##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547408_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2956767 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.332613290123977 31.0 31.0 33.0 30.0 34.0 2 31.72977512262549 31.0 31.0 34.0 30.0 34.0 3 31.632000762995528 31.0 31.0 34.0 30.0 34.0 4 35.52185444439822 37.0 35.0 37.0 33.0 37.0 5 35.47444658304155 37.0 35.0 37.0 33.0 37.0 6 35.53384930229538 37.0 35.0 37.0 33.0 37.0 7 35.94844436507848 37.0 35.0 37.0 35.0 37.0 8 35.93998005253711 37.0 35.0 37.0 35.0 37.0 9 37.66302789499477 39.0 37.0 39.0 35.0 39.0 10 37.018425868524645 39.0 37.0 39.0 33.0 39.0 11 36.73618617902594 39.0 37.0 39.0 32.0 39.0 12 36.51313715284295 39.0 35.0 39.0 32.0 39.0 13 36.44054908621477 39.0 35.0 39.0 32.0 39.0 14 37.5867367973195 40.0 36.0 41.0 32.0 41.0 15 37.66159592554976 40.0 36.0 41.0 32.0 41.0 16 37.69394916812857 40.0 36.0 41.0 32.0 41.0 17 37.589203342705055 40.0 36.0 41.0 32.0 41.0 18 37.32662972767215 39.0 36.0 40.0 32.0 41.0 19 37.11595198404203 38.0 36.0 40.0 32.0 41.0 20 36.81615257475479 38.0 35.0 40.0 32.0 41.0 21 36.68714511491775 38.0 35.0 40.0 31.0 41.0 22 36.62763315472609 38.0 35.0 40.0 31.0 41.0 23 36.51677964479447 38.0 35.0 40.0 31.0 41.0 24 36.344671730981844 38.0 35.0 40.0 31.0 41.0 25 36.265116595254206 38.0 35.0 40.0 31.0 41.0 26 36.13086726143791 38.0 35.0 40.0 30.0 41.0 27 36.05498945300729 38.0 35.0 40.0 30.0 41.0 28 36.05429139326839 38.0 35.0 40.0 30.0 41.0 29 36.0236535377999 38.0 35.0 40.0 30.0 41.0 30 35.900845078425185 38.0 35.0 40.0 30.0 41.0 31 35.71225734053444 38.0 35.0 40.0 29.0 41.0 32 35.3981243703004 38.0 34.0 40.0 27.0 41.0 33 34.89599789229249 38.0 34.0 40.0 24.0 41.0 34 34.297322379477315 38.0 33.0 40.0 21.0 41.0 35 33.85395568876411 38.0 33.0 40.0 18.0 41.0 36 33.573103663562264 37.0 33.0 40.0 16.0 41.0 37 33.43698235268454 37.0 33.0 40.0 15.0 41.0 38 33.323300415622874 37.0 32.0 40.0 15.0 41.0 39 33.26144163540786 37.0 32.0 40.0 15.0 41.0 40 33.129552988111676 37.0 32.0 40.0 15.0 41.0 41 33.02142678134598 37.0 32.0 40.0 14.0 41.0 42 32.9369104836465 37.0 32.0 40.0 13.0 41.0 43 32.87007633675565 37.0 32.0 40.0 12.0 41.0 44 32.72984716076715 36.0 31.0 40.0 12.0 41.0 45 32.64089459872895 36.0 31.0 40.0 11.0 41.0 46 32.5515027054888 36.0 31.0 40.0 11.0 41.0 47 32.41679645369419 36.0 31.0 40.0 10.0 41.0 48 32.37151523944903 35.0 31.0 40.0 10.0 41.0 49 32.23410806465305 35.0 31.0 40.0 10.0 41.0 50 32.179129096070135 35.0 31.0 40.0 10.0 41.0 51 31.771770315347812 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 3.0 12 3.0 13 16.0 14 39.0 15 126.0 16 388.0 17 903.0 18 2211.0 19 4175.0 20 7014.0 21 11071.0 22 16852.0 23 24616.0 24 37443.0 25 58380.0 26 85552.0 27 96512.0 28 90276.0 29 85201.0 30 87026.0 31 96669.0 32 112220.0 33 138314.0 34 199004.0 35 251526.0 36 244952.0 37 287023.0 38 404328.0 39 614749.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.570033756464408 22.178548394242767 24.914239099665274 23.337178749627547 2 39.10017258715347 23.247418548705394 25.73418872707927 11.918220137061866 3 25.72153977638414 23.457884912811867 38.89904074281132 11.921534567992676 4 22.19082531697628 25.50231384481767 38.893798530624835 13.41306230758122 5 20.393862620896407 29.66987253307413 37.45678979777575 12.479475048253716 6 19.837477893929417 37.02760481295956 33.90162295507221 9.23329433803881 7 80.63824440681326 2.4581240253290164 15.628996129894576 1.2746354379631537 8 81.058737465617 2.14037832538039 15.650810496735115 1.1500737122674867 9 76.63776009404867 4.74217278534291 16.643414919065318 1.9766522015431043 10 34.61317716275919 32.975510075700925 22.793037124670292 9.618275636869594 11 25.27402395927714 24.540959771263683 34.153722630156516 16.031293639302657 12 24.683345018393403 21.365532015204444 35.84976428646559 18.101358679936567 13 22.008700719400615 23.949435312285345 36.125707571817465 17.91615639649658 14 18.62399032456734 25.358203740774975 37.072721658487126 18.945084276170558 15 18.15391608469656 25.30405676199714 39.47307988759344 17.068947265712854 16 21.99540917495359 24.023840904609663 37.63235317493736 16.34839674549939 17 20.81371308594827 24.750039485695016 35.63165443878398 18.804592989572733 18 21.209550837113646 24.509675601763682 36.96534086047362 17.31543270064905 19 22.429396702547074 26.542267280445163 33.75524686253601 17.27308915447176 20 23.40759349654538 26.11331904069546 35.04750289759051 15.431584565168647 21 23.12380380327567 25.629310662625766 35.84303396243262 15.403851571665944 22 23.26645961619566 22.91797087832758 35.525998497683446 18.28957100779331 23 20.360143359283974 25.907486115747368 35.732541657831 17.999828867137655 24 19.61821814163916 25.664010725227925 37.69928438730546 17.018486745827452 25 19.99142982859319 27.0505927589154 35.0984030868851 17.85957432560631 26 19.589369064251596 27.611712387212112 34.217982005345704 18.580936543190585 27 18.268399234704663 27.277394532609435 35.67250987311479 18.78169635957111 28 17.795720799102533 27.32538613965862 36.534667763810944 18.3442252974279 29 19.12118878491271 25.721877983621976 36.372700317610416 18.784232913854897 30 19.473634547463497 26.025791007543038 36.44994685073257 18.05062759426089 31 21.07633100612933 26.24092463153167 34.40944112268569 18.27330323965331 32 21.737154128140634 25.67111307722252 34.30513801053651 18.286594784100338 33 21.285512182732017 26.79757992428893 33.24387751892523 18.673030374053823 34 19.793815339524556 27.77699426434345 34.05648804927815 18.372702346853846 35 20.296458936399116 28.824286797032027 32.51717162698312 18.362082639585736 36 21.506327688316325 29.92055173775952 29.976660318516814 18.59646025540734 37 20.613020911015308 30.04765001773897 30.5505641804038 18.78876489084192 38 21.13500996189419 29.973785556995193 30.24529832753139 18.64590615357923 39 20.737819381777463 29.5794359176763 29.92521899764168 19.75752570290456 40 22.438156270007074 28.34721166733801 30.059825478301132 19.15480658435379 41 19.754549479211587 28.748257809966088 30.690480514697306 20.806712196125023 42 20.650561914415306 28.456790812397458 29.89643756170168 20.99620971148555 43 20.30082180976722 28.90745195681635 29.94615402566384 20.84557220775259 44 20.26906415013425 28.9980576758331 29.904486893962222 20.82839128007043 45 20.17264126662669 29.459270886072524 29.190125566201193 21.177962281099592 46 20.379252068221813 29.817770558180605 29.363896445002265 20.43908092859532 47 19.76801012727753 29.41547304877253 30.987189724452417 19.829327099497526 48 20.326593201290464 28.614429205953666 31.123385779129702 19.935591813626168 49 20.64444036341044 28.493317194083943 30.685238302510815 20.177004139994796 50 19.852494295289418 28.747378471147712 31.313052398109154 20.087074835453723 51 19.117028835887307 28.905388892665535 30.86976417147513 21.107818099972032 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2193.0 1 3098.5 2 4004.0 3 57766.5 4 111529.0 5 76193.0 6 40857.0 7 40394.0 8 39931.0 9 41568.5 10 43206.0 11 43930.0 12 44654.0 13 43730.0 14 42806.0 15 40994.0 16 39182.0 17 36451.0 18 33720.0 19 31686.0 20 29652.0 21 28988.5 22 28325.0 23 27685.5 24 27046.0 25 28850.0 26 34377.5 27 38101.0 28 42308.5 29 46516.0 30 54140.0 31 61764.0 32 69456.5 33 77149.0 34 86114.5 35 95080.0 36 101251.0 37 107422.0 38 114843.5 39 122265.0 40 131716.0 41 141167.0 42 149958.5 43 158750.0 44 165796.0 45 172842.0 46 178609.0 47 184376.0 48 183082.0 49 181788.0 50 179405.0 51 177022.0 52 166767.5 53 156513.0 54 149367.5 55 142222.0 56 134476.0 57 126730.0 58 119450.0 59 112170.0 60 103566.5 61 94963.0 62 86262.5 63 77562.0 64 68075.0 65 58588.0 66 48788.5 67 38989.0 68 32128.0 69 25267.0 70 20599.0 71 15931.0 72 13087.0 73 10243.0 74 8715.5 75 5702.5 76 4217.0 77 3307.0 78 2397.0 79 1670.0 80 943.0 81 668.5 82 394.0 83 320.5 84 247.0 85 184.5 86 122.0 87 80.0 88 38.0 89 26.0 90 14.0 91 12.0 92 10.0 93 9.5 94 9.0 95 8.0 96 7.0 97 4.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2956767.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.363320735650902 #Duplication Level Percentage of deduplicated Percentage of total 1 78.36158301856881 21.44233129490433 2 6.565239807702991 3.5929352512928006 3 2.812061961946711 2.308420601798148 4 1.7466949705211596 1.9118149882287514 5 1.2110232155314709 1.6568808332453464 6 0.8773358241400724 1.4404092929292849 7 0.65948930691508 1.2632072198794617 8 0.55812172597078 1.221765103781881 9 0.4413147810643601 1.0868254109682878 >10 5.517521813741677 35.87592183610066 >50 1.146212798174099 20.95191735840958 >100 0.10001149361367684 3.8243600466561523 >500 0.0022595214060531356 0.4187130161188671 >1k 0.0010042317360236125 0.47583522660333477 >5k 0.0 0.0 >10k+ 1.2552896700295156E-4 2.5286625190830647 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 73617 2.489780222790636 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 3548 0.11999592798485642 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.382072378378141E-5 0.0 0.0 0.026075778037295466 0.0 2 3.382072378378141E-5 0.0 0.0 0.06625479789242777 0.0 3 3.382072378378141E-5 0.0 0.0 0.10690730788053303 0.0 4 3.382072378378141E-5 0.0 0.0 0.15401957611134054 0.0 5 3.382072378378141E-5 0.0 0.0 0.2877128972286284 0.0 6 3.382072378378141E-5 0.0 0.0 0.5767786234086081 0.0 7 3.382072378378141E-5 0.0 0.0 0.7526463870842715 0.0 8 3.382072378378141E-5 0.0 0.0 1.0193566148431716 0.0 9 3.382072378378141E-5 0.0 3.382072378378141E-5 1.2033751729507263 0.0 10 3.382072378378141E-5 0.0 3.382072378378141E-5 1.4188808249009814 0.0 11 6.764144756756282E-5 0.0 3.382072378378141E-5 1.6177805014734 0.0 12 6.764144756756282E-5 0.0 3.382072378378141E-5 1.7659152716463624 0.0 13 6.764144756756282E-5 0.0 3.382072378378141E-5 1.8686626305014904 0.0 14 6.764144756756282E-5 0.0 3.382072378378141E-5 1.9344777589847288 0.0 15 6.764144756756282E-5 0.0 3.382072378378141E-5 1.9901466703328332 0.0 16 6.764144756756282E-5 0.0 3.382072378378141E-5 2.05934387119445 0.0 17 6.764144756756282E-5 0.0 3.382072378378141E-5 2.1389578549814714 0.0 18 6.764144756756282E-5 0.0 3.382072378378141E-5 2.2340617302614647 0.0 19 6.764144756756282E-5 0.0 3.382072378378141E-5 2.3019399228955137 0.0 20 1.0146217135134422E-4 0.0 3.382072378378141E-5 2.3756691007441573 0.0 21 1.0146217135134422E-4 0.0 3.382072378378141E-5 2.4632309546203675 0.0 22 1.0146217135134422E-4 0.0 3.382072378378141E-5 2.5633064762965767 0.0 23 1.0146217135134422E-4 0.0 3.382072378378141E-5 2.68255834835819 0.0 24 1.0146217135134422E-4 0.0 3.382072378378141E-5 2.773468453888994 0.0 25 1.0146217135134422E-4 0.0 3.382072378378141E-5 2.8647505873814203 0.0 26 1.0146217135134422E-4 0.0 3.382072378378141E-5 2.950012632040333 0.0 27 1.0146217135134422E-4 0.0 3.382072378378141E-5 3.0405168888857323 0.0 28 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.1360604335749147 0.0 29 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.2447602398159883 0.0 30 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.3719261612430063 0.0 31 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.4856652553278633 0.0 32 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.6108357540516383 0.0 33 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.7310007856554135 0.0 34 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.847411716919189 0.0 35 1.3528289513512563E-4 0.0 3.382072378378141E-5 3.975998108745126 0.0 36 1.3528289513512563E-4 0.0 3.382072378378141E-5 4.098090921604577 0.0 37 1.3528289513512563E-4 0.0 3.382072378378141E-5 4.227387548629973 0.0 38 1.3528289513512563E-4 0.0 3.382072378378141E-5 4.37636783689753 0.0 39 1.3528289513512563E-4 0.0 3.382072378378141E-5 4.578581944400759 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 39300 0.0 43.935112 1 TACGGGA 1185 0.0 40.06329 4 GACCGAT 1500 0.0 39.3 9 GTTTTTT 45165 0.0 38.643307 2 TAGGGAC 3150 0.0 38.57143 5 TAGCACG 100 0.0 38.25 1 CGAGGGA 1940 0.0 38.041237 4 CGGGTAT 350 0.0 37.92857 6 TAGGGAT 4660 0.0 37.90236 5 TAAGGGA 4115 0.0 37.727825 4 TACGGGT 335 0.0 37.611942 4 CGTAAGG 370 0.0 37.094597 2 CACGACC 850 0.0 37.058826 27 ATAGGGA 4550 0.0 36.93956 4 ATAACGC 110 0.0 36.81818 11 TTACGGG 735 0.0 36.734695 3 GGACCGA 1735 0.0 36.700287 8 GTAGGGA 3980 0.0 36.576633 4 TATGGGA 3390 0.0 36.504425 4 GCGTAAG 185 0.0 36.48649 1 >>END_MODULE