##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547401_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3352100 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25696697592554 31.0 31.0 33.0 30.0 34.0 2 31.660701948032578 31.0 31.0 34.0 30.0 34.0 3 31.747276632558695 31.0 31.0 34.0 30.0 34.0 4 35.542027385817846 37.0 35.0 37.0 33.0 37.0 5 35.44197189821306 37.0 35.0 37.0 33.0 37.0 6 35.47225142448018 37.0 35.0 37.0 33.0 37.0 7 35.91360490438829 37.0 35.0 37.0 35.0 37.0 8 35.9172259180812 37.0 35.0 37.0 35.0 37.0 9 37.6790895259688 39.0 37.0 39.0 35.0 39.0 10 36.752748426359595 39.0 37.0 39.0 32.0 39.0 11 36.54124578622356 39.0 35.0 39.0 32.0 39.0 12 36.01031771128546 37.0 35.0 39.0 31.0 39.0 13 35.706678500044745 38.0 35.0 39.0 30.0 39.0 14 36.69232809283733 39.0 35.0 41.0 31.0 41.0 15 36.959147400137226 39.0 35.0 41.0 31.0 41.0 16 37.1097595537126 39.0 35.0 41.0 32.0 41.0 17 37.050648548670985 39.0 35.0 41.0 32.0 41.0 18 36.94206288595209 38.0 35.0 40.0 32.0 41.0 19 36.86107813012738 38.0 35.0 40.0 31.0 41.0 20 36.677023656812146 38.0 35.0 40.0 31.0 41.0 21 36.54420244026133 38.0 35.0 40.0 31.0 41.0 22 36.44502819128308 38.0 35.0 40.0 31.0 41.0 23 36.389138152203095 38.0 35.0 40.0 31.0 41.0 24 36.277367620297724 38.0 35.0 40.0 31.0 41.0 25 36.176814832493065 38.0 35.0 40.0 30.0 41.0 26 35.96749380985054 38.0 34.0 40.0 30.0 41.0 27 35.94299483905611 38.0 34.0 40.0 30.0 41.0 28 36.02080695683303 38.0 35.0 40.0 30.0 41.0 29 36.07501327526028 38.0 35.0 40.0 30.0 41.0 30 36.06962680110975 38.0 35.0 40.0 30.0 41.0 31 35.93893797917723 38.0 35.0 40.0 30.0 41.0 32 35.73422272605232 38.0 34.0 40.0 29.0 41.0 33 35.52172250231198 38.0 34.0 40.0 28.0 41.0 34 35.302610602309 38.0 34.0 40.0 27.0 41.0 35 35.1546970555771 38.0 34.0 40.0 26.0 41.0 36 34.90866978908744 38.0 34.0 40.0 25.0 41.0 37 34.8441755914203 38.0 34.0 40.0 24.0 41.0 38 34.78600578741684 37.0 34.0 40.0 24.0 41.0 39 34.68114346230721 37.0 34.0 40.0 24.0 41.0 40 34.54782971868381 37.0 33.0 40.0 23.0 41.0 41 34.55457504251066 37.0 34.0 40.0 23.0 41.0 42 34.46753766295755 37.0 33.0 40.0 23.0 41.0 43 34.36801378240506 37.0 33.0 40.0 23.0 41.0 44 34.27188150711494 37.0 33.0 40.0 23.0 41.0 45 34.10832940544733 37.0 33.0 40.0 23.0 41.0 46 34.04829629187673 36.0 33.0 40.0 23.0 41.0 47 34.023522567942486 36.0 33.0 40.0 23.0 41.0 48 33.946835416604515 36.0 33.0 40.0 23.0 41.0 49 33.84175293099848 36.0 33.0 40.0 23.0 41.0 50 33.70762059604427 36.0 33.0 40.0 22.0 41.0 51 33.24822201008323 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 1.0 11 3.0 12 1.0 13 17.0 14 29.0 15 100.0 16 314.0 17 848.0 18 1878.0 19 3565.0 20 6029.0 21 9645.0 22 14439.0 23 21166.0 24 30344.0 25 43694.0 26 60700.0 27 70825.0 28 76464.0 29 83297.0 30 95715.0 31 113683.0 32 139196.0 33 176198.0 34 279975.0 35 384743.0 36 248734.0 37 307455.0 38 456525.0 39 726319.0 40 195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.307777214283583 24.862414605769516 30.188120879448704 15.641687300498194 2 30.86685958056144 25.413949464514786 30.21022642522598 13.508964529697801 3 27.230124399630085 25.193281823334623 33.69156648071358 13.88502729632171 4 23.911309328480655 28.05617374183348 33.69663792846275 14.335879001223114 5 21.8448733629665 32.32176844366218 32.17329435279377 13.66006384057755 6 20.948987202052443 41.72718594314012 28.029921541720114 9.293905313087318 7 89.56937442200412 2.7024850093970945 6.819903940813221 0.9082366277855672 8 90.29838011992483 1.8658452910116048 6.564332806300528 1.271441782763044 9 86.35729840995197 3.441305450314728 8.399182601951017 1.8022135377822859 10 40.00829330867218 25.447271859431403 23.254765669281944 11.289669162614482 11 36.062259479132486 23.113868917991706 24.628740192715014 16.195131410160794 12 34.01974881417619 22.597864025536232 26.03818501834671 17.344202141940873 13 23.503594761492796 32.13734673786581 27.209599952268725 17.14945854837266 14 18.764028519435577 34.18889651263387 28.466394200650342 18.580680767280214 15 17.86653142806002 25.502848960353212 40.023865636466695 16.60675397512007 16 19.831061125861403 23.088422183109095 39.48205602458161 17.5984606664479 17 20.412577190417945 22.882312580173622 29.86969362489186 26.83541660451657 18 22.340652128516453 24.807672802124042 32.91539631872558 19.93627875063393 19 25.99451090361266 26.131827809432895 27.830166164493896 20.04349512246055 20 27.458369380388415 26.071746069627995 28.104352495450613 18.36553205453298 21 23.407267086304106 27.45407356582441 30.733092688165627 18.405566659705855 22 23.236031144655588 24.34118910533695 29.66662689060589 22.756152859401567 23 21.200083529727635 28.440678977357475 28.69997911756809 21.6592583753468 24 20.882491572447123 25.643268398914117 35.57745890635721 17.896781122281556 25 19.86307091077235 26.20957012022314 33.91590346350049 20.01145550550401 26 19.776319322215922 31.413501983831033 28.761761283971243 20.048417409981802 27 19.180752364189612 31.74791921482056 30.083678887861343 18.987649533128486 28 16.808657259628294 29.281196861668807 35.07449061782167 18.83565526088124 29 17.562990364249277 26.226753378479163 35.0026848841025 21.207571373169056 30 20.06273679186182 28.67011723993914 31.69216312162525 19.57498284657379 31 24.377285880492824 27.396229229438262 28.984099519704067 19.242385370364843 32 25.690820679574 26.228155484621578 29.165120372303928 18.91590346350049 33 24.719071626741446 27.5555920169446 27.65749828465738 20.067838071656574 34 19.776349154261506 28.03755854538946 29.694221532770506 22.491870767578533 35 19.60394976283524 27.38531070075475 31.317323468870264 21.69341606753975 36 25.65794576534113 27.10026550520569 27.740461203424722 19.501327526028458 37 20.31058142656842 30.54356970257451 29.956534709585036 19.18931416127204 38 21.092688165627518 30.236985770114256 27.675069359505983 20.995256704752244 39 20.541421795292504 29.733003192028878 28.909101757107486 20.816473255571136 40 23.342203394886788 26.657736941022048 28.112794964350705 21.88726469974046 41 19.109483607290954 26.308015870648248 29.130515199427226 25.451985322633575 42 21.234300886011752 26.631574237045434 27.36084842337639 24.77327645356642 43 21.47394170818293 27.472300945675844 27.89511052772889 23.158646818412336 44 20.711553951254437 28.879389039706453 28.708719906924017 21.700337102115093 45 19.268965722979626 32.06676411801557 26.14644551176874 22.51782464723606 46 21.370692998418903 30.12025297574655 27.442946212821813 21.06610781301274 47 20.783061364517767 27.850392291399423 28.613943498105666 22.752602845977147 48 21.56418364607261 26.2175352763939 30.437218460069808 21.78106261746368 49 21.13206646579756 25.40479102652069 31.316995316368846 22.14614719131291 50 20.016079472569434 30.314429760448675 28.301124668118494 21.368366098863397 51 19.19545956266221 30.994898720205242 27.0613346857194 22.748307031413145 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1524.0 1 2402.0 2 3280.0 3 21318.0 4 39356.0 5 27810.5 6 16265.0 7 16912.5 8 17560.0 9 19022.0 10 20484.0 11 21230.0 12 21976.0 13 21919.5 14 21863.0 15 20793.0 16 19723.0 17 18744.0 18 17765.0 19 17367.0 20 16969.0 21 17221.0 22 17473.0 23 18609.5 24 19746.0 25 20991.0 26 26480.5 27 30725.0 28 36233.0 29 41741.0 30 46292.5 31 50844.0 32 65380.0 33 79916.0 34 86086.0 35 92256.0 36 106640.5 37 121025.0 38 139511.5 39 157998.0 40 185045.0 41 212092.0 42 241022.5 43 269953.0 44 275569.0 45 281185.0 46 289839.0 47 298493.0 48 288705.0 49 278917.0 50 265091.0 51 251265.0 52 238728.0 53 226191.0 54 208215.0 55 190239.0 56 168238.0 57 146237.0 58 130633.5 59 115030.0 60 101183.0 61 87336.0 62 76102.5 63 64869.0 64 53037.5 65 41206.0 66 32677.5 67 24149.0 68 18501.0 69 12853.0 70 10196.0 71 7539.0 72 6305.5 73 5072.0 74 4402.0 75 3094.0 76 2456.0 77 1920.5 78 1385.0 79 1059.0 80 733.0 81 477.0 82 221.0 83 167.0 84 113.0 85 79.5 86 46.0 87 40.5 88 35.0 89 23.5 90 12.0 91 11.0 92 10.0 93 6.5 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3352100.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.734945974621542 #Duplication Level Percentage of deduplicated Percentage of total 1 81.8866159440643 16.16027941700692 2 7.4769377456241015 2.9511392493100046 3 2.4167407003120642 1.4308274146598288 4 1.1462436019867677 0.9048422223585784 5 0.6638947107080574 0.6550963124330256 6 0.47059477628624746 0.5572297491568923 7 0.3109273442657786 0.4295294038782385 8 0.2534833982242011 0.40019849355344683 9 0.19908861389435795 0.35361027354306984 >10 2.5622783296498453 12.33845238620557 >50 1.2123494307055087 17.506684201450216 >100 1.3955062820066777 44.77143036805148 >500 0.004728936869517777 0.6307888053686966 >1k 4.576390518888171E-4 0.16130226789316454 >5k 0.0 0.0 >10k+ 1.5254635062960569E-4 0.7485894351309126 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24866 0.7418036454759703 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.949613675009695E-5 0.0 0.0 0.02792279466603025 0.0 2 8.949613675009695E-5 0.0 0.0 0.11867187733062856 0.0 3 8.949613675009695E-5 0.0 0.0 0.17520360371110646 0.0 4 8.949613675009695E-5 0.0 0.0 0.3064944363234987 0.0 5 8.949613675009695E-5 0.0 0.0 0.5164523731392262 0.0 6 1.1932818233346261E-4 0.0 0.0 0.7998269741356164 0.0 7 1.1932818233346261E-4 0.0 0.0 0.93228125652576 0.0 8 1.1932818233346261E-4 0.0 0.0 1.23692610602309 0.0 9 1.1932818233346261E-4 0.0 0.0 1.3274663643686047 0.0 10 1.1932818233346261E-4 0.0 0.0 1.5026998001252947 0.0 11 1.1932818233346261E-4 0.0 0.0 1.752632678022732 0.0 12 1.1932818233346261E-4 0.0 0.0 1.9380090092777662 0.0 13 1.1932818233346261E-4 0.0 0.0 2.021240416455356 0.0 14 1.1932818233346261E-4 0.0 0.0 2.060201067987232 0.0 15 1.1932818233346261E-4 0.0 0.0 2.112198323439038 0.0 16 1.1932818233346261E-4 0.0 0.0 2.236031144655589 0.0 17 1.1932818233346261E-4 0.0 0.0 2.376271590942991 0.0 18 1.1932818233346261E-4 0.0 0.0 2.541421795292503 0.0 19 1.1932818233346261E-4 0.0 0.0 2.6366456847946065 0.0 20 1.1932818233346261E-4 0.0 0.0 2.7443692013961396 0.0 21 1.1932818233346261E-4 0.0 0.0 2.8993765102473077 0.0 22 1.1932818233346261E-4 0.0 0.0 3.0683153843859072 0.0 23 1.1932818233346261E-4 0.0 0.0 3.24632320038185 0.0 24 1.1932818233346261E-4 0.0 0.0 3.385489693028251 0.0 25 1.1932818233346261E-4 0.0 0.0 3.5184511201933115 0.0 26 1.1932818233346261E-4 0.0 0.0 3.6470869007487843 0.0 27 1.4916022791682825E-4 0.0 0.0 3.7797798395035946 0.0 28 1.4916022791682825E-4 0.0 0.0 3.912950090987739 0.0 29 1.4916022791682825E-4 0.0 0.0 4.063691417320485 0.0 30 1.4916022791682825E-4 0.0 0.0 4.236448793293756 0.0 31 1.4916022791682825E-4 0.0 0.0 4.396080069210345 0.0 32 1.4916022791682825E-4 0.0 0.0 4.546075594403508 0.0 33 1.4916022791682825E-4 0.0 0.0 4.69908415620059 0.0 34 1.4916022791682825E-4 0.0 0.0 4.852570030727007 0.0 35 1.4916022791682825E-4 0.0 0.0 5.044360251782464 0.0 36 1.4916022791682825E-4 0.0 0.0 5.207899525670475 0.0 37 1.4916022791682825E-4 0.0 0.0 5.38176068733033 0.0 38 1.4916022791682825E-4 0.0 0.0 5.571253840875869 0.0 39 1.4916022791682825E-4 0.0 0.0 5.847826735479252 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAATCG 25 3.892411E-5 45.000004 24 CCGTCGA 25 3.892411E-5 45.000004 17 CGGTCGA 35 1.2128658E-7 45.000004 6 TATCCGA 30 2.166751E-6 45.000004 44 ATACTCG 125 0.0 43.2 44 TTTCGCG 110 0.0 42.954548 1 CGTTTTT 16735 0.0 42.942936 1 CGTTAGG 430 0.0 40.813957 2 TACGGGA 925 0.0 40.135136 4 CAATCGT 45 1.9301297E-8 40.000004 19 GACCGAT 2215 0.0 39.819412 9 TAGTACG 125 0.0 39.600002 1 TATCTCG 40 3.4608638E-7 39.375004 19 AGGGCGA 3060 0.0 38.823532 6 CGTATTA 35 6.251872E-6 38.57143 42 TTAGCGA 35 6.251872E-6 38.57143 29 TACCTCG 35 6.251872E-6 38.57143 1 CCGAACG 70 0.0 38.57143 1 ATAGGGT 2365 0.0 38.530655 4 TAGGGTC 1985 0.0 38.42569 5 >>END_MODULE