##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547402_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3588124 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30377517610874 31.0 31.0 33.0 30.0 34.0 2 31.706748986378397 31.0 31.0 34.0 30.0 34.0 3 31.729182157584297 31.0 31.0 34.0 30.0 34.0 4 35.56467474368221 37.0 35.0 37.0 33.0 37.0 5 35.4902492221562 37.0 35.0 37.0 33.0 37.0 6 35.53340129828289 37.0 35.0 37.0 33.0 37.0 7 35.93878667515393 37.0 35.0 37.0 35.0 37.0 8 35.946620295173744 37.0 35.0 37.0 35.0 37.0 9 37.69848227095831 39.0 37.0 39.0 35.0 39.0 10 36.87267859193272 39.0 37.0 39.0 32.0 39.0 11 36.67666752876991 39.0 35.0 39.0 32.0 39.0 12 36.43600026086055 39.0 35.0 39.0 32.0 39.0 13 36.329233605081654 39.0 35.0 39.0 32.0 39.0 14 37.41891640311204 39.0 36.0 41.0 32.0 41.0 15 37.53118537709399 40.0 36.0 41.0 32.0 41.0 16 37.59633111899143 40.0 36.0 41.0 32.0 41.0 17 37.49937125918725 39.0 36.0 41.0 32.0 41.0 18 37.32391327612981 39.0 36.0 41.0 32.0 41.0 19 37.19816121181988 39.0 36.0 41.0 32.0 41.0 20 37.00157575379223 39.0 35.0 41.0 32.0 41.0 21 36.880617838179504 38.0 35.0 41.0 31.0 41.0 22 36.79492263923989 38.0 35.0 40.0 31.0 41.0 23 36.686733513111584 38.0 35.0 40.0 31.0 41.0 24 36.57972857125339 38.0 35.0 40.0 31.0 41.0 25 36.50527211434164 38.0 35.0 40.0 31.0 41.0 26 36.305985523354266 38.0 35.0 40.0 30.0 41.0 27 36.28539342564527 38.0 35.0 40.0 30.0 41.0 28 36.30175322814931 38.0 35.0 40.0 30.0 41.0 29 36.29413838540697 38.0 35.0 40.0 30.0 41.0 30 36.23709855066324 38.0 35.0 40.0 30.0 41.0 31 36.12845682033285 38.0 35.0 40.0 30.0 41.0 32 35.883709983267025 38.0 35.0 40.0 29.0 41.0 33 35.593746760145414 38.0 34.0 40.0 27.0 41.0 34 35.2671008582758 38.0 34.0 40.0 25.0 41.0 35 35.04052479791668 38.0 34.0 40.0 24.0 41.0 36 34.802760997111584 38.0 34.0 40.0 23.0 41.0 37 34.755979726453155 38.0 34.0 40.0 23.0 41.0 38 34.660930057043736 38.0 34.0 40.0 23.0 41.0 39 34.528794712780275 38.0 33.0 40.0 23.0 41.0 40 34.42222648938554 38.0 33.0 40.0 22.0 41.0 41 34.38043501283679 38.0 33.0 40.0 22.0 41.0 42 34.2919614818217 37.0 33.0 40.0 22.0 41.0 43 34.17853312761766 37.0 33.0 40.0 21.0 41.0 44 34.08883890300335 37.0 33.0 40.0 21.0 41.0 45 33.94823646005545 37.0 33.0 40.0 20.0 41.0 46 33.87191774866197 37.0 33.0 40.0 20.0 41.0 47 33.833360552756815 37.0 33.0 40.0 20.0 41.0 48 33.70402332806781 36.0 33.0 40.0 20.0 41.0 49 33.576520488143665 36.0 33.0 40.0 20.0 41.0 50 33.472158152839754 36.0 32.0 40.0 20.0 41.0 51 33.036001821564696 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 3.0 13 10.0 14 42.0 15 120.0 16 321.0 17 798.0 18 1735.0 19 3514.0 20 5922.0 21 9602.0 22 14808.0 23 22062.0 24 32664.0 25 49897.0 26 71388.0 27 84107.0 28 86447.0 29 89315.0 30 98570.0 31 114561.0 32 138287.0 33 173710.0 34 254904.0 35 329469.0 36 304402.0 37 370137.0 38 520666.0 39 810447.0 40 212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.335490077823398 23.410172000744677 27.684355390170463 18.569982531261463 2 34.68740210761947 24.467298231610723 27.874287510688035 12.971012150081771 3 26.797122953387344 24.68936413568762 35.40808511634492 13.105427794580121 4 23.350530806627642 27.341390654280623 35.134209408593456 14.173869130498277 5 21.820204652904973 31.20469080778702 33.38298787890274 13.59211666040527 6 21.03399993980141 39.32860179860005 29.796183186534243 9.841215075064296 7 86.49274662748556 2.2389137053234505 10.136857031696787 1.1314826354942025 8 87.16928400467765 1.6442296865994597 9.98923114139868 1.1972551673242062 9 82.41092002394566 3.8092607724816645 11.746723357386756 2.033095846185918 10 34.2007411115112 30.25271701869835 24.434774272015126 11.111767597775328 11 28.437757446509654 25.138540362596164 29.65608211979296 16.767620071101224 12 27.380352518474837 23.254965547455996 31.136214913419934 18.22846702064923 13 23.14044888080791 25.58470666008198 32.74649928486307 18.528345174247043 14 19.98699041616176 27.653670831888753 33.06747481413686 19.29186393781263 15 19.61498543528596 25.79498367391985 37.12706138360882 17.46296950718537 16 22.88900829514253 24.57429007470199 35.77320627715207 16.763495353003407 17 22.22175153367052 24.83899664560088 32.20850227026714 20.730749550461468 18 22.54506811916199 25.25559317348007 33.215184313585596 18.984154393772346 19 23.75767950048549 27.149563393015402 30.695148774122632 18.39760833237647 20 25.709981037444635 26.868051382839614 30.416312256767046 17.005655322948705 21 24.473513178474324 26.342651480272146 32.17048797644674 17.01334736480679 22 23.509388192827227 24.090555398865813 32.19398214777416 20.2060742605328 23 21.616170455647577 26.709528433242554 32.26053503167672 19.413766079433152 24 20.677100345473008 26.736394840312094 34.60914394262852 17.977360871586377 25 21.313003675458262 27.42349484020062 32.148275812095676 19.11522567224544 26 20.332324077986154 29.658283827426253 30.70699340379541 19.30239869079218 27 19.73025458428973 28.93656963917635 32.09788736398185 19.235288412552073 28 18.61005918413076 28.671472892241184 33.80390421289788 18.914563710730175 29 19.917065296517066 26.783940577304467 33.56015566909059 19.73883845708788 30 20.908446865269987 27.37154568794167 33.06393536009347 18.656072086694884 31 22.76050103062213 26.94820468857821 31.04143000632085 19.24986427447881 32 23.31142959384904 27.3615125898659 30.555354274267 18.771703542018056 33 22.476229918475504 27.531239165647563 30.152441777374474 19.84008913850246 34 20.26262191607648 27.94318145080828 31.85734383761542 19.93685279549982 35 20.069596256985545 28.359359932934314 30.95333383127227 20.617709978807866 36 22.07515682289687 29.37457010961717 28.915137826897848 19.635135240588117 37 20.940942955148707 29.51213503212264 29.636907754581504 19.910014258147154 38 20.839134879396585 29.917444324666594 28.96009168022064 20.283329115716178 39 20.653355346693704 29.675702400474453 28.716120178678327 20.954822074153512 40 22.17016468773097 28.14192040185902 29.080433117696042 20.607481792713962 41 19.796473031589766 27.914252684689828 29.690696308154347 22.598577975566062 42 20.6983092000165 28.716231657545837 28.51869110432081 22.066768038116855 43 20.66308187788382 28.321401378547677 29.318050323790374 21.697466419778134 44 20.475853119903327 29.290292085780763 29.117471971425736 21.116382822890177 45 20.081385147224566 29.858555612905242 28.2428087769542 21.817250462915997 46 20.91070431233703 29.38387859505413 28.503251281170883 21.202165811437954 47 20.502858875557255 28.89888978195848 29.594044130024493 21.004207212459768 48 20.896184189844053 27.86369701827473 30.44334588213785 20.796772909743364 49 20.640368058628965 27.99493551504909 30.233904959806296 21.13079146651565 50 20.08339176683972 28.88236303985035 30.17451459314115 20.85973060016878 51 19.539235544813945 29.09768447244298 29.2967021206625 22.066377862080575 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1416.0 1 2491.5 2 3567.0 3 46309.0 4 89051.0 5 58820.0 6 28589.0 7 28743.0 8 28897.0 9 30870.5 10 32844.0 11 34654.0 12 36464.0 13 36657.5 14 36851.0 15 35524.0 16 34197.0 17 32298.0 18 30399.0 19 28843.0 20 27287.0 21 27087.5 22 26888.0 23 27698.5 24 28509.0 25 30459.5 26 36772.5 27 41135.0 28 47592.5 29 54050.0 30 60190.0 31 66330.0 32 77334.0 33 88338.0 34 99010.0 35 109682.0 36 121120.0 37 132558.0 38 145539.0 39 158520.0 40 173121.5 41 187723.0 42 205161.0 43 222599.0 44 231740.0 45 240881.0 46 249907.0 47 258933.0 48 262213.5 49 265494.0 50 258866.0 51 252238.0 52 233152.0 53 214066.0 54 199031.0 55 183996.0 56 172996.0 57 161996.0 58 150786.5 59 139577.0 60 127875.5 61 116174.0 62 101475.5 63 86777.0 64 73254.5 65 59732.0 66 49775.0 67 39818.0 68 32223.0 69 24628.0 70 19956.0 71 15284.0 72 13400.0 73 11516.0 74 10183.5 75 7235.5 76 5620.0 77 3855.5 78 2091.0 79 1542.0 80 993.0 81 848.0 82 703.0 83 454.5 84 206.0 85 160.5 86 115.0 87 93.0 88 71.0 89 58.5 90 46.0 91 28.0 92 10.0 93 6.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3588124.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.903849693201078 #Duplication Level Percentage of deduplicated Percentage of total 1 78.19892765526319 18.692554128409164 2 6.879893475627248 3.28911879093257 3 2.7211566605909137 1.951383594192545 4 1.496864328218313 1.4312327965137983 5 1.0195950002499632 1.2186122816957217 6 0.7321664060161578 1.0500957431892883 7 0.5582390262448018 0.9340843243364273 8 0.463429592359524 0.8862201055314807 9 0.37968580402340474 0.81683571510159 >10 5.72719300258882 33.71267104506514 >50 1.5547188032376587 25.629095033313053 >100 0.2653001573750992 8.053353898249139 >500 0.0017688051281177192 0.28272063783229284 >1k 9.433627349958396E-4 0.346649890733871 >5k 0.0 0.0 >10k+ 1.1792034187447995E-4 1.7053720149040437 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60501 1.6861457407826483 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.786971687712019E-5 0.0 0.0 0.04592929341349407 0.0 2 2.786971687712019E-5 0.0 0.0 0.11749872635393871 0.0 3 2.786971687712019E-5 0.0 0.0 0.20386697895613418 0.0 4 2.786971687712019E-5 0.0 0.0 0.29809449171767755 0.0 5 2.786971687712019E-5 0.0 0.0 0.5035221748189305 0.0 6 2.786971687712019E-5 0.0 0.0 0.9478212012739805 0.0 7 2.786971687712019E-5 0.0 0.0 1.2077620505868805 0.0 8 2.786971687712019E-5 0.0 0.0 1.6161927514210768 0.0 9 2.786971687712019E-5 0.0 0.0 1.8721761009374258 0.0 10 2.786971687712019E-5 0.0 0.0 2.174423180469794 0.0 11 2.786971687712019E-5 0.0 0.0 2.475806298778972 0.0 12 2.786971687712019E-5 0.0 0.0 2.7086020438535567 0.0 13 2.786971687712019E-5 0.0 0.0 2.8782728802014645 0.0 14 2.786971687712019E-5 0.0 0.0 2.99986845493634 0.0 15 2.786971687712019E-5 0.0 0.0 3.1010633969171635 0.0 16 2.786971687712019E-5 0.0 0.0 3.2306297106788953 0.0 17 2.786971687712019E-5 0.0 0.0 3.371566868926492 0.0 18 2.786971687712019E-5 0.0 0.0 3.524376526563742 0.0 19 2.786971687712019E-5 0.0 0.0 3.643268738761537 0.0 20 2.786971687712019E-5 0.0 0.0 3.762216690393086 0.0 21 2.786971687712019E-5 0.0 0.0 3.901175098742407 0.0 22 2.786971687712019E-5 0.0 0.0 4.05008299601686 0.0 23 2.786971687712019E-5 0.0 0.0 4.215629114266954 0.0 24 2.786971687712019E-5 0.0 0.0 4.357569582322127 0.0 25 2.786971687712019E-5 0.0 0.0 4.491344223332304 0.0 26 2.786971687712019E-5 0.0 0.0 4.610793829867641 0.0 27 2.786971687712019E-5 0.0 0.0 4.741279844286318 0.0 28 2.786971687712019E-5 0.0 0.0 4.876754538025999 0.0 29 2.786971687712019E-5 0.0 0.0 5.0239066431371935 0.0 30 2.786971687712019E-5 0.0 0.0 5.195166053347097 0.0 31 2.786971687712019E-5 0.0 0.0 5.352713562853458 0.0 32 2.786971687712019E-5 0.0 0.0 5.530633835396993 0.0 33 2.786971687712019E-5 2.786971687712019E-5 0.0 5.683554971901751 0.0 34 2.786971687712019E-5 2.786971687712019E-5 0.0 5.845310808656557 0.0 35 2.786971687712019E-5 2.786971687712019E-5 0.0 6.010968405774159 0.0 36 2.786971687712019E-5 2.786971687712019E-5 0.0 6.175929259969834 0.0 37 2.786971687712019E-5 2.786971687712019E-5 0.0 6.340695026147368 0.0 38 2.786971687712019E-5 2.786971687712019E-5 0.0 6.528063132712248 0.0 39 2.786971687712019E-5 2.786971687712019E-5 0.0 6.807986569026043 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 29850 0.0 43.379395 1 TACGGGA 1090 0.0 40.871563 4 TACGTCG 40 3.4609548E-7 39.375004 1 ACGGGAC 880 0.0 38.86364 5 AGGGCGA 3385 0.0 38.818317 6 GGGCGAT 6855 0.0 38.369804 7 GACCGAT 2135 0.0 38.14988 9 CACGACC 1250 0.0 37.98 27 TAGGGCG 1300 0.0 37.73077 5 GTTTTTT 35070 0.0 37.686054 2 TGGGCGA 1960 0.0 37.538265 6 ACGGGTA 625 0.0 37.44 5 ATAGGGT 2585 0.0 37.340427 4 CGGGTAT 375 0.0 37.2 6 CGTTAGG 510 0.0 37.058823 2 CGAGGGA 2285 0.0 37.02407 4 CGACCAA 1285 0.0 36.945522 29 TAGGGTC 1890 0.0 36.904762 5 TAGGGAT 4435 0.0 36.83202 5 ACGACCA 1295 0.0 36.486485 28 >>END_MODULE