##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547397_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1781882 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.337934835191106 31.0 31.0 33.0 30.0 34.0 2 31.737584194688537 31.0 31.0 34.0 30.0 34.0 3 31.808361608681157 31.0 31.0 34.0 30.0 34.0 4 35.57999182886409 37.0 35.0 37.0 33.0 37.0 5 35.4781113451957 37.0 35.0 37.0 33.0 37.0 6 35.51263495562557 37.0 35.0 37.0 33.0 37.0 7 35.92041897274904 37.0 35.0 37.0 35.0 37.0 8 35.92116649699587 37.0 35.0 37.0 35.0 37.0 9 37.67745058314748 39.0 37.0 39.0 35.0 39.0 10 37.00950006790573 39.0 37.0 39.0 33.0 39.0 11 36.665790439546505 39.0 35.0 39.0 32.0 39.0 12 35.80137405282729 37.0 35.0 39.0 31.0 39.0 13 35.30017756506884 37.0 35.0 39.0 30.0 39.0 14 36.33096130944698 38.0 35.0 41.0 30.0 41.0 15 36.69585247507972 38.0 35.0 41.0 31.0 41.0 16 36.91923090305643 38.0 35.0 41.0 32.0 41.0 17 36.856768293298884 38.0 35.0 41.0 32.0 41.0 18 36.75690814543275 38.0 35.0 40.0 32.0 41.0 19 36.63984090977966 38.0 35.0 40.0 31.0 41.0 20 36.43574827064867 38.0 35.0 40.0 31.0 41.0 21 36.26312853488615 37.0 35.0 40.0 31.0 41.0 22 36.14018717288799 37.0 35.0 40.0 30.0 41.0 23 36.101414684025094 37.0 35.0 40.0 31.0 41.0 24 35.96973480847778 37.0 34.0 40.0 30.0 41.0 25 35.88199162458569 37.0 34.0 40.0 30.0 41.0 26 35.61143835562624 36.0 34.0 40.0 30.0 41.0 27 35.55913803495405 36.0 34.0 40.0 30.0 41.0 28 35.62651455034621 36.0 34.0 40.0 30.0 41.0 29 35.7031178271064 36.0 34.0 40.0 30.0 41.0 30 35.72772158874718 36.0 35.0 40.0 30.0 41.0 31 35.59011315002901 36.0 34.0 40.0 30.0 41.0 32 35.357371588017614 36.0 34.0 40.0 29.0 41.0 33 35.13278488699027 36.0 34.0 40.0 27.0 41.0 34 34.92285347739076 36.0 34.0 40.0 27.0 41.0 35 34.773271181817876 36.0 34.0 40.0 26.0 41.0 36 34.488422914648666 36.0 33.0 40.0 24.0 41.0 37 34.40536298138709 36.0 33.0 40.0 24.0 41.0 38 34.351363895027845 36.0 33.0 40.0 24.0 41.0 39 34.27992538226437 36.0 33.0 40.0 23.0 41.0 40 34.10576794647457 36.0 33.0 40.0 23.0 41.0 41 34.11293733255064 35.0 33.0 40.0 23.0 41.0 42 34.023427477240354 35.0 33.0 40.0 23.0 41.0 43 33.91573740573169 35.0 33.0 40.0 23.0 41.0 44 33.84082616020589 35.0 33.0 40.0 23.0 41.0 45 33.685626208693954 35.0 33.0 40.0 23.0 41.0 46 33.63111418152268 35.0 33.0 40.0 23.0 41.0 47 33.60076705415959 35.0 33.0 40.0 23.0 41.0 48 33.506341609601535 35.0 33.0 39.0 23.0 41.0 49 33.41759162503465 35.0 33.0 39.0 22.0 41.0 50 33.27587741500279 35.0 32.0 39.0 22.0 41.0 51 32.79316251019989 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 4.0 13 5.0 14 33.0 15 71.0 16 220.0 17 493.0 18 1147.0 19 2140.0 20 3727.0 21 5691.0 22 8657.0 23 12125.0 24 17323.0 25 24343.0 26 32952.0 27 39559.0 28 42797.0 29 46627.0 30 53198.0 31 62713.0 32 76704.0 33 98385.0 34 168600.0 35 251982.0 36 126451.0 37 148464.0 38 211978.0 39 345342.0 40 149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.45891927748302 24.40599321391652 29.615709682234854 15.519377826365607 2 30.49264766129295 26.619776169241284 29.9023167639608 12.985259405504964 3 28.272635337244555 25.123493025913053 33.15253198584418 13.451339650998214 4 24.452797660002176 28.412599711989905 32.14859345343856 14.986009174569359 5 22.082943763952944 33.209325870063225 31.206836367391332 13.5008939985925 6 21.3028135420864 41.420251172636576 27.682921764740875 9.594013520536153 7 87.76523922459512 3.572290421026757 7.413790587704461 1.248679766673663 8 88.57292458198691 2.6510734156358278 7.096036662360358 1.6799653400169035 9 84.3686618979259 5.06475737450628 8.40886209075573 2.1577186368120898 10 48.45719301278087 28.74864890043224 13.272147089425676 9.522010997361217 11 43.353768655836916 20.777919076571848 22.8635229493311 13.004789318260132 12 40.57726605914421 20.012997493661196 24.77891353075007 14.630822916444522 13 21.604068058378726 36.78240197723531 25.607756293626625 16.005773670759343 14 15.626455623885308 39.1922136258181 28.087157286509434 17.094173463787165 15 14.438610413035208 25.044531568308116 45.850118021283116 14.666739997373563 16 17.179252049237828 19.947504941404652 46.10361404402761 16.769628965329915 17 17.446553699964422 20.527004594019132 30.10075863609375 31.9256830699227 18 20.925291349258817 23.824136502866068 34.314674035654434 20.935898112220674 19 28.044617993784097 25.263008437146794 26.43048192865745 20.261891640411655 20 30.861246704327222 22.978345367426126 28.115385867302102 18.04502206094455 21 22.744940461826317 28.008813153732966 28.8785115961663 20.36773478827442 22 24.24352454315157 24.807703315932255 26.62471476786903 24.324057373047147 23 21.734828681136012 29.370687845772053 26.19971468368837 22.694768789403565 24 20.64951551225053 23.465807500159944 38.23698763442248 17.647689353167046 25 19.027915428743317 24.964503822363096 35.42142521221944 20.586155536674145 26 18.306880029092838 33.499300178126276 27.785958890656058 20.407860902124835 27 19.683177673942495 34.192331478739895 28.185031332041067 17.939459515276546 28 16.714967657791032 30.04705137601704 36.61774460935124 16.62023635684069 29 16.447834368381294 26.118676769842224 35.83985920504276 21.59362965673372 30 18.85573792203973 29.997272546666952 31.03847505053646 20.108514480756863 31 26.638127552778467 28.128293568260975 26.130518182461017 19.103060696499544 32 28.461368373438873 27.19590859551867 27.418482256400818 16.924240774641643 33 26.206168534167805 28.303445458229 26.309710744033556 19.18067526356964 34 19.8457024651464 28.618617843381323 28.46344482968008 23.072234861792197 35 21.170593787916374 25.94997873035364 29.850012514857887 23.029414966872107 36 28.210173288691394 27.19321481444899 25.038021597389726 19.558590299469884 37 21.32251181615842 31.779152603820005 28.975431594235758 17.922903985785815 38 20.326822988278686 31.89088839777269 25.467511316686515 22.314777297262108 39 21.68847319856197 30.67307487252242 27.621469884088846 20.01698204482676 40 24.002206655659577 27.018736369748392 25.95424388371396 23.02481309087807 41 17.253667751287683 25.683350524894465 29.8919906031937 27.170991120624148 42 21.274584961293733 26.422961789837935 26.43934895801181 25.86310429085652 43 21.708395954389797 26.594914814785714 27.55878335377988 24.13790587704461 44 20.5345808532776 29.806799776865134 28.249120873323825 21.40949849653344 45 18.721946795579054 34.66778383753806 23.92840827843819 22.681861088444688 46 21.526621852625482 32.64610114474472 25.435017582533526 20.39225942009628 47 21.669392249318417 27.529264002891324 28.59252183926882 22.20882190852144 48 22.18396055406587 24.79227019522056 31.231024276579483 21.79274497413409 49 20.523188404170423 25.55646221242484 31.491366992876074 22.428982390528667 50 19.745864204251458 31.52616166502608 27.670406906854662 21.0575672238678 51 17.749267347669488 32.20589242160816 25.986120293038482 24.058719937683865 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1077.0 1 1984.5 2 2892.0 3 14541.0 4 26190.0 5 17987.0 6 9784.0 7 9988.5 8 10193.0 9 11007.0 10 11821.0 11 12278.0 12 12735.0 13 12327.5 14 11920.0 15 11490.5 16 11061.0 17 10657.0 18 10253.0 19 9744.5 20 9236.0 21 8653.0 22 8070.0 23 8291.0 24 8512.0 25 10526.5 26 13417.0 27 14293.0 28 17856.0 29 21419.0 30 26473.0 31 31527.0 32 37562.5 33 43598.0 34 44852.5 35 46107.0 36 50196.0 37 54285.0 38 62052.0 39 69819.0 40 94630.0 41 119441.0 42 140092.0 43 160743.0 44 162050.5 45 163358.0 46 155620.5 47 147883.0 48 138302.0 49 128721.0 50 118966.0 51 109211.0 52 101829.5 53 94448.0 54 89856.0 55 85264.0 56 79307.0 57 73350.0 58 71518.0 59 69686.0 60 67185.5 61 64685.0 62 56572.5 63 48460.0 64 39220.0 65 29980.0 66 25513.0 67 21046.0 68 17512.5 69 13979.0 70 11848.0 71 9717.0 72 8098.0 73 6479.0 74 5050.5 75 2796.0 76 1970.0 77 1636.0 78 1302.0 79 982.5 80 663.0 81 491.0 82 319.0 83 219.5 84 120.0 85 87.5 86 55.0 87 43.0 88 31.0 89 19.5 90 8.0 91 5.0 92 2.0 93 2.0 94 2.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1781882.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.70472270646843 #Duplication Level Percentage of deduplicated Percentage of total 1 83.8552816664633 15.684897910440021 2 6.536234565724838 2.4451691019263446 3 1.9660743380943801 1.1032462594307653 4 0.9047470630359812 0.6769217173431896 5 0.5204821090641023 0.4867736761860947 6 0.34335978415802415 0.3853469730737217 7 0.23067011969680087 0.30202344379175794 8 0.17843537010615537 0.2670067295089363 9 0.15125134791802466 0.25462030696076093 >10 2.3096129773880625 11.476307678105629 >50 1.4466342834810255 19.948699119349282 >100 1.5517779009174604 45.08707186040588 >500 0.0042299241847432 0.5254103853655155 >1k 9.064123253021143E-4 0.36310226158690306 >5k 0.0 0.0 >10k+ 3.021374417673714E-4 0.9934025765252267 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17578 0.9864850758916697 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3261 0.18300875142125012 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1821 0.10219531933090967 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6836131685487592E-4 0.0 0.0 0.026488847185167145 0.0 2 1.6836131685487592E-4 0.0 0.0 0.11010830122308884 0.0 3 1.6836131685487592E-4 0.0 0.0 0.16173910505858413 0.0 4 1.6836131685487592E-4 0.0 0.0 0.34738551711056065 0.0 5 1.6836131685487592E-4 0.0 0.0 0.5573320792285908 0.0 6 1.6836131685487592E-4 0.0 0.0 0.8577447889366412 0.0 7 1.6836131685487592E-4 0.0 0.0 0.9853065466736854 0.0 8 1.6836131685487592E-4 0.0 0.0 1.2664138253823767 0.0 9 1.6836131685487592E-4 0.0 0.0 1.3493037137139272 0.0 10 1.6836131685487592E-4 0.0 0.0 1.5040838843425097 0.0 11 2.2448175580650121E-4 0.0 0.0 1.742034545497401 0.0 12 2.2448175580650121E-4 0.0 0.0 1.9152222201021167 0.0 13 2.2448175580650121E-4 0.0 0.0 1.990816451369956 0.0 14 2.2448175580650121E-4 0.0 0.0 2.020055200063753 0.0 15 2.2448175580650121E-4 0.0 0.0 2.057319171527632 0.0 16 2.2448175580650121E-4 0.0 0.0 2.149861775358862 0.0 17 2.2448175580650121E-4 0.0 0.0 2.247062375623077 0.0 18 2.2448175580650121E-4 0.0 0.0 2.382032031301736 0.0 19 2.2448175580650121E-4 0.0 0.0 2.4523509413081226 0.0 20 2.2448175580650121E-4 0.0 0.0 2.524634066677816 0.0 21 2.2448175580650121E-4 0.0 0.0 2.631375141563807 0.0 22 2.2448175580650121E-4 0.0 0.0 2.740641636202622 0.0 23 2.2448175580650121E-4 0.0 0.0 2.8670809851606336 0.0 24 2.2448175580650121E-4 0.0 0.0 2.953899304218798 0.0 25 2.2448175580650121E-4 0.0 0.0 3.0288762106581695 0.0 26 2.2448175580650121E-4 0.0 0.0 3.1028429491964116 0.0 27 2.2448175580650121E-4 0.0 0.0 3.1773147716852184 0.0 28 2.2448175580650121E-4 0.0 0.0 3.25161823285717 0.0 29 2.2448175580650121E-4 0.0 0.0 3.334508121188721 0.0 30 2.2448175580650121E-4 0.0 0.0 3.4402951486125346 0.0 31 2.2448175580650121E-4 0.0 0.0 3.542827190577154 0.0 32 2.2448175580650121E-4 0.0 0.0 3.6364360827484647 0.0 33 2.2448175580650121E-4 0.0 0.0 3.7229176791729195 0.0 34 2.2448175580650121E-4 0.0 0.0 3.817648980123263 0.0 35 2.2448175580650121E-4 0.0 0.0 3.947006591906759 0.0 36 2.2448175580650121E-4 0.0 0.0 4.060369878589042 0.0 37 2.2448175580650121E-4 0.0 0.0 4.175641260195681 0.0 38 2.2448175580650121E-4 0.0 0.0 4.279744674450946 0.0 39 2.2448175580650121E-4 0.0 0.0 4.391873311476293 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGATA 30 2.1661763E-6 45.000004 25 CGGGTAC 45 3.8562575E-10 45.0 6 CGAAAGT 25 3.891673E-5 45.0 45 GATCACG 70 0.0 45.0 1 TACGCTA 20 7.0343324E-4 45.0 15 TACGCGA 20 7.0343324E-4 45.0 37 CGAATGT 20 7.0343324E-4 45.0 44 ACTCGTT 20 7.0343324E-4 45.0 33 CATACGT 20 7.0343324E-4 45.0 23 TTACGTC 45 3.8562575E-10 45.0 29 CGTAACA 25 3.891673E-5 45.0 40 ACGTAAG 95 0.0 45.0 1 GCGTACA 25 3.891673E-5 45.0 37 CGTTAGG 215 0.0 42.906975 2 CGTTTTT 9240 0.0 42.126625 1 GCGATAT 225 0.0 42.0 9 GTATGCG 70 0.0 41.785713 1 TTTGACG 130 0.0 41.538464 1 CGAAAGG 245 0.0 41.32653 2 CTAACGG 60 3.6379788E-12 41.250004 2 >>END_MODULE