SRR1547399_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547399_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1191236
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16969	1.4244868355220965	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2058	0.1727617365492648	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCACG	20	7.0333906E-4	45.0	35
CTATCGG	50	2.1827873E-11	45.0	2
CGGTTCG	20	7.0333906E-4	45.0	44
CCCGTAT	20	7.0333906E-4	45.0	28
TAACCGC	20	7.0333906E-4	45.0	12
TACGATA	20	7.0333906E-4	45.0	36
CGTAGCG	20	7.0333906E-4	45.0	1
CGGTGAA	20	7.0333906E-4	45.0	6
GTATCGT	20	7.0333906E-4	45.0	25
TTACGCT	20	7.0333906E-4	45.0	27
CGGTCTA	70	0.0	45.0	31
ACGTAAC	25	3.890892E-5	45.0	28
CGGTCGA	20	7.0333906E-4	45.0	25
CCGCGAA	20	7.0333906E-4	45.0	36
TAGTGCG	55	1.8189894E-12	45.0	1
TATCGTA	20	7.0333906E-4	45.0	26
GCGTAAG	35	1.2119744E-7	45.0	1
TCGATAG	65	0.0	44.999996	1
TCTAGCG	30	2.1655687E-6	44.999996	1
CCCGATA	30	2.1655687E-6	44.999996	44