##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547405_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3016436 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.255887079984458 31.0 31.0 33.0 30.0 34.0 2 31.64234646450314 31.0 31.0 34.0 30.0 34.0 3 31.58916018771822 31.0 31.0 34.0 30.0 34.0 4 35.45104023423669 37.0 35.0 37.0 33.0 37.0 5 35.38599492911502 37.0 35.0 37.0 33.0 37.0 6 35.433414798126 37.0 35.0 37.0 33.0 37.0 7 35.88784081611544 37.0 35.0 37.0 35.0 37.0 8 35.897298997890225 37.0 35.0 37.0 35.0 37.0 9 37.64950590697101 39.0 37.0 39.0 35.0 39.0 10 36.8936383864932 39.0 37.0 39.0 32.0 39.0 11 36.59559261326943 39.0 35.0 39.0 32.0 39.0 12 36.207071192626 38.0 35.0 39.0 32.0 39.0 13 36.02414902885392 38.0 35.0 39.0 31.0 39.0 14 37.109231225194236 39.0 35.0 41.0 31.0 41.0 15 37.270570965205295 39.0 35.0 41.0 32.0 41.0 16 37.37271700775352 39.0 35.0 41.0 32.0 41.0 17 37.292461699833844 39.0 35.0 41.0 32.0 41.0 18 37.05694037599339 39.0 35.0 40.0 32.0 41.0 19 36.85596379303257 38.0 35.0 40.0 31.0 41.0 20 36.585924912711555 38.0 35.0 40.0 31.0 41.0 21 36.45440977365341 38.0 35.0 40.0 31.0 41.0 22 36.361875405279605 38.0 35.0 40.0 31.0 41.0 23 36.28605049137459 38.0 35.0 40.0 31.0 41.0 24 36.13429225748532 38.0 35.0 40.0 30.0 41.0 25 36.014039084535526 37.0 35.0 40.0 30.0 41.0 26 35.770214252846735 37.0 34.0 40.0 30.0 41.0 27 35.69905113186555 37.0 34.0 40.0 30.0 41.0 28 35.66526423898932 37.0 34.0 40.0 30.0 41.0 29 35.61208326647739 37.0 34.0 40.0 29.0 41.0 30 35.5365050012664 37.0 34.0 40.0 29.0 41.0 31 35.3859551470676 37.0 34.0 40.0 28.0 41.0 32 35.08261604091716 37.0 34.0 40.0 26.0 41.0 33 34.70217733775886 37.0 33.0 40.0 24.0 41.0 34 34.281473898335655 37.0 33.0 40.0 22.0 41.0 35 33.97371069699473 36.0 33.0 40.0 21.0 41.0 36 33.6655781856469 36.0 33.0 40.0 18.0 41.0 37 33.59104287311251 36.0 33.0 40.0 18.0 41.0 38 33.48623408552344 36.0 33.0 40.0 18.0 41.0 39 33.331527670403084 36.0 33.0 40.0 18.0 41.0 40 33.19604758728513 36.0 32.0 40.0 18.0 41.0 41 33.15358721351953 36.0 32.0 40.0 17.0 41.0 42 33.05827174851381 35.0 32.0 40.0 17.0 41.0 43 32.93657249814019 35.0 32.0 40.0 16.0 41.0 44 32.82679891103275 35.0 32.0 40.0 15.0 41.0 45 32.697733020027606 35.0 31.0 40.0 15.0 41.0 46 32.61129889710904 35.0 31.0 40.0 15.0 41.0 47 32.58038857777854 35.0 31.0 40.0 15.0 41.0 48 32.44578900397688 35.0 31.0 39.0 15.0 41.0 49 32.31844434955689 35.0 31.0 39.0 15.0 41.0 50 32.18307698223997 35.0 31.0 39.0 14.0 41.0 51 31.78658224474181 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 5.0 13 11.0 14 45.0 15 144.0 16 429.0 17 1075.0 18 2426.0 19 4485.0 20 7768.0 21 11985.0 22 17696.0 23 25641.0 24 37654.0 25 55430.0 26 78167.0 27 88523.0 28 87189.0 29 87545.0 30 93309.0 31 106287.0 32 125799.0 33 155844.0 34 233076.0 35 312341.0 36 272991.0 37 284482.0 38 374410.0 39 551503.0 40 174.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.844106090764065 22.540541221494507 26.859943323843105 21.755409363898323 2 37.10100264020188 23.723891373793442 26.872441517075117 12.302664468929558 3 25.81914550814272 23.588532957437188 38.0702590739535 12.522062460466591 4 22.288555102776918 26.502567931161146 37.77454585477697 13.434331111284973 5 20.64850704606363 29.96741850316068 36.55787823776138 12.826196213014299 6 20.19916882042251 37.46441164340964 33.120510430189796 9.21590910597805 7 82.1714102337991 2.5411445825470853 14.02575754963805 1.2616876340157723 8 82.64471714301249 2.0430070454005986 13.864573954163125 1.447701857423794 9 78.53718759489676 4.137995966100391 15.138428264349052 2.1863881746537968 10 38.60754877610531 26.589226491130592 22.64463757891764 12.15858715384646 11 29.944676432717287 24.189838604233604 30.27921029983729 15.586274663211816 12 28.60226439413931 21.438313294232 32.55434559195024 17.405076719678455 13 21.469641656577497 27.614774521985545 33.69761533147065 17.217968489966303 14 18.26294342064609 29.24905418182252 34.23964572760701 18.248356669924373 15 17.242202387188062 26.139556748427616 39.976880000106085 16.64136086427824 16 20.078861278674566 24.770126069308283 38.48909772990376 16.661914922113382 17 20.366651240072724 25.676195351069936 32.649789354058896 21.307364054798445 18 20.89992958577606 26.331074155062467 35.20416146737408 17.564834791787394 19 22.371401216535013 28.37003669230841 31.15968646442358 18.098875626733005 20 23.97843017388733 27.58616459954728 31.889753338045296 16.545651888520094 21 21.54867532412423 28.46445275152531 33.4010070162271 16.585864908123362 22 21.677801219717573 26.12947862974716 33.10257535714333 19.090144793391936 23 19.791237075807345 28.40255851607659 32.60622801213087 19.199976395985196 24 19.827670800905437 27.17949261976717 36.21462547191454 16.778211107412854 25 19.365668623501378 28.267995740668788 33.899078249961214 18.46725738586862 26 18.31098024290918 30.89500324223686 32.01529884937058 18.77871766548337 27 18.273817180275 30.550059739374547 33.17706724094262 17.99905583940783 28 17.38694273639487 29.41617193270469 35.15652246558522 18.040362865315227 29 17.96984918625822 27.578838072480238 35.065952004285855 19.38536073697569 30 18.58093458637942 29.22047741109044 34.08194306128159 18.11664494124855 31 21.017584991029146 28.405177500865257 32.25442210608811 18.322815402017483 32 22.355554700978242 27.65296528751149 31.933811955566107 18.057668055944166 33 21.44428060134543 28.60156820830941 31.296271493908705 18.657879696436456 34 18.417165157822012 29.421078385220174 32.25127269400047 19.910483762957345 35 18.802785804174196 30.06587907053224 31.669791767503106 19.461543357790454 36 22.37070503070511 29.754451942623678 29.103849708729108 18.7709933179421 37 19.682035355631612 32.06373349210791 29.886263126418065 18.36796802584242 38 19.978908884524653 31.841318695307976 28.72817457423264 19.45159784593474 39 19.929711752545057 31.996568135375654 28.711731327964525 19.361988784114764 40 21.90087905064122 30.203193437553455 28.273532075601803 19.62239543620352 41 18.525670692167843 29.20864225198214 29.87923496470669 22.386452091143322 42 19.699440001379113 29.758430147365967 28.75738122738225 21.784748623872677 43 19.688798303693495 29.88921362826859 29.539860948483575 20.882127119554337 44 19.259881529062774 30.703187470246345 29.230887046832756 20.80604395385813 45 18.451278263487108 32.35384407293906 28.025656768451245 21.16922089512259 46 19.894073668395418 32.00979566614375 27.96890104746131 20.12722961799952 47 19.005508487499817 30.369217182131496 29.92528268459865 20.69999164577004 48 19.960575991003953 29.298549679157787 30.60038402936446 20.140490300473804 49 19.63731370398709 29.181258942672745 30.398258076750178 20.783169276589987 50 18.48326965995632 31.09172546674287 30.430779900518363 19.994224972782447 51 18.057469145707053 31.787380869343824 28.64648877019105 21.508661214758078 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1690.0 1 2857.5 2 4025.0 3 62184.0 4 120343.0 5 76857.5 6 33372.0 7 34158.0 8 34944.0 9 39896.0 10 44848.0 11 49768.0 12 54688.0 13 55258.0 14 55828.0 15 52018.0 16 48208.0 17 42996.5 18 37785.0 19 34915.5 20 32046.0 21 29376.0 22 26706.0 23 26454.5 24 26203.0 25 27398.0 26 30700.5 27 32808.0 28 36956.5 29 41105.0 30 46826.0 31 52547.0 32 58753.5 33 64960.0 34 73520.5 35 82081.0 36 86633.5 37 91186.0 38 98785.0 39 106384.0 40 123336.0 41 140288.0 42 160117.0 43 179946.0 44 188172.0 45 196398.0 46 202392.0 47 208386.0 48 205739.5 49 203093.0 50 193039.0 51 182985.0 52 176031.0 53 169077.0 54 156336.5 55 143596.0 56 134423.5 57 125251.0 58 117040.0 59 108829.0 60 101905.5 61 94982.0 62 84709.5 63 74437.0 64 65584.5 65 56732.0 66 47883.0 67 39034.0 68 32772.5 69 26511.0 70 21925.0 71 17339.0 72 14586.0 73 11833.0 74 9883.0 75 6542.5 76 5152.0 77 3614.5 78 2077.0 79 1594.0 80 1111.0 81 906.0 82 701.0 83 463.5 84 226.0 85 167.0 86 108.0 87 72.0 88 36.0 89 28.0 90 20.0 91 12.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3016436.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.005629013298474 #Duplication Level Percentage of deduplicated Percentage of total 1 78.68191572978164 20.461727105243153 2 7.076454607802962 3.680553065199408 3 2.9052569616478046 2.266591041987466 4 1.736915748504861 1.8067834633189217 5 1.1760249008153107 1.5291633640502054 6 0.8499505317784132 1.32620989254511 7 0.604430121417306 1.1003009851428989 8 0.46394397559678296 0.965212392985979 9 0.3792009674923373 0.8875223713880621 >10 4.503865888416926 28.178979329824756 >50 1.328763744493229 24.025514742406152 >100 0.2899134345237119 9.728313187891834 >500 0.001811054930890736 0.34798414910569175 >1k 0.0014229717314141498 0.6131774058149114 >5k 0.0 0.0 >10k+ 1.2936106649219544E-4 3.0819675030954894 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 91613 3.037127258791501 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.630341237142111E-5 0.0 0.0 0.05794918241262205 0.0 2 6.630341237142111E-5 0.0 0.0 0.14944789148518317 0.0 3 6.630341237142111E-5 0.0 0.0 0.22241479679993212 0.0 4 6.630341237142111E-5 0.0 0.0 0.3360588456045479 0.0 5 6.630341237142111E-5 0.0 0.0 0.6092289045748028 0.0 6 6.630341237142111E-5 0.0 0.0 1.128417775149216 0.0 7 6.630341237142111E-5 0.0 0.0 1.4837709137538473 0.0 8 6.630341237142111E-5 0.0 0.0 1.9312194921423826 0.0 9 6.630341237142111E-5 0.0 0.0 2.1842333137517254 0.0 10 6.630341237142111E-5 0.0 0.0 2.459060958031266 0.0 11 6.630341237142111E-5 0.0 0.0 2.7595480228985463 0.0 12 6.630341237142111E-5 0.0 0.0 2.9569995849406387 0.0 13 6.630341237142111E-5 0.0 0.0 3.0903357472195663 0.0 14 6.630341237142111E-5 0.0 0.0 3.1724856751477573 0.0 15 6.630341237142111E-5 0.0 0.0 3.2411760103645495 0.0 16 6.630341237142111E-5 0.0 0.0 3.340631128921681 0.0 17 6.630341237142111E-5 0.0 0.0 3.454474087963411 0.0 18 6.630341237142111E-5 0.0 0.0 3.588738498015539 0.0 19 6.630341237142111E-5 0.0 0.0 3.6842817152427565 0.0 20 6.630341237142111E-5 0.0 0.0 3.7774380096246034 0.0 21 6.630341237142111E-5 0.0 0.0 3.9014916941715323 0.0 22 6.630341237142111E-5 0.0 0.0 4.031380079007146 0.0 23 6.630341237142111E-5 0.0 0.0 4.181988280208829 0.0 24 6.630341237142111E-5 0.0 0.0 4.300605084941302 0.0 25 6.630341237142111E-5 0.0 0.0 4.410105170472703 0.0 26 6.630341237142111E-5 0.0 0.0 4.514367286426763 0.0 27 6.630341237142111E-5 0.0 0.0 4.632652574097379 0.0 28 6.630341237142111E-5 0.0 0.0 4.74795420821128 0.0 29 6.630341237142111E-5 0.0 0.0 4.874726332665437 0.0 30 6.630341237142111E-5 0.0 0.0 5.042507117671318 0.0 31 9.945511855713166E-5 0.0 0.0 5.178959540331703 0.0 32 9.945511855713166E-5 0.0 0.0 5.306958277914731 0.0 33 9.945511855713166E-5 0.0 0.0 5.441189536260673 0.0 34 9.945511855713166E-5 0.0 0.0 5.574525698539601 0.0 35 9.945511855713166E-5 0.0 0.0 5.718172041442285 0.0 36 9.945511855713166E-5 0.0 0.0 5.860724378040841 0.0 37 9.945511855713166E-5 0.0 0.0 6.009774449051795 0.0 38 9.945511855713166E-5 0.0 0.0 6.171985747418477 0.0 39 9.945511855713166E-5 0.0 0.0 6.413263865038078 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 35620 0.0 43.888264 1 TACGGGA 895 0.0 39.972065 4 GTTTTTT 40185 0.0 39.3785 2 TATGGGC 1375 0.0 39.272728 4 AGGGCGA 2410 0.0 38.838173 6 TAGGGCG 900 0.0 38.500004 5 GGGCGAT 4535 0.0 38.450935 7 GCGATAT 240 0.0 38.437504 9 TTAACGG 290 0.0 38.017242 2 TAAGGGA 3190 0.0 37.876175 4 GGCGATA 1130 0.0 37.433628 8 TAGGGAC 2410 0.0 37.3444 5 TCGTCCC 965 0.0 37.07254 38 TAGGGCA 1845 0.0 36.463417 5 AGGGATT 3065 0.0 36.411095 6 ATAGGGC 1655 0.0 36.02719 4 ACGGGAT 875 0.0 36.0 5 TAAGGGT 1295 0.0 35.965252 4 GGCGATT 1145 0.0 35.960697 8 ATAGGGA 3250 0.0 35.930767 4 >>END_MODULE