##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547414_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1830981 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.345273380772383 31.0 31.0 33.0 30.0 34.0 2 31.750916038997673 31.0 31.0 34.0 30.0 34.0 3 31.74704925938609 31.0 31.0 34.0 30.0 34.0 4 35.57871873056028 37.0 35.0 37.0 33.0 37.0 5 35.49084616388701 37.0 35.0 37.0 33.0 37.0 6 35.53363306336876 37.0 35.0 37.0 33.0 37.0 7 35.95603340504353 37.0 35.0 37.0 35.0 37.0 8 35.95677453780241 37.0 35.0 37.0 35.0 37.0 9 37.693920909064595 39.0 37.0 39.0 35.0 39.0 10 36.97340332859817 39.0 37.0 39.0 32.0 39.0 11 36.67364653155877 39.0 35.0 39.0 32.0 39.0 12 36.15417909852697 38.0 35.0 39.0 32.0 39.0 13 35.88532759214869 38.0 35.0 39.0 31.0 39.0 14 36.99981813028098 39.0 35.0 41.0 31.0 41.0 15 37.215009877218826 39.0 35.0 41.0 32.0 41.0 16 37.3256101510611 39.0 35.0 41.0 32.0 41.0 17 37.2656297361906 39.0 35.0 41.0 32.0 41.0 18 37.11796353976366 39.0 35.0 40.0 32.0 41.0 19 36.9731662971926 38.0 35.0 40.0 32.0 41.0 20 36.744949838365336 38.0 35.0 40.0 32.0 41.0 21 36.607995932235234 38.0 35.0 40.0 31.0 41.0 22 36.51696658785645 38.0 35.0 40.0 31.0 41.0 23 36.42869368933921 38.0 35.0 40.0 31.0 41.0 24 36.265564743708424 38.0 35.0 40.0 31.0 41.0 25 36.17233603188673 37.0 35.0 40.0 31.0 41.0 26 35.979437798644554 37.0 35.0 40.0 30.0 41.0 27 35.867218720456414 37.0 35.0 40.0 30.0 41.0 28 35.90304978587981 37.0 35.0 40.0 30.0 41.0 29 35.90031791700733 37.0 35.0 40.0 30.0 41.0 30 35.81940719210085 37.0 35.0 40.0 30.0 41.0 31 35.6423070474243 37.0 34.0 40.0 30.0 41.0 32 35.41622332509185 37.0 34.0 40.0 29.0 41.0 33 35.08607790031682 37.0 34.0 40.0 27.0 41.0 34 34.748197824008 37.0 34.0 40.0 24.0 41.0 35 34.48329775131473 36.0 34.0 40.0 23.0 41.0 36 34.25413207455457 36.0 33.0 40.0 23.0 41.0 37 34.110315726924526 36.0 33.0 40.0 22.0 41.0 38 34.04412771077362 36.0 33.0 40.0 22.0 41.0 39 34.02176210457673 36.0 33.0 40.0 22.0 41.0 40 33.86369601869162 36.0 33.0 40.0 21.0 41.0 41 33.79771335693817 36.0 33.0 40.0 21.0 41.0 42 33.70660809697097 36.0 33.0 40.0 20.0 41.0 43 33.6200954570255 35.0 33.0 40.0 20.0 41.0 44 33.49679871063654 35.0 33.0 40.0 19.0 41.0 45 33.41542429986985 35.0 33.0 40.0 20.0 41.0 46 33.33701005089621 35.0 33.0 40.0 20.0 41.0 47 33.21121082086597 35.0 33.0 40.0 19.0 41.0 48 33.15749535358368 35.0 33.0 40.0 18.0 41.0 49 33.06005578430361 35.0 32.0 40.0 18.0 41.0 50 32.93856135044547 35.0 32.0 39.0 18.0 41.0 51 32.47456636633586 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 4.0 13 10.0 14 14.0 15 67.0 16 183.0 17 420.0 18 953.0 19 1936.0 20 3371.0 21 5558.0 22 8375.0 23 13242.0 24 19493.0 25 29152.0 26 39581.0 27 43727.0 28 44453.0 29 46048.0 30 51714.0 31 60734.0 32 74459.0 33 95455.0 34 154208.0 35 229819.0 36 161379.0 37 165220.0 38 224337.0 39 356917.0 40 147.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.702864748459977 24.187634934496863 29.373270394395135 17.736229922648022 2 34.53329117014322 25.63379958612351 27.623388773559093 12.209520470174185 3 26.298088292560106 24.306915254718646 35.62085024366719 13.774146209054052 4 23.59642180885547 26.504480385105033 35.51593380816076 14.383163997878734 5 21.49694617257088 30.91326452868708 34.81882116745068 12.770968131291369 6 19.761810745168848 39.6447041230903 31.13183588469787 9.46164924704298 7 83.86624437937914 3.634226679577778 11.236708627779315 1.262820313263764 8 84.49694453410494 2.870210013102266 10.86985610445985 1.7629893483329429 9 80.47816989908688 5.16979695583952 12.239832090010765 2.1122010550628323 10 41.987983490817214 26.05291917283686 20.67711243317107 11.281984903174855 11 35.27338623393689 25.29785945348422 24.531002779384384 14.8977515331945 12 31.724250552026483 23.384076623405704 28.74513716963748 16.146535654930336 13 20.03374147519827 35.121445826035334 29.471687581684353 15.373125117082045 14 16.400716337307706 36.79470185654575 30.72828172438709 16.076300081759452 15 15.517692428266598 29.085828853494384 40.489879468984114 14.906599249254906 16 16.79383893115221 26.217694230579124 40.353722949610074 16.634743888658594 17 16.845887532421145 26.901535297198603 30.580983636640685 25.67159353373956 18 19.38976974638186 29.196152226593284 33.41771432909462 17.996363697930235 19 22.527595862545816 31.317747153028897 28.144857865810728 18.009799118614556 20 25.012820995957902 28.81488120302723 29.68649046603979 16.485807334975075 21 20.3316145825653 31.175582925218777 31.02888560831598 17.46391688389994 22 21.242055488287427 28.81772121065156 28.580143649770264 21.360079651290757 23 17.975172871810248 32.92977917302255 27.93726423157859 21.15778372358861 24 18.004064487834665 29.960441970724982 36.041881373973844 15.993612167466512 25 16.692144811988765 31.56335319700204 33.79188533359986 17.952616657409333 26 16.883790711099678 36.122275435954826 28.97856395014476 18.01536990280074 27 16.88335378684978 36.21807107774466 30.305939821330753 16.592635314074805 28 15.596174946654278 33.26271545144379 34.86180359053426 16.279306011367677 29 15.911634255079655 29.670051191137432 35.00418628046933 19.414128273313594 30 17.171833022844037 33.9523457643744 31.77050990698429 17.105311305797276 31 22.33414765090408 32.220104960127934 28.638691499256407 16.80705588971158 32 22.94633314054051 31.007257857946097 29.84187165240928 16.204537349104115 33 22.318090684720378 31.9465357641614 27.610991047968277 18.12438250314995 34 18.469552660568297 32.60732907659883 28.91133223119191 20.011786031640963 35 18.476598064097878 31.400325836259363 30.47989028832085 19.64318581132191 36 24.501783470172548 31.209389939054528 26.89093988413861 17.397886706634313 37 19.048804984868767 34.980373908849955 29.370703464426995 16.600117641854283 38 19.068302729520404 35.208557598358475 27.039712591228415 18.6834270808927 39 18.834329793700753 35.14913590037253 27.86134864315905 18.155185662767664 40 21.48498537122996 31.554560096472873 26.640800751072785 20.319653781224382 41 17.176366111936716 30.579618248359758 28.8173389019329 23.426676737770627 42 19.84007480143158 31.314306374560957 26.78848114753785 22.05713767646961 43 20.103321661994308 31.804644614007465 27.309240237883408 20.78279348611482 44 18.37501317599691 33.9631050240281 27.448673689131674 20.213208110843315 45 17.303292606531688 37.249758462813105 25.288137888924023 20.15881104173118 46 20.464166476877697 35.856680107548904 25.839317830168635 17.839835585404764 47 19.572021774119992 32.625952972750675 27.96517276804074 19.836852485088592 48 19.89927803729258 30.527296569434636 30.575576699048213 18.997848694224572 49 20.000808309862308 30.527624262622062 29.203634554372766 20.267932873142865 50 18.56491137810824 34.37954844971084 28.11154239175611 18.94399778042481 51 17.046053454405044 35.22991227107217 26.37209233738635 21.35194193713643 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1995.0 1 2491.0 2 2987.0 3 24686.0 4 46385.0 5 30400.0 6 14415.0 7 15735.0 8 17055.0 9 20687.5 10 24320.0 11 27521.0 12 30722.0 13 31637.5 14 32553.0 15 29872.5 16 27192.0 17 24592.0 18 21992.0 19 20220.5 20 18449.0 21 17489.5 22 16530.0 23 16577.5 24 16625.0 25 17097.5 26 19477.0 27 21384.0 28 23295.0 29 25206.0 30 31163.5 31 37121.0 32 41265.5 33 45410.0 34 50244.5 35 55079.0 36 57893.5 37 60708.0 38 69228.0 39 77748.0 40 92241.0 41 106734.0 42 126906.0 43 147078.0 44 151804.0 45 156530.0 46 153687.5 47 150845.0 48 147264.5 49 143684.0 50 134501.0 51 125318.0 52 113325.0 53 101332.0 54 88371.5 55 75411.0 56 67148.5 57 58886.0 58 53384.0 59 47882.0 60 42918.5 61 37955.0 62 30839.5 63 23724.0 64 19588.5 65 15453.0 66 13327.0 67 11201.0 68 9260.0 69 7319.0 70 5767.5 71 4216.0 72 3501.0 73 2786.0 74 2059.0 75 1152.5 76 973.0 77 741.0 78 509.0 79 341.5 80 174.0 81 137.5 82 101.0 83 76.0 84 51.0 85 37.5 86 24.0 87 14.5 88 5.0 89 4.5 90 4.0 91 3.5 92 3.0 93 3.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1830981.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.0381276562879 #Duplication Level Percentage of deduplicated Percentage of total 1 79.34513445004822 19.866536052656343 2 7.8669609926270745 3.9394794720086805 3 3.0434281584638514 2.286052282330773 4 1.7437291450824774 1.7463885173025933 5 1.1563417098649564 1.44763156729445 6 0.8110266984908444 1.2183954005682887 7 0.59003454609071 1.0341352200647358 8 0.44118501360800727 0.8837157352606718 9 0.3731133220460152 0.8407853088884807 >10 2.9906341140343606 16.42692118228898 >50 0.8076066961223001 14.565624381283213 >100 0.8268562513403123 32.942380605977824 >500 0.0028519849083598683 0.4627261871163997 >1k 8.775338179568826E-4 0.3221066430734292 >5k 0.0 0.0 >10k+ 2.1938345448922064E-4 2.017121443885141 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36722 2.0055915380880522 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.027471612212251247 0.0 2 0.0 0.0 0.0 0.18421818686267089 0.0 3 0.0 0.0 0.0 0.3008769615850738 0.0 4 0.0 0.0 0.0 0.49263209175846173 0.0 5 0.0 0.0 0.0 0.8914893163828571 0.0 6 0.0 0.0 0.0 1.386961415765647 0.0 7 0.0 0.0 0.0 1.6626060019191897 0.0 8 0.0 0.0 0.0 2.109033354251082 0.0 9 0.0 0.0 0.0 2.302317719299108 0.0 10 0.0 0.0 0.0 2.6254232020976733 0.0 11 0.0 0.0 0.0 3.1422499741941614 0.0 12 0.0 0.0 0.0 3.4856724346129204 0.0 13 0.0 0.0 0.0 3.6495736438553976 0.0 14 0.0 0.0 0.0 3.7188261374640152 0.0 15 0.0 0.0 0.0 3.806047140849632 0.0 16 0.0 0.0 0.0 3.989555325806221 0.0 17 0.0 0.0 0.0 4.216755935752474 0.0 18 0.0 0.0 0.0 4.461706593350778 0.0 19 0.0 0.0 0.0 4.606219289004091 0.0 20 0.0 0.0 0.0 4.74259427050308 0.0 21 0.0 0.0 0.0 4.945709431173781 0.0 22 0.0 0.0 0.0 5.158054616623548 0.0 23 0.0 0.0 0.0 5.402131425722058 0.0 24 0.0 0.0 0.0 5.586841152365863 0.0 25 0.0 0.0 0.0 5.7441884978598905 0.0 26 0.0 0.0 0.0 5.888865040106915 0.0 27 0.0 0.0 0.0 6.028790031136315 0.0 28 0.0 0.0 0.0 6.184171217505807 0.0 29 0.0 0.0 0.0 6.348727813123129 0.0 30 0.0 0.0 0.0 6.5475283468261 0.0 31 0.0 0.0 0.0 6.7286334484082575 0.0 32 0.0 0.0 0.0 6.900890833930008 0.0 33 0.0 0.0 0.0 7.073748990295366 0.0 34 0.0 0.0 0.0 7.252724086159278 0.0 35 0.0 0.0 0.0 7.453490778986784 0.0 36 0.0 0.0 0.0 7.641477437504813 0.0 37 0.0 0.0 0.0 7.827661783492019 0.0 38 0.0 0.0 0.0 8.017887678790768 0.0 39 5.461553123708001E-5 0.0 0.0 8.21592359505642 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGAT 20 7.0343824E-4 45.000004 15 CGTGGCA 20 7.0343824E-4 45.000004 12 AGACTCG 20 7.0343824E-4 45.000004 37 TCGCATA 20 7.0343824E-4 45.000004 12 ACGTTAG 30 2.1662108E-6 45.000004 1 ATCCGAA 30 2.1662108E-6 45.000004 11 ACGATTC 20 7.0343824E-4 45.000004 24 GTTACGA 30 2.1662108E-6 45.000004 18 CACTACG 30 2.1662108E-6 45.000004 1 ACTACGC 20 7.0343824E-4 45.000004 22 ACAGCGT 20 7.0343824E-4 45.000004 25 TGTTACG 65 0.0 45.000004 1 TCGTACT 20 7.0343824E-4 45.000004 44 TTACGAT 30 2.1662108E-6 45.000004 19 TAATGCG 80 0.0 45.000004 1 AGTACGC 40 6.8193913E-9 45.000004 12 GCGTAAT 40 6.8193913E-9 45.000004 11 GTACGAT 20 7.0343824E-4 45.000004 26 CGCATAT 25 3.891716E-5 45.0 13 CGCGACA 25 3.891716E-5 45.0 19 >>END_MODULE