##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547418_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1546513 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.398341947335716 31.0 31.0 33.0 30.0 34.0 2 31.78621000922721 31.0 31.0 34.0 30.0 34.0 3 31.67956428429635 31.0 31.0 34.0 30.0 34.0 4 35.56693283535282 37.0 35.0 37.0 33.0 37.0 5 35.52302179160473 37.0 35.0 37.0 33.0 37.0 6 35.59032998752678 37.0 35.0 37.0 33.0 37.0 7 36.015616422235055 37.0 35.0 37.0 35.0 37.0 8 36.026845555129505 37.0 35.0 37.0 35.0 37.0 9 37.77654439374257 39.0 38.0 39.0 35.0 39.0 10 37.07460978342891 39.0 37.0 39.0 33.0 39.0 11 36.79010328396851 39.0 37.0 39.0 32.0 39.0 12 36.61497381528639 39.0 35.0 39.0 32.0 39.0 13 36.52647278102415 39.0 35.0 39.0 32.0 39.0 14 37.710820406941295 40.0 36.0 41.0 32.0 41.0 15 37.815085291879214 40.0 36.0 41.0 33.0 41.0 16 37.86147093493556 40.0 36.0 41.0 33.0 41.0 17 37.7944588891267 40.0 36.0 41.0 33.0 41.0 18 37.55404707234921 39.0 36.0 41.0 33.0 41.0 19 37.35175132701762 38.0 36.0 41.0 33.0 41.0 20 37.039675709159894 38.0 35.0 41.0 32.0 41.0 21 36.93239759381266 38.0 35.0 41.0 32.0 41.0 22 36.85140053785516 38.0 35.0 41.0 32.0 41.0 23 36.760993279720246 38.0 35.0 40.0 32.0 41.0 24 36.59301409040855 38.0 35.0 40.0 31.0 41.0 25 36.49100201550197 38.0 35.0 40.0 31.0 41.0 26 36.32053335471477 38.0 35.0 40.0 31.0 41.0 27 36.20975381390263 38.0 35.0 40.0 31.0 41.0 28 36.16050172226163 38.0 35.0 40.0 31.0 41.0 29 36.110743330317945 38.0 35.0 40.0 30.0 41.0 30 35.97956887526972 38.0 35.0 40.0 30.0 41.0 31 35.77355573474002 38.0 35.0 40.0 30.0 41.0 32 35.48576701262776 38.0 34.0 40.0 28.0 41.0 33 35.02143919902387 37.0 34.0 40.0 25.0 41.0 34 34.52573175912521 37.0 34.0 40.0 22.0 41.0 35 34.14571038200131 37.0 33.0 40.0 20.0 41.0 36 33.89037596192208 37.0 33.0 40.0 18.0 41.0 37 33.75485172125938 37.0 33.0 40.0 18.0 41.0 38 33.64477440538812 37.0 33.0 40.0 18.0 41.0 39 33.58317582846054 37.0 33.0 40.0 17.0 41.0 40 33.4407735337498 37.0 33.0 40.0 16.0 41.0 41 33.3435289583728 36.0 33.0 40.0 15.0 41.0 42 33.25488308213381 36.0 33.0 40.0 15.0 41.0 43 33.18921599753769 36.0 33.0 40.0 15.0 41.0 44 33.0585885795981 36.0 33.0 40.0 15.0 41.0 45 32.98646050825308 36.0 32.0 40.0 15.0 41.0 46 32.90011981793881 36.0 32.0 40.0 15.0 41.0 47 32.777351370470214 35.0 32.0 40.0 14.0 41.0 48 32.70897431835361 35.0 32.0 40.0 13.0 41.0 49 32.59582040370821 35.0 31.0 40.0 12.0 41.0 50 32.52884780147338 35.0 31.0 40.0 12.0 41.0 51 32.15532556144048 35.0 31.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 2.0 11 1.0 12 3.0 13 8.0 14 15.0 15 43.0 16 153.0 17 357.0 18 844.0 19 1745.0 20 2956.0 21 4823.0 22 7521.0 23 11702.0 24 17812.0 25 28838.0 26 41695.0 27 44969.0 28 41233.0 29 39470.0 30 41627.0 31 47463.0 32 56782.0 33 71041.0 34 104023.0 35 151656.0 36 149331.0 37 151347.0 38 202824.0 39 326132.0 40 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.465651436489704 22.847657924634323 26.416396111768865 22.27029452710711 2 38.117817309004195 23.59960763343082 26.62848614916267 11.654088908402322 3 24.881200481340926 23.068477277591587 40.26975524939008 11.780566991677405 4 21.65497477227802 25.81678912495401 39.49278150264498 13.035454600122986 5 20.269535399961075 29.48316632320582 38.33811936918733 11.909178907645781 6 18.894506544723516 37.01895813355594 34.969638147238335 9.116897174482206 7 80.43288352571236 2.7889839917284887 15.688390592254963 1.0897418903041876 8 80.9395717979739 2.462248943267855 15.43588705688216 1.1622922018760915 9 76.84144911811282 4.8979219702647185 16.472153806660533 1.788475104961937 10 34.10297876577823 30.67494421320739 25.23593400120141 9.98614301981296 11 24.84505464874851 26.168354226572944 33.61614160372399 15.37044952095456 12 24.817056177348654 23.77005560250706 34.79265935688869 16.620228863255594 13 20.0502679253262 28.446252957459784 35.476649727483704 16.026829389730317 14 16.934936854717677 31.186870074807 34.9858682080267 16.892324862448618 15 16.39113282591223 29.015081024213828 39.54483408804194 15.048952061832004 16 18.28144994578125 27.955406776406015 38.66537171042209 15.09777156739064 17 17.84375559726947 28.607195671811358 34.24859668169618 19.300452049222994 18 18.467287374887892 29.622900033818016 35.90677866917381 16.00303392212028 19 20.751522942257843 31.09311075949572 32.10448279451902 16.050883503727416 20 21.741168680767636 30.109866519065797 33.25009230442939 14.898872495737184 21 20.118162601930926 30.409249712094237 34.51778290903471 14.954804776940122 22 19.871349287073564 28.767621093388808 33.659852843138076 17.701176776399553 23 17.60075731662133 31.852431890323587 33.55296722368322 16.993843569371872 24 17.22772456487595 30.999868736958565 36.68840805088609 15.083998647279396 25 17.459924358864104 32.326336733024554 34.379148445567544 15.8345904625438 26 16.975285691099913 34.423376977755765 32.228568398713755 16.37276893243057 27 16.711207729905926 33.66787088113711 33.66838817391125 15.952533215045719 28 15.760035641472136 32.5602823901254 36.03215750530387 15.647524463098597 29 16.64777470347808 30.356421187536085 35.97771244082655 17.018091668159272 30 17.084693112828667 33.02403536213404 34.381670247841434 15.50960127719586 31 19.498316535328186 32.295945782544344 32.68184619204624 15.523891490081235 32 19.883053036088285 31.600962940499045 32.881779849247955 15.634204174164717 33 19.493984208344838 32.59681619229842 31.69329970068147 16.21589989867528 34 17.66755274608102 32.9534895600619 31.752659046513028 17.626298647344058 35 18.00877199221733 33.19351340725878 31.32097822650052 17.476736374023368 36 20.520293072221186 33.874400021209006 28.838231557057714 16.767075349512094 37 18.153872615361138 35.00727119655638 30.36359862477716 16.47525756330532 38 18.18549213617991 35.49902263996488 28.918282613854522 17.397202610000694 39 18.169520721778607 35.31163333253584 28.849547336491838 17.669298609193714 40 20.037076959585857 33.862049656226624 28.78527370930603 17.31559967488149 41 17.025786398174475 33.00353763595909 30.46175492866856 19.508921037197876 42 18.539449716879197 33.25403666183214 28.452654455539655 19.75385916574901 43 18.54785572445883 33.775015146979044 28.92119238570901 18.755936742853116 44 18.160274113441012 34.672582771693484 28.532188219562332 18.634954895303178 45 17.666259514145693 35.69824501960216 27.30840283916139 19.327092627090753 46 18.81445548792671 35.59491578796945 27.803710670392036 17.786918053711805 47 18.292571740425075 34.172748628689185 29.06021481875678 18.474464812128964 48 18.358332584336505 33.53453866860479 30.240676929324227 17.86645181773448 49 18.371264903689784 33.13214955192746 29.363219061204145 19.13336648317861 50 17.717083529204086 34.554058064820666 29.86835545514328 17.860502950831968 51 17.04259841333374 35.0436110139391 28.617088896116616 19.296701676610542 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1441.0 1 1747.5 2 2054.0 3 34399.0 4 66744.0 5 42702.0 6 18660.0 7 19606.5 8 20553.0 9 24235.5 10 27918.0 11 31508.5 12 35099.0 13 36355.5 14 37612.0 15 35959.5 16 34307.0 17 30931.0 18 27555.0 19 24826.0 20 22097.0 21 20244.5 22 18392.0 23 18020.5 24 17649.0 25 17781.0 26 19309.5 27 20706.0 28 23238.0 29 25770.0 30 28958.0 31 32146.0 32 37078.0 33 42010.0 34 46109.0 35 50208.0 36 53943.0 37 57678.0 38 61783.0 39 65888.0 40 75761.0 41 85634.0 42 91788.5 43 97943.0 44 99946.5 45 101950.0 46 104168.0 47 106386.0 48 105279.0 49 104172.0 50 99108.0 51 94044.0 52 86820.5 53 79597.0 54 71353.0 55 63109.0 56 56959.5 57 50810.0 58 45858.0 59 40906.0 60 34850.0 61 28794.0 62 24855.0 63 20916.0 64 16930.0 65 12944.0 66 10021.0 67 7098.0 68 5543.5 69 3989.0 70 3061.0 71 2133.0 72 1714.0 73 1295.0 74 1206.5 75 882.5 76 647.0 77 471.5 78 296.0 79 221.0 80 146.0 81 119.0 82 92.0 83 79.5 84 67.0 85 40.5 86 14.0 87 11.0 88 8.0 89 5.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1546513.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.950779218361724 #Duplication Level Percentage of deduplicated Percentage of total 1 75.72372677842198 22.679846223320617 2 7.814094011706853 4.680764090723087 3 3.8162679665742245 3.4290059791491245 4 2.2838492773690304 2.736122618979792 5 1.5076325333779477 2.2577384574811137 6 1.0603633272717292 1.9055224743817802 7 0.8087949177488705 1.6956826610100613 8 0.6038842260385977 1.4469442502026628 9 0.4814326370011163 1.2977354357400703 >10 4.964472659691748 33.423511615675636 >50 0.8658342209683454 17.131411788734827 >100 0.06594742423331183 2.7715052599788255 >500 0.0023941303269866066 0.5136110149258266 >1k 0.0010882410577211848 0.5331672155195248 >5k 0.0 0.0 >10k+ 2.1764821154423696E-4 3.4974309141769835 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 53652 3.469223989711047 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTT 2106 0.13617732279004444 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1856 0.12001192359844372 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCT 1647 0.10649764987426552 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.466159676640286E-5 0.0 0.0 0.04435785538175237 0.0 2 6.466159676640286E-5 0.0 0.0 0.14025100338632782 0.0 3 6.466159676640286E-5 0.0 0.0 0.234010318697612 0.0 4 6.466159676640286E-5 0.0 0.0 0.3386327822656518 0.0 5 6.466159676640286E-5 0.0 0.0 0.5931408271382135 0.0 6 6.466159676640286E-5 0.0 0.0 1.030253221279097 0.0 7 6.466159676640286E-5 0.0 0.0 1.3102379352776212 0.0 8 6.466159676640286E-5 0.0 0.0 1.6894135387158078 0.0 9 6.466159676640286E-5 0.0 0.0 1.8855968233050742 0.0 10 6.466159676640286E-5 0.0 0.0 2.0947124272476207 0.0 11 6.466159676640286E-5 0.0 0.0 2.326847559639007 0.0 12 6.466159676640286E-5 0.0 0.0 2.474340661863172 0.0 13 6.466159676640286E-5 0.0 0.0 2.5609225399333857 0.0 14 6.466159676640286E-5 0.0 0.0 2.6094187375081876 0.0 15 6.466159676640286E-5 0.0 0.0 2.6537119312931736 0.0 16 6.466159676640286E-5 0.0 0.0 2.7271675052198074 0.0 17 6.466159676640286E-5 0.0 0.0 2.8180170486766034 0.0 18 6.466159676640286E-5 0.0 0.0 2.9215402650996145 0.0 19 1.2932319353280573E-4 0.0 0.0 2.993961253477986 0.0 20 1.2932319353280573E-4 0.0 0.0 3.067416827404619 0.0 21 1.2932319353280573E-4 0.0 0.0 3.1596242643935097 0.0 22 1.2932319353280573E-4 0.0 0.0 3.2634061272035866 0.0 23 1.2932319353280573E-4 0.0 0.0 3.385810529882387 0.0 24 1.2932319353280573E-4 0.0 0.0 3.4805397691451674 0.0 25 1.2932319353280573E-4 0.0 0.0 3.572294574956693 0.0 26 1.2932319353280573E-4 0.0 0.0 3.657518559494812 0.0 27 1.2932319353280573E-4 0.0 0.0 3.754704939434715 0.0 28 1.2932319353280573E-4 0.0 0.0 3.8503394410522254 0.0 29 1.2932319353280573E-4 0.0 0.0 3.962527311441934 0.0 30 1.2932319353280573E-4 0.0 0.0 4.089716672281448 0.0 31 1.2932319353280573E-4 0.0 0.0 4.201581234687326 0.0 32 1.2932319353280573E-4 0.0 0.0 4.315191660205896 0.0 33 1.2932319353280573E-4 0.0 0.0 4.431647195982187 0.0 34 1.2932319353280573E-4 0.0 0.0 4.555344830596316 0.0 35 1.2932319353280573E-4 0.0 0.0 4.695595833982644 0.0 36 1.2932319353280573E-4 0.0 0.0 4.828281430547302 0.0 37 1.2932319353280573E-4 0.0 0.0 4.964523414934113 0.0 38 1.2932319353280573E-4 0.0 0.0 5.110917270013249 0.0 39 1.2932319353280573E-4 0.0 0.0 5.299341162990547 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 130 0.0 45.000004 28 CGTTGCG 20 7.034044E-4 45.0 1 CGCGATG 20 7.034044E-4 45.0 1 AACGGCT 20 7.034044E-4 45.0 44 TACGTAC 20 7.034044E-4 45.0 24 CGTTTTT 20640 0.0 44.498547 1 TATAGCG 110 0.0 42.954544 1 CGTTAGG 225 0.0 42.0 2 GGTACGA 65 0.0 41.538464 8 TTGCGAG 145 0.0 40.34483 1 CGGTCTA 145 0.0 40.34483 31 CGGGTTC 90 0.0 40.0 6 GTTTTTT 23270 0.0 39.778683 2 CGTGCGG 85 0.0 39.705883 2 TAATGCG 85 0.0 39.705883 1 TACGGGA 505 0.0 39.65346 4 CGGGTAT 165 0.0 39.545452 6 TCGCGAG 40 3.459263E-7 39.375 1 ACGGGTC 115 0.0 39.130432 5 TAGGGCG 530 0.0 39.056602 5 >>END_MODULE