SRR1547416_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547416_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3803032
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29298	0.7703853136129278	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGATC	25	3.8925114E-5	45.0	44
TTACGCG	110	0.0	42.954544	1
CGTTTTT	14910	0.0	42.751507	1
TCGTCCC	1485	0.0	40.60606	38
AGGGCGA	3395	0.0	40.427097	6
CTCGTCC	1515	0.0	39.653465	37
GGGCGAT	6230	0.0	39.47432	7
CGTAAGG	665	0.0	39.24812	2
GGCGATA	1175	0.0	38.87234	8
CCGCGAA	35	6.252094E-6	38.57143	15
TAATCGT	270	0.0	38.333336	21
TACGGGT	765	0.0	38.235294	4
AGGGTAC	2250	0.0	38.2	6
CGTTAGG	655	0.0	38.129772	2
TAGTGCG	290	0.0	38.017242	1
TATACGG	385	0.0	37.987015	2
CGCATCG	90	0.0	37.5	21
GGCGATT	1855	0.0	37.479786	8
GTAGGGA	4230	0.0	37.39362	4
TAGGGCA	2510	0.0	37.290836	5