##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547415_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2680645 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.280830919424243 31.0 31.0 33.0 30.0 34.0 2 31.696377550925245 31.0 31.0 34.0 30.0 34.0 3 31.79913341751705 31.0 31.0 34.0 30.0 34.0 4 35.58596457195936 37.0 35.0 37.0 33.0 37.0 5 35.475386707303656 37.0 35.0 37.0 33.0 37.0 6 35.51345254593577 37.0 35.0 37.0 33.0 37.0 7 35.9168882862147 37.0 35.0 37.0 35.0 37.0 8 35.89137726181572 37.0 35.0 37.0 35.0 37.0 9 37.60030626957318 39.0 37.0 39.0 35.0 39.0 10 36.874587645883736 39.0 37.0 39.0 32.0 39.0 11 36.60423144429792 39.0 35.0 39.0 32.0 39.0 12 36.225760591200995 38.0 35.0 39.0 32.0 39.0 13 36.06208244657536 38.0 35.0 39.0 31.0 39.0 14 37.13990886521714 39.0 35.0 41.0 31.0 41.0 15 37.272019980265945 39.0 35.0 41.0 32.0 41.0 16 37.33822941866603 39.0 35.0 41.0 32.0 41.0 17 37.26143558733066 39.0 35.0 41.0 32.0 41.0 18 37.10696604735055 39.0 35.0 41.0 32.0 41.0 19 37.05535085772267 39.0 35.0 41.0 31.0 41.0 20 36.903144579009904 39.0 35.0 41.0 31.0 41.0 21 36.78769437952433 38.0 35.0 41.0 31.0 41.0 22 36.7059371904896 38.0 35.0 40.0 31.0 41.0 23 36.603784909975026 38.0 35.0 40.0 31.0 41.0 24 36.46381076196214 38.0 35.0 40.0 30.0 41.0 25 36.386133188094654 38.0 35.0 40.0 30.0 41.0 26 36.244938438323615 38.0 35.0 40.0 30.0 41.0 27 36.155865845719966 38.0 35.0 40.0 30.0 41.0 28 36.21727569297688 38.0 35.0 40.0 30.0 41.0 29 36.23077169860239 38.0 35.0 40.0 30.0 41.0 30 36.16834120146457 38.0 35.0 40.0 30.0 41.0 31 36.03465770364968 38.0 35.0 40.0 30.0 41.0 32 35.91555502500331 38.0 35.0 40.0 29.0 41.0 33 35.68290057057163 38.0 34.0 40.0 28.0 41.0 34 35.42918439405442 38.0 34.0 40.0 27.0 41.0 35 35.25063594769169 38.0 34.0 40.0 26.0 41.0 36 35.10649339990935 38.0 34.0 40.0 25.0 41.0 37 35.01355793102033 38.0 34.0 40.0 25.0 41.0 38 34.923209526065556 38.0 34.0 40.0 24.0 41.0 39 34.86497801835006 38.0 34.0 40.0 24.0 41.0 40 34.703515758334284 38.0 34.0 40.0 24.0 41.0 41 34.61222914634351 37.0 33.0 40.0 23.0 41.0 42 34.539260886838804 37.0 33.0 40.0 23.0 41.0 43 34.48152515532642 37.0 33.0 40.0 23.0 41.0 44 34.360820250350194 37.0 33.0 40.0 23.0 41.0 45 34.276169727808046 37.0 33.0 40.0 23.0 41.0 46 34.18816553478734 37.0 33.0 40.0 23.0 41.0 47 34.03464166273415 36.0 33.0 40.0 23.0 41.0 48 33.978904703905215 36.0 33.0 40.0 23.0 41.0 49 33.85942301199898 36.0 33.0 40.0 22.0 41.0 50 33.796523224820895 36.0 33.0 40.0 22.0 41.0 51 33.34001742118035 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 3.0 12 8.0 13 20.0 14 45.0 15 111.0 16 272.0 17 701.0 18 1497.0 19 2852.0 20 4797.0 21 7658.0 22 11506.0 23 16934.0 24 23621.0 25 34097.0 26 45931.0 27 54055.0 28 58885.0 29 64960.0 30 74860.0 31 88494.0 32 107387.0 33 135569.0 34 205291.0 35 260689.0 36 220147.0 37 271950.0 38 386937.0 39 601215.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.4758780069722 24.133594713212677 27.828265212290326 15.562262067524793 2 31.46634485357069 25.74589324584195 29.301343519936434 13.486418380650925 3 28.153709275193094 25.30058996995126 32.901372617411106 13.644328137444534 4 24.761204859278273 27.98762984281768 32.636921337961574 14.614243959942478 5 22.12157894835012 32.21235933889046 32.122418298581124 13.543643414178305 6 21.91002538568143 40.23770398542142 28.069363903090487 9.782906725806662 7 88.4466984624969 2.9091505962184474 7.452982397893044 1.191168543391609 8 88.69936153425762 2.473919523099851 7.410418015067269 1.4163009275752665 9 83.72425293166384 5.141449166152176 8.920502341787143 2.213795560396845 10 39.071939775688314 32.29625705753653 16.595259722939815 12.036543443835345 11 31.95689843302638 25.324502125421304 25.91648651723746 16.80211292431486 12 30.36205838520207 21.958260045623348 29.22057937548612 18.45910219368846 13 24.081853434527883 26.363804233682565 30.779905582425126 18.774436749364426 14 20.00335740092403 28.14781517134869 31.701735962799997 20.147091464927282 15 19.210525824941385 26.72188969445786 36.20464477765613 17.862939702944626 16 23.471701773267252 24.512570668626392 34.1159310539068 17.89979650419955 17 23.287231244719088 25.234561085111977 29.67699937888083 21.801208291288106 18 23.08168369925895 25.58943836278209 32.067170401153454 19.26170753680551 19 25.577389023910293 27.2099811799026 28.373245991170037 18.839383805017075 20 26.332281969451383 27.019765765328867 29.416950025087246 17.231002240132508 21 25.864894456371506 26.249204948808963 30.66702230246825 17.21887829235128 22 25.045315586360744 23.910625987402288 30.425102913664436 20.618955512572533 23 22.11303622822119 26.98925072137489 30.472293048874434 20.42542000152948 24 22.12751035664924 25.772304799777668 32.80893217863611 19.291252664936984 25 22.06413008809447 27.50733498840764 30.575775606244022 19.85275931725387 26 20.966856857211607 29.08016540795219 29.121349525953644 20.831628208882563 27 20.417287630402384 29.02570090407346 31.18189838639581 19.375113079128344 28 19.02974843740965 28.19847462084685 32.70347248516682 20.068304456576683 29 20.98771004739531 27.050094287009287 31.927651740532596 20.034543925062813 30 21.983776292645988 27.257320532931438 31.1984615642877 19.560441610134873 31 23.920810103538514 27.243853624780602 29.366141357770235 19.469194913910645 32 25.017411854236578 26.928892113651752 29.22229538040285 18.831400651708822 33 24.35786909493797 27.327676734517254 28.600206293634557 19.71424787691022 34 21.407795511901053 28.10599687761714 30.234924803545415 20.25128280693639 35 21.260032566788965 28.151545616819835 30.25040615225067 20.33801566414053 36 24.051226477209774 28.40025441638113 27.80103296035096 19.747486146058133 37 21.89204463851051 30.444799665752086 28.204741769238375 19.458413926499034 38 22.725015807762684 30.047171482982645 26.956422801228808 20.271389908025867 39 21.30293268970714 29.817487955324186 28.04492948525448 20.83464986971419 40 23.256529678491557 27.6113771125979 27.8958981886822 21.23619502022834 41 20.166564390286666 27.32607264296466 29.151155785268095 23.356207181480578 42 21.39541043293685 27.913282064577743 28.194893393194548 22.49641410929086 43 21.168935088383577 27.537588901178633 28.73789703597455 22.555578974463238 44 20.444743709070018 28.62669245647969 28.814333863678332 22.11422997077196 45 20.79320462052976 29.891425384562297 27.407470963145066 21.907899031762877 46 21.784831635669775 29.76802224837679 27.471112362882817 20.976033753070624 47 20.990619794862802 28.618783912080858 29.08445542024401 21.306140872812325 48 21.41797962803728 27.631111169140265 29.975658843300774 20.975250359521684 49 21.72186171611683 27.299847611302503 30.07500060619739 20.903290066383278 50 20.994984416064042 28.705777900467982 28.84447586308519 21.45476182038278 51 19.5276509944435 29.212185873176043 28.396337448636427 22.863825683744025 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1870.0 1 3055.0 2 4240.0 3 22709.5 4 41179.0 5 28362.0 6 15545.0 7 15486.5 8 15428.0 9 16381.5 10 17335.0 11 17694.5 12 18054.0 13 17797.0 14 17540.0 15 17017.0 16 16494.0 17 15439.0 18 14384.0 19 13955.5 20 13527.0 21 14658.0 22 15789.0 23 16859.0 24 17929.0 25 21185.5 26 28914.5 27 33387.0 28 40981.0 29 48575.0 30 54469.5 31 60364.0 32 66458.0 33 72552.0 34 81482.5 35 90413.0 36 98451.0 37 106489.0 38 114379.0 39 122269.0 40 133090.0 41 143911.0 42 157500.0 43 171089.0 44 178267.5 45 185446.0 46 185301.5 47 185157.0 48 183381.5 49 181606.0 50 175667.0 51 169728.0 52 163991.0 53 158254.0 54 148946.0 55 139638.0 56 135544.5 57 131451.0 58 121322.5 59 111194.0 60 104182.5 61 97171.0 62 86548.0 63 75925.0 64 65301.5 65 54678.0 66 46840.5 67 39003.0 68 32095.5 69 25188.0 70 21525.0 71 17862.0 72 14506.0 73 11150.0 74 8632.5 75 5125.5 76 4136.0 77 3221.5 78 2307.0 79 1762.0 80 1217.0 81 776.5 82 336.0 83 243.5 84 151.0 85 106.5 86 62.0 87 47.0 88 32.0 89 21.5 90 11.0 91 11.0 92 11.0 93 9.5 94 8.0 95 5.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2680645.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.908587480625876 #Duplication Level Percentage of deduplicated Percentage of total 1 80.286349825711 17.589605186567216 2 6.7819972345797686 2.9716795941430725 3 2.3386980583531436 1.5371271300659919 4 1.273789945264005 1.1162775379103238 5 0.8840424835022774 0.9684061043199701 6 0.646432452635544 0.8497453163328816 7 0.4728377125574953 0.7251444472793442 8 0.395575075742347 0.6933192921645134 9 0.3295479243680188 0.6497936577067878 >10 4.16937647989375 21.822659290098674 >50 1.5735982903113086 24.906340342900066 >100 0.8463785829635171 24.974435765554436 >500 6.879670590202113E-4 0.09812123609112917 >1k 5.159752942651585E-4 0.1488398166512904 >5k 0.0 0.0 >10k+ 1.7199176475505282E-4 0.9485052822142487 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25172 0.9390277339968552 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.460890942291874E-5 0.0 0.0 0.01827918280861509 0.0 2 7.460890942291874E-5 0.0 0.0 0.05938869190064332 0.0 3 7.460890942291874E-5 0.0 0.0 0.09139591404307545 0.0 4 7.460890942291874E-5 0.0 0.0 0.1628712492702316 0.0 5 1.1191336413437811E-4 0.0 0.0 0.3022406920722438 0.0 6 1.1191336413437811E-4 0.0 0.0 0.5174127868479415 0.0 7 1.1191336413437811E-4 0.0 0.0 0.6352202548267302 0.0 8 1.1191336413437811E-4 0.0 0.0 0.8691937947770033 0.0 9 1.1191336413437811E-4 0.0 0.0 0.9748027060651447 0.0 10 1.1191336413437811E-4 0.0 0.0 1.1579302742436988 0.0 11 1.1191336413437811E-4 0.0 0.0 1.3545247505730897 0.0 12 1.1191336413437811E-4 0.0 0.0 1.5079579728013222 0.0 13 1.1191336413437811E-4 0.0 0.0 1.5844694094145253 0.0 14 1.1191336413437811E-4 0.0 0.0 1.6226318665843482 0.0 15 1.1191336413437811E-4 0.0 0.0 1.6674345166928108 0.0 16 1.1191336413437811E-4 0.0 0.0 1.752861717982053 0.0 17 1.1191336413437811E-4 0.0 0.0 1.8537702679765504 0.0 18 1.1191336413437811E-4 0.0 0.0 1.9753454858811965 0.0 19 1.1191336413437811E-4 0.0 0.0 2.0531998828640123 0.0 20 1.1191336413437811E-4 0.0 0.0 2.139858131158732 0.0 21 1.1191336413437811E-4 0.0 0.0 2.2637089208007772 0.0 22 1.1191336413437811E-4 0.0 0.0 2.395057905839826 0.0 23 1.1191336413437811E-4 0.0 0.0 2.5484538236133467 0.0 24 1.1191336413437811E-4 0.0 0.0 2.6616355392079143 0.0 25 1.1191336413437811E-4 0.0 0.0 2.7680278440449966 0.0 26 1.1191336413437811E-4 0.0 0.0 2.870391267773241 0.0 27 1.1191336413437811E-4 0.0 0.0 2.9736873028692723 0.0 28 1.1191336413437811E-4 0.0 0.0 3.0842577066340375 0.0 29 1.1191336413437811E-4 0.0 0.0 3.211204766017134 0.0 30 1.1191336413437811E-4 0.0 0.0 3.348932812811842 0.0 31 1.1191336413437811E-4 0.0 0.0 3.481363627037523 0.0 32 1.1191336413437811E-4 0.0 0.0 3.6124887853483023 0.0 33 1.1191336413437811E-4 0.0 0.0 3.7424948100177384 0.0 34 1.1191336413437811E-4 0.0 0.0 3.8819761661838847 0.0 35 1.1191336413437811E-4 0.0 0.0 4.025635621277715 0.0 36 1.1191336413437811E-4 0.0 0.0 4.1690339451885645 0.0 37 1.1191336413437811E-4 0.0 0.0 4.318550199672094 0.0 38 1.1191336413437811E-4 0.0 0.0 4.48716633496789 0.0 39 1.1191336413437811E-4 0.0 0.0 4.7296079861376645 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 13810 0.0 42.230267 1 GTCAACG 100 0.0 40.5 1 TAGGGAC 2750 0.0 39.19091 5 TACGCGG 110 0.0 38.863636 2 CGTTAGG 285 0.0 38.68421 2 GGCGATA 860 0.0 38.4593 8 GGGCGAT 3950 0.0 38.392406 7 AGGGCGA 2355 0.0 37.834396 6 CGGTCTA 155 0.0 37.74194 31 TCGAATA 30 1.1403275E-4 37.500004 45 CATACGA 505 0.0 37.425743 18 CGTAAGG 440 0.0 37.329544 2 TTAGGGA 3390 0.0 37.035397 4 GGCGATT 1155 0.0 37.012985 8 CACTCGA 55 2.752131E-9 36.81818 39 CGTATGG 350 0.0 36.642857 2 GCGATAT 240 0.0 36.562504 9 TAAGGGA 3240 0.0 36.38889 4 AAGGGAT 3585 0.0 36.338913 5 TATGGGA 3040 0.0 36.266445 4 >>END_MODULE