##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547403_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2397615 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.280617613753666 31.0 31.0 33.0 30.0 34.0 2 31.680414078156836 31.0 31.0 34.0 30.0 34.0 3 31.797718149077312 31.0 31.0 34.0 30.0 34.0 4 35.57885023241847 37.0 35.0 37.0 33.0 37.0 5 35.465335343664435 37.0 35.0 37.0 33.0 37.0 6 35.4937560867779 37.0 35.0 37.0 33.0 37.0 7 35.89254488314429 37.0 35.0 37.0 35.0 37.0 8 35.88312218600568 37.0 35.0 37.0 35.0 37.0 9 37.62393461836033 39.0 37.0 39.0 35.0 39.0 10 36.91489250776292 39.0 37.0 39.0 32.0 39.0 11 36.573110361755326 39.0 35.0 39.0 32.0 39.0 12 35.97200217716355 37.0 35.0 39.0 31.0 39.0 13 35.67859727270642 38.0 35.0 39.0 30.0 39.0 14 36.671374261505704 39.0 35.0 41.0 31.0 41.0 15 36.903162934833155 39.0 35.0 41.0 31.0 41.0 16 37.03435956148089 39.0 35.0 41.0 32.0 41.0 17 36.950138783749686 38.0 35.0 41.0 31.0 41.0 18 36.827109022924866 38.0 35.0 40.0 31.0 41.0 19 36.77642365433984 38.0 35.0 40.0 31.0 41.0 20 36.64306237657005 38.0 35.0 40.0 31.0 41.0 21 36.49724246803594 38.0 35.0 40.0 31.0 41.0 22 36.40223054994234 38.0 35.0 40.0 30.0 41.0 23 36.326132010351955 38.0 35.0 40.0 30.0 41.0 24 36.20966085047016 38.0 35.0 40.0 30.0 41.0 25 36.09943130986418 38.0 35.0 40.0 30.0 41.0 26 35.857205180981936 38.0 34.0 40.0 30.0 41.0 27 35.85066659993368 38.0 34.0 40.0 30.0 41.0 28 35.90644327800752 38.0 34.0 40.0 30.0 41.0 29 35.94336121520761 38.0 35.0 40.0 30.0 41.0 30 35.93871493129631 38.0 35.0 40.0 30.0 41.0 31 35.845605320287035 38.0 34.0 40.0 30.0 41.0 32 35.69378277997093 38.0 34.0 40.0 29.0 41.0 33 35.53281198190702 38.0 34.0 40.0 28.0 41.0 34 35.33630336813876 38.0 34.0 40.0 27.0 41.0 35 35.20446151696582 38.0 34.0 40.0 27.0 41.0 36 34.977573964126854 37.0 34.0 40.0 25.0 41.0 37 34.930685702249946 37.0 34.0 40.0 25.0 41.0 38 34.84730534301796 37.0 34.0 40.0 25.0 41.0 39 34.7128755033648 37.0 33.0 40.0 24.0 41.0 40 34.58355741017636 37.0 33.0 40.0 24.0 41.0 41 34.567583619555265 37.0 33.0 40.0 24.0 41.0 42 34.48144551981866 36.0 33.0 40.0 24.0 41.0 43 34.36756109717365 36.0 33.0 40.0 24.0 41.0 44 34.26796128652849 36.0 33.0 40.0 23.0 41.0 45 34.11332887056513 36.0 33.0 40.0 23.0 41.0 46 34.041444518823916 36.0 33.0 40.0 23.0 41.0 47 34.00338836718989 35.0 33.0 40.0 23.0 41.0 48 33.8854490816916 35.0 33.0 40.0 23.0 41.0 49 33.75408729091201 35.0 33.0 40.0 23.0 41.0 50 33.615212200457535 35.0 33.0 39.0 23.0 41.0 51 33.14081910565291 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 3.0 12 4.0 13 13.0 14 35.0 15 118.0 16 311.0 17 678.0 18 1449.0 19 2683.0 20 4676.0 21 7192.0 22 10660.0 23 15124.0 24 21053.0 25 28714.0 26 38904.0 27 46847.0 28 53175.0 29 60293.0 30 70835.0 31 83804.0 32 103120.0 33 131489.0 34 208346.0 35 268607.0 36 191311.0 37 237477.0 38 328676.0 39 481885.0 40 129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.99061775973207 23.90750808616062 28.95940340713584 14.142470746971469 2 31.092398070582643 25.534458201170747 30.024461808922613 13.348681919323996 3 29.221664028628446 25.60340171378641 31.37855744145745 13.796376816127692 4 25.88209533223641 28.671534003582728 30.69587902978585 14.750491634395013 5 23.385030540766554 32.72431145117127 29.61693182600209 14.27372618206009 6 23.17469652133474 41.44155754781314 25.847269056958687 9.536476873893433 7 90.39754088959236 2.66348016674904 5.9613407490360215 0.9776381946225728 8 90.57271496883361 2.2231676061419368 5.8624925186070325 1.341624906417419 9 85.5900968253869 4.809612886138933 7.348844580969005 2.2514457075051664 10 45.62700850636987 31.090521205447914 12.997833263472241 10.284637024709973 11 37.725865078421684 23.342738513064024 23.414768426123462 15.516627982390835 12 35.228716870723616 20.559806307518098 26.529905760516183 17.68157106124211 13 26.030117429195265 28.386292211218233 27.818102572765017 17.765487786821488 14 20.84137778584135 29.497896868346253 29.536768830692168 20.123956515120234 15 19.695447350804862 24.008066349267917 38.18949247481351 18.106993825113708 16 24.142992098397784 22.46782740348221 35.4842207777312 17.904959720388803 17 24.39165587469214 22.588572393816357 27.736688334031946 25.28308339745956 18 24.559948115106053 23.433203412557894 31.226281116859877 20.78056735547617 19 27.886211923098582 24.938240710038933 26.47309930910509 20.702448057757397 20 29.246730605205588 25.453627876035146 26.776317298648866 18.5233242201104 21 27.0560953280656 25.88330486754546 28.43288017467358 18.627719629715365 22 26.5539713423548 23.615301038740583 28.016716612133308 21.81401100677131 23 24.49692715469331 26.16913057350742 27.795163110007238 21.538779161792032 24 24.16943504274039 23.07793369661101 32.94861768882827 19.80401357182033 25 23.438959132304394 25.122590574383292 30.407008631494215 21.0314416618181 26 21.800831242714114 29.00119493746911 27.216504734913656 21.98146908490312 27 21.704777455930163 28.274097384275628 28.815969202728546 21.205155957065667 28 20.2127113819358 27.123787597258108 32.23211399661747 20.43138702418862 29 21.559341262045827 24.75585112705751 31.779872915376323 21.90493469552034 30 22.808540987606435 26.26743659845305 30.297900204995383 20.626122208945137 31 26.43485296847075 25.328503533719964 27.586539123253733 20.650104374555546 32 27.911987537615506 25.436152176225125 26.869952014814725 19.781908271344648 33 26.58003891367046 26.192445409292155 26.743242764163554 20.484272912873834 34 22.335988054796122 26.465842097250807 29.06096266498166 22.137207182971412 35 22.622355966241454 26.608984344859373 29.37619259138769 21.392467097511485 36 26.808140589711027 26.860525981026978 25.752716762282517 20.578616666979478 37 23.30699465927599 29.235302581940804 27.28457237713311 20.173130381650097 38 23.728330027965292 29.019588215789437 25.59335005828709 21.65873169795818 39 23.16410266035206 28.42670737378603 27.048963240553636 21.360226725308276 40 25.27132170928193 25.534124536257906 26.38868208615645 22.80587166830371 41 20.814184095444848 25.205923386365196 28.182256117016287 25.79763640117367 42 22.5460718255433 26.154407609228336 26.567401355096624 24.732119210131735 43 22.24719147986645 25.94415700602474 27.695063636155098 24.113587877953716 44 21.80633671377598 26.691900075700225 28.001284609914435 23.500478600609355 45 21.326609985339598 29.049534641716875 26.25229655303291 23.37155881991062 46 22.91931773866947 28.39354942307251 26.46196324263904 22.22516959561898 47 21.83277965811859 27.12057607247202 28.258081468459284 22.78856280095011 48 23.04473403778338 25.203170650834267 29.726373917413763 22.02572139396859 49 23.041731053567815 24.589352335550117 30.096783678780785 22.272132932101275 50 22.03564792512559 28.009375984050816 28.024390905128637 21.93058518569495 51 20.96345743582685 28.685130848780975 26.93547546207377 23.4159362533184 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1215.0 1 2509.5 2 3804.0 3 15262.5 4 26721.0 5 18202.5 6 9684.0 7 9785.0 8 9886.0 9 10426.5 10 10967.0 11 11156.5 12 11346.0 13 11281.5 14 11217.0 15 10848.0 16 10479.0 17 10080.0 18 9681.0 19 10061.5 20 10442.0 21 10014.0 22 9586.0 23 10761.5 24 11937.0 25 14451.0 26 20180.0 27 23395.0 28 25853.0 29 28311.0 30 33514.0 31 38717.0 32 43178.5 33 47640.0 34 55724.5 35 63809.0 36 69280.5 37 74752.0 38 83390.5 39 92029.0 40 108253.0 41 124477.0 42 141765.5 43 159054.0 44 163236.0 45 167418.0 46 168311.0 47 169204.0 48 165524.0 49 161844.0 50 161090.5 51 160337.0 52 152640.5 53 144944.0 54 138147.0 55 131350.0 56 127262.0 57 123174.0 58 121487.0 59 119800.0 60 115371.5 61 110943.0 62 99340.5 63 87738.0 64 77849.0 65 67960.0 66 57787.5 67 47615.0 68 41138.0 69 34661.0 70 29400.5 71 24140.0 72 20208.5 73 16277.0 74 13654.5 75 8882.0 76 6732.0 77 5116.5 78 3501.0 79 2425.5 80 1350.0 81 1055.5 82 761.0 83 523.5 84 286.0 85 271.0 86 256.0 87 181.5 88 107.0 89 74.0 90 41.0 91 30.0 92 19.0 93 13.5 94 8.0 95 5.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2397615.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.176021518201622 #Duplication Level Percentage of deduplicated Percentage of total 1 81.38087336687066 16.419422522200236 2 5.61978994537822 2.267700057314482 3 1.809869155365488 1.0954787707135043 4 0.9608371216363327 0.7754348176648624 5 0.6261580576669065 0.6316689222641418 6 0.4335197175249178 0.5248021889608459 7 0.3571601860323149 0.5044250119183017 8 0.3195935645035741 0.5158501307602297 9 0.2751630158997797 0.4996525436826489 >10 5.335691545073959 28.57456979349784 >50 2.3203026096961112 33.11368270995458 >100 0.5591646244960787 14.059055170714712 >500 0.0012513932371060082 0.18123954256727193 >1k 4.1713107903533606E-4 0.14824864371128374 >5k 0.0 0.0 >10k+ 2.0856553951766803E-4 0.688769174075019 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16368 0.6826784116715987 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.170811410505857E-5 0.0 0.0 0.01689178621254872 0.0 2 4.170811410505857E-5 0.0 0.0 0.059267230143288226 0.0 3 4.170811410505857E-5 0.0 0.0 0.08312427141138173 0.0 4 4.170811410505857E-5 0.0 0.0 0.14501911274328863 0.0 5 4.170811410505857E-5 0.0 0.0 0.2555873232357989 0.0 6 4.170811410505857E-5 0.0 0.0 0.43109506738988534 0.0 7 4.170811410505857E-5 0.0 0.0 0.5234785401325901 0.0 8 1.251243423151757E-4 0.0 0.0 0.7130002106259762 0.0 9 1.251243423151757E-4 0.0 0.0 0.7905355947472801 0.0 10 1.251243423151757E-4 0.0 0.0 0.9089449306915414 0.0 11 1.251243423151757E-4 0.0 0.0 1.062472498712262 0.0 12 1.251243423151757E-4 0.0 0.0 1.1804647535154726 0.0 13 1.251243423151757E-4 0.0 0.0 1.2429852165589554 0.0 14 1.251243423151757E-4 0.0 0.0 1.2770190376686832 0.0 15 1.251243423151757E-4 0.0 0.0 1.3135970537388195 0.0 16 1.251243423151757E-4 0.0 0.0 1.379370749682497 0.0 17 1.251243423151757E-4 0.0 0.0 1.452818738621505 0.0 18 1.6683245642023427E-4 0.0 0.0 1.5450353789077895 0.0 19 1.6683245642023427E-4 0.0 0.0 1.6078895068641128 0.0 20 1.6683245642023427E-4 0.0 0.0 1.6800028361517592 0.0 21 1.6683245642023427E-4 0.0 0.0 1.7687577029673238 0.0 22 1.6683245642023427E-4 0.0 0.0 1.8708174581824022 0.0 23 1.6683245642023427E-4 0.0 0.0 1.9799675927953404 0.0 24 1.6683245642023427E-4 0.0 0.0 2.0690561245237453 0.0 25 1.6683245642023427E-4 0.0 0.0 2.152096979706917 0.0 26 1.6683245642023427E-4 0.0 0.0 2.2334695103258864 0.0 27 1.6683245642023427E-4 0.0 0.0 2.3205560525772486 0.0 28 1.6683245642023427E-4 0.0 0.0 2.404723026841257 0.0 29 1.6683245642023427E-4 0.0 0.0 2.5020280570483586 0.0 30 1.6683245642023427E-4 0.0 0.0 2.6416668230720948 0.0 31 1.6683245642023427E-4 0.0 0.0 2.7563224287469006 0.0 32 1.6683245642023427E-4 0.0 0.0 2.8586324326466093 0.0 33 1.6683245642023427E-4 0.0 0.0 2.960900728432213 0.0 34 1.6683245642023427E-4 0.0 0.0 3.077182950557116 0.0 35 1.6683245642023427E-4 0.0 0.0 3.206603228625113 0.0 36 1.6683245642023427E-4 0.0 0.0 3.3229271588641214 0.0 37 1.6683245642023427E-4 0.0 0.0 3.4490942040319235 0.0 38 1.6683245642023427E-4 0.0 0.0 3.594738938486788 0.0 39 2.0854057052529284E-4 0.0 0.0 3.821088873734941 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCG 20 7.0348225E-4 45.0 1 CTTAACG 60 3.6379788E-12 41.249996 1 CGTTTTT 8255 0.0 40.96608 1 GGGCGAT 3655 0.0 40.1368 7 TACGGGA 725 0.0 40.03448 4 TCGTTGA 465 0.0 39.67742 24 TCGTAAG 125 0.0 39.6 1 GGCGATA 790 0.0 39.3038 8 TTAATCG 465 0.0 39.19355 20 TAATCGT 475 0.0 38.36842 21 AACGGGA 775 0.0 38.322582 4 TAGGGAC 2400 0.0 38.25 5 AGGGCGA 2010 0.0 37.94776 6 GCGGGAT 1365 0.0 37.582417 5 GACCGAT 1475 0.0 37.52542 9 GTCGACA 30 1.14029186E-4 37.499996 33 TTAGGGA 2895 0.0 37.461143 4 CGTAAGG 505 0.0 37.425743 2 TCGTCCC 610 0.0 37.2541 38 ATTGGGA 1985 0.0 36.952145 4 >>END_MODULE