 26.131250500521958 26.84874208643775 28.390101677714174 18.629905735326112 37 20.269775135415554 31.22895593068028 30.868650989669227 17.632617944234944 38 20.17140706733464 29.774058185987933 28.393432584918642 21.661102161758773 39 20.14157064322653 29.569880661390602 30.012962189951008 20.275586505431857 40 23.282403525942453 26.589781768881814 28.465295136095907 21.662519569079826 41 16.74347833173993 26.226642013228663 31.59634790829658 25.43353174673483 42 20.573809005780895 26.573127232859473 27.832281026514732 25.020782734844904 43 21.396543085284687 27.22109498967773 28.049427828099677 23.332934096937905 44 19.523014088320068 29.806020721077626 28.9752782902099 21.69568690039241 45 19.51124960755535 33.237705586073126 25.277546071053216 21.973498735318316 46 21.09378488150829 31.851197744621473 27.35737870359674 19.697638670273495 47 20.63057616898897 28.012575237752362 29.411768874727418 21.945079718531254 48 22.18660592603827 25.002356439671246 32.26260021955639 20.548437414734092 49 20.351488667474115 26.015802674222392 31.865584428930134 21.76712422937336 50 19.729034242434764 29.159612112312523 30.242582175961196 20.868771469291516 51 17.898665298396132 30.214234029540187 27.840572859342878 24.046527812720804 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1686.0 1 2482.5 2 3279.0 3 14891.5 4 26504.0 5 18368.0 6 10232.0 7 10151.0 8 10070.0 9 10538.0 10 11006.0 11 11057.0 12 11108.0 13 11009.5 14 10911.0 15 10350.0 16 9789.0 17 9096.5 18 8404.0 19 8482.5 20 8561.0 21 8699.0 22 8837.0 23 8995.5 24 9154.0 25 10088.0 26 13068.0 27 15114.0 28 19197.5 29 23281.0 30 26255.0 31 29229.0 32 34884.0 33 40539.0 34 43571.5 35 46604.0 36 47354.5 37 48105.0 38 51214.5 39 54324.0 40 71741.0 41 89158.0 42 101735.0 43 114312.0 44 117597.0 45 120882.0 46 114584.0 47 108286.0 48 102836.5 49 97387.0 50 91279.0 51 85171.0 52 80497.0 53 75823.0 54 68967.5 55 62112.0 56 62313.5 57 62515.0 58 59808.5 59 57102.0 60 53033.0 61 48964.0 62 41069.0 63 33174.0 64 27501.5 65 21829.0 66 17711.0 67 13593.0 68 10689.0 69 7785.0 70 6755.0 71 5725.0 72 5008.0 73 4291.0 74 3327.5 75 1723.0 76 1082.0 77 974.0 78 866.0 79 688.0 80 510.0 81 347.0 82 184.0 83 132.5 84 81.0 85 56.5 86 32.0 87 22.0 88 12.0 89 8.5 90 5.0 91 7.0 92 9.0 93 10.0 94 11.0 95 7.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1411027.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.770803755705774 #Duplication Level Percentage of deduplicated Percentage of total 1 83.56423732062991 15.685678997407686 2 6.867928694355934 2.578330834598716 3 1.9506422522978215 1.0984536874641095 4 0.9221584938463602 0.6923862447858895 5 0.5346524399113077 0.5017928013542214 6 0.3602242416756062 0.40570191291244395 7 0.26874158436012396 0.3531146878714934 8 0.2053128438884128 0.30831096809242026 9 0.17237155199081874 0.2911997317937484 >10 2.287165070567711 11.0434078711754 >50 1.2728066803998668 17.49043472886909 >100 1.588826937302239 47.482836863298985 >500 0.0030350084762220423 0.36802328333627654 >1k 0.0015175042381110212 0.47932753872609857 >5k 0.0 0.0 >10k+ 3.793760595277553E-4 1.2209998483134283 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17146 1.21514329633664 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2455 0.1739867486589555 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1595 0.11303823385378167 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1415 0.1002815679643267 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.08703660525277E-5 0.0 0.0 0.021757202378126003 0.0 2 7.08703660525277E-5 0.0 0.0 0.08837534646750204 0.0 3 7.08703660525277E-5 0.0 0.0 0.12324356656534567 0.0 4 7.08703660525277E-5 0.0 0.0 0.23160435625966053 0.0 5 7.08703660525277E-5 0.0 0.0 0.36994331079419457 0.0 6 7.08703660525277E-5 0.0 0.0 0.5427961335963096 0.0 7 7.08703660525277E-5 0.0 0.0 0.6258562026098721 0.0 8 7.08703660525277E-5 0.0 0.0 0.8339315973400934 0.0 9 7.08703660525277E-5 0.0 0.0 0.903171944973413 0.0 10 7.08703660525277E-5 0.0 0.0 1.0567480282092405 0.0 11 7.08703660525277E-5 0.0 0.0 1.3176927160146474 0.0 12 7.08703660525277E-5 0.0 0.0 1.4962860384670174 0.0 13 7.08703660525277E-5 0.0 0.0 1.568219460010333 0.0 14 7.08703660525277E-5 0.0 0.0 1.5951501991102934 0.0 15 7.08703660525277E-5 0.0 0.0 1.6441924924186426 0.0 16 7.08703660525277E-5 0.0 0.0 1.7465293009984926 0.0 17 7.08703660525277E-5 0.0 0.0 1.8641741086456887 0.0 18 7.08703660525277E-5 0.0 0.0 2.0071905073396894 0.0 19 7.08703660525277E-5 0.0 0.0 2.082313095355369 0.0 20 7.08703660525277E-5 0.0 0.0 2.165373164368931 0.0 21 7.08703660525277E-5 0.0 0.0 2.2784822685887653 0.0 22 7.08703660525277E-5 0.0 0.0 2.3871265397472903 0.0 23 7.08703660525277E-5 0.0 0.0 2.504416995564224 0.0 24 7.08703660525277E-5 0.0 0.0 2.595131064111459 0.0 25 7.08703660525277E-5 0.0 0.0 2.674364133358185 0.0 26 7.08703660525277E-5 0.0 0.0 2.7511167397930727 0.0 27 7.08703660525277E-5 0.0 0.0 2.8248219204877016 0.0 28 7.08703660525277E-5 0.0 0.0 2.900865823262064 0.0 29 2.1261109815758308E-4 0.0 0.0 2.985059818132467 0.0 30 2.1261109815758308E-4 0.0 0.0 3.0863335712215285 0.0 31 2.1261109815758308E-4 0.0 0.0 3.1939856572553182 0.0 32 2.1261109815758308E-4 0.0 0.0 3.2871093182483397 0.0 33 2.1261109815758308E-4 0.0 0.0 3.379666016312941 0.0 34 2.1261109815758308E-4 0.0 0.0 3.4794514917149 0.0 35 2.1261109815758308E-4 0.0 0.0 3.6110577614744437 0.0 36 2.1261109815758308E-4 0.0 0.0 3.716229384696395 7.08703660525277E-5 37 2.1261109815758308E-4 0.0 0.0 3.8313937295317526 7.08703660525277E-5 38 2.1261109815758308E-4 0.0 0.0 3.9374866675123865 7.08703660525277E-5 39 2.1261109815758308E-4 0.0 0.0 4.0595963082208915 7.08703660525277E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACCGT 30 2.1658543E-6 45.000004 38 ACTCTCG 30 2.1658543E-6 45.000004 41 GTCAACC 30 2.1658543E-6 45.000004 33 CGTACTC 30 2.1658543E-6 45.000004 30 TATAACG 60 0.0 45.000004 1 TGTCGCG 30 2.1658543E-6 45.000004 24 GTCGGAT 30 2.1658543E-6 45.000004 21 TATCCGA 30 2.1658543E-6 45.000004 13 TGATCGC 20 7.0338335E-4 45.0 19 CGAACGC 20 7.0338335E-4 45.0 24 GATCGAC 20 7.0338335E-4 45.0 8 CGTTGCG 20 7.0338335E-4 45.0 31 GCACGAG 40 6.8175723E-9 45.0 1 CGCGATG 40 6.8175723E-9 45.0 22 ACCTCGC 20 7.0338335E-4 45.0 33 CGTTATG 20 7.0338335E-4 45.0 29 TTATACG 40 6.8175723E-9 45.0 1 ATCCGCC 35 1.2121927E-7 45.0 19 CGTAGGT 40 6.8175723E-9 45.0 3 GTGTCGA 20 7.0338335E-4 45.0 23 >>END_MODULE