SRR1547414_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547414_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1830981
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36722	2.0055915380880522	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGAT	20	7.0343824E-4	45.000004	15
CGTGGCA	20	7.0343824E-4	45.000004	12
AGACTCG	20	7.0343824E-4	45.000004	37
TCGCATA	20	7.0343824E-4	45.000004	12
ACGTTAG	30	2.1662108E-6	45.000004	1
ATCCGAA	30	2.1662108E-6	45.000004	11
ACGATTC	20	7.0343824E-4	45.000004	24
GTTACGA	30	2.1662108E-6	45.000004	18
CACTACG	30	2.1662108E-6	45.000004	1
ACTACGC	20	7.0343824E-4	45.000004	22
ACAGCGT	20	7.0343824E-4	45.000004	25
TGTTACG	65	0.0	45.000004	1
TCGTACT	20	7.0343824E-4	45.000004	44
TTACGAT	30	2.1662108E-6	45.000004	19
TAATGCG	80	0.0	45.000004	1
AGTACGC	40	6.8193913E-9	45.000004	12
GCGTAAT	40	6.8193913E-9	45.000004	11
GTACGAT	20	7.0343824E-4	45.000004	26
CGCATAT	25	3.891716E-5	45.0	13
CGCGACA	25	3.891716E-5	45.0	19