##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547411_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2785597 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.341611510925667 31.0 31.0 33.0 30.0 34.0 2 31.75219387441902 31.0 31.0 34.0 30.0 34.0 3 31.781412386644586 31.0 31.0 34.0 30.0 34.0 4 35.613299052231895 37.0 35.0 37.0 33.0 37.0 5 35.53260288548559 37.0 35.0 37.0 33.0 37.0 6 35.56878615248365 37.0 35.0 37.0 33.0 37.0 7 35.966149087610304 37.0 35.0 37.0 35.0 37.0 8 35.95357978917984 37.0 35.0 37.0 35.0 37.0 9 37.7007295025088 39.0 37.0 39.0 35.0 39.0 10 36.9219887155249 39.0 37.0 39.0 32.0 39.0 11 36.72107200000574 39.0 35.0 39.0 32.0 39.0 12 36.33199490091352 38.0 35.0 39.0 32.0 39.0 13 36.15166838562793 38.0 35.0 39.0 32.0 39.0 14 37.26171517272599 39.0 35.0 41.0 32.0 41.0 15 37.41056477300916 39.0 35.0 41.0 32.0 41.0 16 37.48635247668633 39.0 35.0 41.0 32.0 41.0 17 37.40998895389391 39.0 35.0 41.0 32.0 41.0 18 37.23442586993021 39.0 35.0 41.0 32.0 41.0 19 37.10159258500063 38.0 35.0 41.0 32.0 41.0 20 36.892367776099704 38.0 35.0 41.0 32.0 41.0 21 36.760105643422214 38.0 35.0 40.0 31.0 41.0 22 36.67218804442997 38.0 35.0 40.0 31.0 41.0 23 36.595197008038134 38.0 35.0 40.0 31.0 41.0 24 36.45330390576957 38.0 35.0 40.0 31.0 41.0 25 36.34506606662773 38.0 35.0 40.0 31.0 41.0 26 36.18942294955085 38.0 35.0 40.0 30.0 41.0 27 36.08696053305629 38.0 35.0 40.0 30.0 41.0 28 36.125464308010095 38.0 35.0 40.0 30.0 41.0 29 36.113791406294595 38.0 35.0 40.0 30.0 41.0 30 36.02171132435883 38.0 35.0 40.0 30.0 41.0 31 35.86746108643856 38.0 35.0 40.0 30.0 41.0 32 35.66839065378086 38.0 34.0 40.0 29.0 41.0 33 35.33763354857145 38.0 34.0 40.0 27.0 41.0 34 34.99062678485079 38.0 34.0 40.0 25.0 41.0 35 34.72772694686274 38.0 34.0 40.0 24.0 41.0 36 34.51932206991894 37.0 34.0 40.0 23.0 41.0 37 34.38508405918013 37.0 33.0 40.0 23.0 41.0 38 34.29899874245987 37.0 33.0 40.0 22.0 41.0 39 34.24204865240736 37.0 33.0 40.0 22.0 41.0 40 34.077710092306965 37.0 33.0 40.0 21.0 41.0 41 33.991930993607475 37.0 33.0 40.0 21.0 41.0 42 33.92036249321061 37.0 33.0 40.0 21.0 41.0 43 33.858189106320836 37.0 33.0 40.0 20.0 41.0 44 33.72285402375146 36.0 33.0 40.0 20.0 41.0 45 33.62196110923439 36.0 33.0 40.0 20.0 41.0 46 33.53720333558659 36.0 33.0 40.0 20.0 41.0 47 33.39697486750596 36.0 33.0 40.0 20.0 41.0 48 33.351812914789896 36.0 33.0 40.0 20.0 41.0 49 33.2414918597342 36.0 32.0 40.0 18.0 41.0 50 33.15380473198385 35.0 32.0 40.0 18.0 41.0 51 32.72607380033795 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 3.0 11 3.0 12 9.0 13 14.0 14 32.0 15 99.0 16 222.0 17 670.0 18 1534.0 19 3028.0 20 5213.0 21 8321.0 22 12609.0 23 18833.0 24 28126.0 25 42015.0 26 58469.0 27 65979.0 28 67266.0 29 69659.0 30 76391.0 31 90259.0 32 109267.0 33 139721.0 34 215393.0 35 299165.0 36 239796.0 37 267976.0 38 379784.0 39 585574.0 40 166.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.791674818719287 23.170903759589056 28.650483181881658 18.386938239809993 2 32.95753118631302 25.928014712824577 29.1844082255976 11.930045875264799 3 26.885583234042826 24.71969204447018 36.17917451806561 12.215550203421385 4 23.554950698180676 27.228777170567025 35.36556077566138 13.850711355590919 5 22.132060021603987 31.011449251273604 34.0036265116598 12.852864215462608 6 20.01093481935829 39.53012585811946 30.95314936080129 9.505789961720952 7 85.17965807688621 2.957678371997098 10.73245699216362 1.1302065589530719 8 85.84831186995103 2.4124810588179124 10.345933026205872 1.3932740450251777 9 82.08592269448883 4.305899238116641 11.709698136521544 1.8984799308729872 10 37.91155001961877 24.708204381322926 24.30304886169823 13.077196737360069 11 33.0758182177824 25.46046682273136 25.593939108923507 15.869775850562734 12 29.816480991327893 23.45113094248737 28.830013817504828 17.902374248679905 13 22.109730876361514 29.754734801911404 29.752939854544646 18.38259446718244 14 18.280569658855896 31.880921755731357 31.011664644957616 18.826843940455134 15 18.39052813454351 27.124418930663698 37.67497595668002 16.81007697811277 16 20.4051770589931 24.918859404285687 37.03260019306454 17.643363343656674 17 20.3530158885151 26.138813331576678 30.29648581614641 23.211684963761808 18 21.145377454096913 27.64416389018225 33.099691017760286 18.11076763796055 19 23.906329594697297 28.404252302109747 29.246190313961424 18.443227789231535 20 25.6003650204965 27.922919216239823 29.530007391593255 16.946708371670418 21 22.637481301135807 28.795048242800377 31.40615817722377 17.161312278840047 22 22.626137233777893 25.860596489729133 30.86810475456428 20.645161521928692 23 20.70489737029441 29.210829850836284 29.66635159357222 20.417921185297082 24 20.009642457254227 27.760655974284866 35.03561355070385 17.194088017757057 25 19.318264630526237 28.876179863777857 32.961695464203906 18.843860041492004 26 19.14160591068988 32.0887048629073 29.545982423157408 19.223706803245406 27 18.347485296688646 32.603926555061626 30.583785091669757 18.464803056579974 28 17.484474602751224 30.516295070679643 33.974943252738996 18.024287073830134 29 18.616619704860394 28.46567540100022 33.73700502980151 19.18069986433788 30 19.07601853390853 30.646321057927615 32.30600119112707 17.971659217036777 31 22.190072720497618 29.46355844007586 29.956989471197737 18.389379368228788 32 23.160816155387877 28.95214203633907 29.96793865013496 17.919103158138093 33 23.094941587027844 29.729713235618792 28.238399165421274 18.936946011932093 34 19.54274074821304 29.982836713279053 30.078435610032606 20.395986928475295 35 20.087866263497556 29.740698313503355 30.708533933659467 19.46290148933963 36 24.008641594602523 29.965964208031526 27.85252138051556 18.17287281685039 37 20.28897216646916 32.798068062250216 29.014642103649596 17.89831766763103 38 21.352981066536188 32.15536920810871 27.12484971803172 19.366800007323384 39 21.011689774220752 31.58594010547829 28.278641885383994 19.123728234916967 40 22.25982437516985 29.34889720228734 28.40249325369032 19.988785168852495 41 19.007990028708388 28.879697960616703 29.68010089040159 22.432211120273323 42 20.50048876416797 29.51345797687174 27.86813742260636 22.11791583635393 43 20.642756292457236 29.395458136981052 28.48990719045145 21.471878380110258 44 20.67621411137361 30.70322088945386 27.72425444168701 20.896310557485524 45 19.495820824045975 33.00965645784369 26.398183226073265 21.096339492037075 46 21.277665075027006 32.11889587761618 27.020563276023058 19.582875771333757 47 20.26395060017655 30.509510169633298 28.431463704189802 20.79507552600035 48 20.58531797672097 29.65486393042497 30.14506405628668 19.614754036567387 49 21.129007534112077 28.69205416289578 29.475405092696466 20.703533210295674 50 20.118416267679784 31.329370328873846 28.332310811650068 20.219902591796302 51 18.778523957342 31.8556488968074 27.515825153459023 21.850001992391576 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2293.0 1 3060.5 2 3828.0 3 36875.0 4 69922.0 5 46168.0 6 22414.0 7 23473.5 8 24533.0 9 28432.5 10 32332.0 11 35239.0 12 38146.0 13 38179.5 14 38213.0 15 35595.0 16 32977.0 17 30110.0 18 27243.0 19 26006.5 20 24770.0 21 22823.5 22 20877.0 23 21206.0 24 21535.0 25 22621.0 26 26286.0 27 28865.0 28 32844.5 29 36824.0 30 44396.0 31 51968.0 32 58678.5 33 65389.0 34 71984.5 35 78580.0 36 84302.5 37 90025.0 38 101074.0 39 112123.0 40 130472.0 41 148821.0 42 170403.5 43 191986.0 44 196749.5 45 201513.0 46 207536.0 47 213559.0 48 213617.0 49 213675.0 50 201748.0 51 189821.0 52 179439.0 53 169057.0 54 155621.0 55 142185.0 56 130901.0 57 119617.0 58 109424.0 59 99231.0 60 88545.5 61 77860.0 62 69698.5 63 61537.0 64 51318.5 65 41100.0 66 33329.5 67 25559.0 68 20869.0 69 16179.0 70 13392.5 71 10606.0 72 8350.5 73 6095.0 74 5422.0 75 3880.0 76 3011.0 77 2227.0 78 1443.0 79 1134.0 80 825.0 81 582.5 82 340.0 83 223.5 84 107.0 85 96.0 86 85.0 87 65.5 88 46.0 89 29.5 90 13.0 91 10.0 92 7.0 93 6.0 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2785597.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.760403577335865 #Duplication Level Percentage of deduplicated Percentage of total 1 80.27929330626358 18.271891145538767 2 7.39057890001676 3.3642511686904886 3 2.669773486834888 1.822953660612997 4 1.4225727624560514 1.2951332076650108 5 0.9864650214291226 1.122617100132605 6 0.7264358481497022 0.9920383846158898 7 0.5444104023661154 0.8673700328686812 8 0.4134515582548089 0.7528259460446272 9 0.31035131690099516 0.6357349101081875 >10 3.184224848179644 16.78049076527382 >50 1.0970541569953023 18.183895410055325 >100 0.9714059492909478 33.30215757052803 >500 0.0030266565751605025 0.4473726885844648 >1k 7.964885724106585E-4 0.29697947096161365 >5k 0.0 0.0 >10k+ 1.5929771448213172E-4 1.8642885383195227 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51419 1.8458879730269668 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2944 0.1056865009547325 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.589894733516729E-5 0.0 0.0 0.04756610521909666 0.0 2 3.589894733516729E-5 0.0 0.0 0.17310472405017668 0.0 3 3.589894733516729E-5 0.0 0.0 0.2524413976608964 0.0 4 3.589894733516729E-5 0.0 0.0 0.3822160922775261 0.0 5 3.589894733516729E-5 0.0 0.0 0.6428065509835055 0.0 6 3.589894733516729E-5 0.0 0.0 0.9864312748757268 0.0 7 3.589894733516729E-5 0.0 0.0 1.1659619104988985 0.0 8 3.589894733516729E-5 0.0 0.0 1.4769544912634527 0.0 9 3.589894733516729E-5 0.0 0.0 1.6054368237760164 0.0 10 3.589894733516729E-5 0.0 0.0 1.8520625919686158 0.0 11 3.589894733516729E-5 0.0 0.0 2.1904101706025676 0.0 12 3.589894733516729E-5 0.0 0.0 2.4220301788090666 0.0 13 3.589894733516729E-5 0.0 0.0 2.53862995975369 0.0 14 3.589894733516729E-5 0.0 0.0 2.592729673387787 0.0 15 3.589894733516729E-5 0.0 0.0 2.6623736312180117 0.0 16 3.589894733516729E-5 0.0 0.0 2.8144415721297804 0.0 17 3.589894733516729E-5 0.0 0.0 2.9899156267040783 0.0 18 3.589894733516729E-5 0.0 0.0 3.1764465570576075 0.0 19 3.589894733516729E-5 0.0 0.0 3.2862973359032193 0.0 20 3.589894733516729E-5 0.0 0.0 3.4007072810603973 0.0 21 3.589894733516729E-5 0.0 0.0 3.5612114745959302 0.0 22 3.589894733516729E-5 0.0 0.0 3.7322699586480024 0.0 23 3.589894733516729E-5 0.0 0.0 3.9274884342566425 0.0 24 3.589894733516729E-5 0.0 0.0 4.07614597517157 0.0 25 3.589894733516729E-5 0.0 0.0 4.212920964518557 0.0 26 3.589894733516729E-5 0.0 0.0 4.332679852828676 0.0 27 3.589894733516729E-5 0.0 0.0 4.462598143234646 0.0 28 3.589894733516729E-5 0.0 0.0 4.590829183115863 0.0 29 3.589894733516729E-5 0.0 0.0 4.732953115615791 0.0 30 3.589894733516729E-5 0.0 0.0 4.897513890200198 0.0 31 7.179789467033458E-5 0.0 0.0 5.041217376382872 0.0 32 7.179789467033458E-5 0.0 0.0 5.179715515201948 0.0 33 7.179789467033458E-5 0.0 0.0 5.3229882140166005 0.0 34 7.179789467033458E-5 0.0 0.0 5.469061030723396 0.0 35 7.179789467033458E-5 0.0 0.0 5.63304742215044 0.0 36 7.179789467033458E-5 0.0 0.0 5.782817830432759 0.0 37 1.0769684200550187E-4 0.0 0.0 5.937865383973346 0.0 38 1.0769684200550187E-4 0.0 0.0 6.103718520661818 0.0 39 1.0769684200550187E-4 0.0 0.0 6.304860322580761 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTCG 20 7.0350175E-4 45.000004 11 CGTTTTT 23130 0.0 43.6965 1 CGTACAA 65 0.0 41.538464 37 TACGCGG 220 0.0 39.886364 2 GCGATAC 170 0.0 39.705883 9 CGCTATC 40 3.460591E-7 39.375004 44 ATAGGGT 1670 0.0 39.341316 4 GGCGATA 1130 0.0 39.225662 8 TCGATAG 75 0.0 39.000004 1 TACGGGA 595 0.0 38.94958 4 GGGCGAT 4420 0.0 38.78959 7 GGTACGC 35 6.251492E-6 38.57143 8 CGTATAG 70 0.0 38.57143 14 GTTTTTT 26865 0.0 38.525963 2 TATTGCG 235 0.0 38.29787 1 TAGGGCG 1165 0.0 38.04721 5 CACGACG 185 0.0 37.7027 26 ATTGGGC 1155 0.0 37.5974 4 TGGGCGA 1450 0.0 37.551723 6 CGCGAAC 30 1.140339E-4 37.500004 44 >>END_MODULE