##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547396_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2488519 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29692399374889 31.0 31.0 33.0 30.0 34.0 2 31.690875576999815 31.0 31.0 34.0 30.0 34.0 3 31.694111236442236 31.0 31.0 34.0 30.0 34.0 4 35.5198903444177 37.0 35.0 37.0 33.0 37.0 5 35.44379689285073 37.0 35.0 37.0 33.0 37.0 6 35.4839850529572 37.0 35.0 37.0 33.0 37.0 7 35.94094519672142 37.0 35.0 37.0 35.0 37.0 8 35.957114653333974 37.0 35.0 37.0 35.0 37.0 9 37.701439691639884 39.0 37.0 39.0 35.0 39.0 10 36.96538423054033 39.0 37.0 39.0 32.0 39.0 11 36.657501911779654 39.0 35.0 39.0 32.0 39.0 12 36.449108485810235 39.0 35.0 39.0 32.0 39.0 13 36.33458735898741 39.0 35.0 39.0 32.0 39.0 14 37.44402514105779 40.0 36.0 41.0 32.0 41.0 15 37.573673739280274 40.0 36.0 41.0 32.0 41.0 16 37.63990268910947 40.0 36.0 41.0 32.0 41.0 17 37.54580937497363 39.0 36.0 41.0 32.0 41.0 18 37.35245139779925 39.0 36.0 41.0 32.0 41.0 19 37.2399129763526 39.0 36.0 41.0 32.0 41.0 20 37.03207972291953 39.0 35.0 41.0 32.0 41.0 21 36.91686621641225 39.0 35.0 41.0 31.0 41.0 22 36.82110162711235 38.0 35.0 41.0 31.0 41.0 23 36.71675201193963 38.0 35.0 40.0 31.0 41.0 24 36.61038392714703 38.0 35.0 40.0 31.0 41.0 25 36.52649587967783 38.0 35.0 40.0 31.0 41.0 26 36.320794014431875 38.0 35.0 40.0 30.0 41.0 27 36.31221260516797 38.0 35.0 40.0 30.0 41.0 28 36.303942626116175 38.0 35.0 40.0 30.0 41.0 29 36.29972324904893 38.0 35.0 40.0 30.0 41.0 30 36.26761861171243 38.0 35.0 40.0 30.0 41.0 31 36.15358050310245 38.0 35.0 40.0 30.0 41.0 32 35.92072433443345 38.0 35.0 40.0 29.0 41.0 33 35.63567165852461 38.0 35.0 40.0 27.0 41.0 34 35.31365723950671 38.0 34.0 40.0 25.0 41.0 35 35.09527192679662 38.0 34.0 40.0 24.0 41.0 36 34.84176411753336 38.0 34.0 40.0 23.0 41.0 37 34.79414864825223 38.0 34.0 40.0 23.0 41.0 38 34.71100120191969 38.0 34.0 40.0 23.0 41.0 39 34.57566769632862 38.0 34.0 40.0 23.0 41.0 40 34.47154994597188 38.0 33.0 40.0 22.0 41.0 41 34.43664163303555 38.0 33.0 40.0 22.0 41.0 42 34.35056392979117 38.0 33.0 40.0 22.0 41.0 43 34.251478489816634 38.0 33.0 40.0 21.0 41.0 44 34.166742146634206 37.0 33.0 40.0 21.0 41.0 45 34.03007813080792 37.0 33.0 40.0 20.0 41.0 46 33.940131459715595 37.0 33.0 40.0 20.0 41.0 47 33.90603487455792 37.0 33.0 40.0 20.0 41.0 48 33.790052637733524 37.0 33.0 40.0 20.0 41.0 49 33.67527272245058 37.0 33.0 40.0 20.0 41.0 50 33.57951335714134 36.0 33.0 40.0 20.0 41.0 51 33.13276089111636 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 2.0 13 13.0 14 28.0 15 93.0 16 237.0 17 622.0 18 1287.0 19 2608.0 20 4462.0 21 6966.0 22 10539.0 23 15502.0 24 22756.0 25 34705.0 26 49835.0 27 57929.0 28 60112.0 29 62010.0 30 67812.0 31 78430.0 32 94497.0 33 117570.0 34 169608.0 35 224217.0 36 206763.0 37 252073.0 38 364015.0 39 583669.0 40 156.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.714895084184608 23.21682092843173 26.988140335677567 19.080143651706095 2 34.94484068636808 24.409900024874233 28.26420051444253 12.381058774315164 3 26.489892180851342 24.957856460006937 35.69564869707646 12.856602662065269 4 22.850096784473013 27.69904509469287 35.875996928293496 13.574861192540624 5 21.35539250453784 31.74719582209338 33.902292889867425 12.995118783501352 6 20.933615535987467 39.588727271119886 30.035535191814887 9.442122001077749 7 86.62586060222968 2.1769976439802146 10.28668055176593 0.9104612020241758 8 87.3445611626835 1.6831697889387223 10.011054767916178 0.9612142804615917 9 82.46672016568891 4.928674444519009 11.05175407541594 1.5528513143761409 10 34.09337039419832 39.882556653174035 17.608706222456007 8.415366730171641 11 24.349140995105927 25.080620240391976 34.70759114155849 15.862647622943607 12 25.478246298300316 23.380814050445263 33.72118115232393 17.419758498930488 13 21.48627356270939 26.23697066407771 34.898025693193425 17.37873008001948 14 17.671474479399194 29.29609940691632 34.72406680439249 18.308359309291994 15 17.25713165139587 26.913035423880626 39.149751317952564 16.680081606770937 16 21.06521991594197 25.74820606151691 37.376608336122814 15.809965686418307 17 20.53598947807913 25.1048917046645 33.667132941319714 20.691985875936652 18 20.693713811307045 25.679209200331606 35.464467018335 18.16260997002635 19 22.75236797468695 26.977089586215737 32.20666589244446 18.06387654665285 20 24.050610021462564 27.243352371430557 32.06839087826936 16.637646728837513 21 23.04961304293839 26.290858136907936 33.98941298017013 16.67011583998354 22 22.44632249140955 24.060937449141438 33.96285099691825 19.529889062530767 23 19.573690214943102 27.958717614774088 33.6854169086111 18.782175261671703 24 18.98579034357383 26.85380340676523 37.21241429139179 16.947991958269153 25 19.663542854203644 27.688315821579017 34.50425735146085 18.143883972756488 26 19.025492672549415 30.750820066071427 31.682418337975314 18.541268923403837 27 18.240969829846588 29.633569203208815 33.69494064542003 18.43052032152457 28 17.59106520786058 28.954088757208606 35.84175969723358 17.61308633769724 29 18.062671010347923 26.646290424143835 35.99104527632701 19.299993289181234 30 19.256433244029882 27.895065297873956 34.123669539995475 18.724831918100683 31 20.79208557378907 27.88333141117267 32.58488281584348 18.739700199194782 32 21.746990880921544 28.179973711271643 32.022218837790675 18.050816570016142 33 21.102591541394702 28.3831065786518 31.722442143298885 18.79185973665461 34 18.98526794450836 29.247877954719254 32.304836732209 19.46201736856339 35 19.437384243399386 28.966586150236346 32.38251345478977 19.213516151574492 36 21.67228781455958 29.46053455890833 30.364726972146887 18.5024506543852 37 19.827294868956194 31.133256366537687 30.647344866565213 18.392103897940903 38 19.87129694408602 30.792049407699924 30.042125456948494 19.294528191265567 39 19.954197657321483 30.38795363828848 30.167903078095847 19.489945626294194 40 21.609198081268417 29.36200205825232 29.827097964693056 19.201701895786208 41 19.158382957895842 28.769762256185306 30.96986601267662 21.10198877324224 42 20.280214858717173 29.607368880848405 29.541787705860393 20.570628554574025 43 20.25441638179174 29.666118683441837 29.88624961272146 20.19321532204496 44 19.801898237465736 30.589318385754737 30.1374030095812 19.47138036719832 45 19.616647491941993 30.682586711212572 29.00070282766577 20.700062969179662 46 20.031472534467287 31.05883459198021 29.27327458620971 19.636418287342792 47 19.6774467062538 30.229988197799575 30.38606496474409 19.706500131202535 48 20.164403004357208 29.079705640181974 31.363272693517715 19.392618661943107 49 20.04429140384301 28.842456095372388 31.12003565172699 19.993216849057614 50 19.178274306927133 30.031717660182622 30.742260758306443 20.0477472745838 51 18.41983123295422 30.903360593188157 30.069008916548356 20.607799257309267 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1130.0 1 1943.0 2 2756.0 3 35662.5 4 68569.0 5 44858.0 6 21147.0 7 21176.0 8 21205.0 9 22439.5 10 23674.0 11 25170.5 12 26667.0 13 26732.0 14 26797.0 15 26108.5 16 25420.0 17 24141.0 18 22862.0 19 22178.5 20 21495.0 21 21682.0 22 21869.0 23 22387.0 24 22905.0 25 25474.0 26 32133.0 27 36223.0 28 42950.0 29 49677.0 30 55707.0 31 61737.0 32 72035.5 33 82334.0 34 89775.0 35 97216.0 36 103885.0 37 110554.0 38 119295.0 39 128036.0 40 138624.5 41 149213.0 42 156902.0 43 164591.0 44 171681.0 45 178771.0 46 177690.0 47 176609.0 48 173419.5 49 170230.0 50 161262.0 51 152294.0 52 143818.0 53 135342.0 54 124156.0 55 112970.0 56 103656.5 57 94343.0 58 84805.5 59 75268.0 60 67474.5 61 59681.0 62 52334.0 63 44987.0 64 36487.0 65 27987.0 66 23430.0 67 18873.0 68 14532.0 69 10191.0 70 8089.5 71 5988.0 72 5189.5 73 4391.0 74 3714.0 75 2577.5 76 2118.0 77 1465.5 78 813.0 79 551.5 80 290.0 81 213.5 82 137.0 83 87.0 84 37.0 85 30.0 86 23.0 87 18.0 88 13.0 89 9.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2488519.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.974871873248528 #Duplication Level Percentage of deduplicated Percentage of total 1 77.24037159348494 18.518280123959062 2 6.527385797105824 3.129864763057486 3 2.8023303827764465 2.015565356207304 4 1.7171215898613947 1.6467108043086296 5 1.1237862726444003 1.3471315949782519 6 0.8661697901298209 1.2459785843304614 7 0.6620374343803397 1.1110583865193975 8 0.5544080818084055 1.0633490181480008 9 0.4879965330089203 1.0529688918130526 >10 6.33254724748675 36.08895248197583 >50 1.4810563770958531 24.392736853873707 >100 0.20308809411399364 6.135107175980066 >500 0.001190564272014377 0.1829238652722238 >1k 3.401612205755363E-4 0.09443862504914631 >5k 0.0 0.0 >10k+ 1.7008061028776815E-4 1.974933474527333 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 48433 1.9462579952172356 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0184543497558184E-5 0.0 0.0 0.020654855357744906 0.0 2 4.0184543497558184E-5 0.0 0.0 0.05320433559076704 0.0 3 4.0184543497558184E-5 0.0 0.0 0.08720045938970127 0.0 4 4.0184543497558184E-5 0.0 0.0 0.1387572286970684 0.0 5 4.0184543497558184E-5 0.0 0.0 0.25260004042565076 0.0 6 4.0184543497558184E-5 0.0 0.0 0.49869018480469707 0.0 7 4.0184543497558184E-5 0.0 0.0 0.6497438838120183 0.0 8 4.0184543497558184E-5 0.0 0.0 0.9221950887254629 0.0 9 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.0597065965741068 0.0 10 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.2177925906935008 0.0 11 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.3925149858208838 0.0 12 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.5334421798668203 0.0 13 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.622250020996424 0.0 14 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.68337071165621 0.0 15 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.7367357854209673 0.0 16 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.8072194747156842 0.0 17 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.8937769814094247 0.0 18 4.0184543497558184E-5 0.0 4.0184543497558184E-5 1.9936757565443544 0.0 19 4.0184543497558184E-5 0.0 4.0184543497558184E-5 2.0699862046462174 0.0 20 4.0184543497558184E-5 0.0 4.0184543497558184E-5 2.1476629272269974 0.0 21 4.0184543497558184E-5 0.0 4.0184543497558184E-5 2.244748784317098 0.0 22 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 2.361605436807997 0.0 23 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 2.4815161146047107 0.0 24 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 2.5788430789557966 0.0 25 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 2.6690171945643173 0.0 26 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 2.758709095650867 0.0 27 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 2.8498074557598314 0.0 28 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 2.951152874460673 0.0 29 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.063227566275363 0.0 30 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.1996942759930707 0.0 31 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.3220562109431353 0.0 32 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.4389932325210295 0.0 33 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.5617971974495672 0.0 34 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.6841993169431295 0.0 35 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.821590271161281 0.0 36 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 3.947568815026126 0.0 37 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 4.076078985131317 0.0 38 4.0184543497558184E-5 4.0184543497558184E-5 4.0184543497558184E-5 4.221667586222971 0.0 39 8.036908699511637E-5 4.0184543497558184E-5 4.0184543497558184E-5 4.433922344977073 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 21610 0.0 43.51111 1 AGGGCGA 2330 0.0 39.881973 6 TACGGGA 1135 0.0 39.845814 4 AAGGGAT 5335 0.0 39.011246 5 CGTTAGG 410 0.0 38.963417 2 ATAGGGA 4580 0.0 38.61354 4 GGGCGAT 4485 0.0 38.578594 7 ACGGGAT 1470 0.0 38.265305 5 AGGGATC 3595 0.0 37.990265 6 TAAGGGA 4425 0.0 37.98305 4 TAGGGCG 825 0.0 37.909092 5 GACCGAT 1610 0.0 37.87267 9 TAATGCG 155 0.0 37.741936 1 TAGGGAT 5280 0.0 37.329544 5 GGCGATT 1335 0.0 37.247192 8 AGGGATT 6135 0.0 37.188263 6 TATGGGA 3525 0.0 37.021275 4 AGGGATA 3345 0.0 36.860985 6 CGGGATA 820 0.0 36.768295 6 GTTTTTT 26080 0.0 36.553875 2 >>END_MODULE